Guide to the Human Genome
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Name: SLC11A2 Sequence: fasta or formatted (561aa) NCBI GI: 10835169
Description:

solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2

Referenced in:

Macrophages and Monocytes
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         43           2
 C cysteine            1.8         10           1
 D aspartate           2.9         16           2
 E glutamate           4.5         25           3
 F phenylalanine       6.6         37           2
 G glycine             8.6         48           2
 H histidine           1.6          9           1
 I isoleucine          7.0         39           2
 K lysine              3.2         18           1
 L leucine            11.9         67           3
 M methionine          2.7         15           1
 N asparagine          3.6         20           2
 P proline             3.7         21           1
 Q glutamine           3.4         19           1
 R arginine            3.2         18           1
 S serine              7.8         44           2
 T threonine           4.5         25           1
 V valine             10.3         58           3
 W tryptophan          1.4          8           1
 Y tyrosine            3.7         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 11 (proton-coupled divalent me... 
SLC11A1               0.618   natural resistance-associated macrophage protein 1 ...
CTNND2                0.006   catenin (cadherin-associated protein), delta 2 (neur...
MBOAT4                0.006   membrane bound O-acyltransferase domain containing ...
MFSD6                 0.006   major facilitator superfamily domain containing 6 [...
KCNK4                 0.006   TRAAK 
OR10C1                0.006   olfactory receptor, family 10, subfamily C, member 1...
CCR6                  0.005   chemokine (C-C motif) receptor 6 
CCR6                  0.005   chemokine (C-C motif) receptor 6 
TEX261                0.005   testis expressed sequence 261 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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