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Search of human proteins with 14249552
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens]
(478 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens] 964 0.0
gi|7661708 feline leukemia virus subgroup C cellular receptor 1 ... 157 3e-38
gi|190341091 feline leukemia virus subgroup C cellular receptor ... 130 3e-30
gi|31542731 major facilitator superfamily domain containing 7 [H... 125 6e-29
gi|166064062 tumor suppressing subtransferable candidate 5 [Homo... 42 0.002
gi|166064060 tumor suppressing subtransferable candidate 5 [Homo... 42 0.002
gi|115511036 alpha-kinase 3 [Homo sapiens] 33 0.57
gi|167466171 hyaluronan synthase 1 [Homo sapiens] 33 0.74
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 32 0.97
gi|239753576 PREDICTED: hypothetical protein [Homo sapiens] 31 2.2
gi|239748084 PREDICTED: hypothetical protein [Homo sapiens] 31 2.2
gi|239741982 PREDICTED: hypothetical protein [Homo sapiens] 31 2.2
gi|4507205 serum response factor (c-fos serum response element-b... 31 2.2
gi|191252785 centrobin, centrosomal BRCA2 interacting protein is... 31 2.2
gi|80861396 centrobin, centrosomal BRCA2 interacting protein iso... 31 2.2
gi|239752453 PREDICTED: hypothetical protein XP_002348279 [Homo ... 31 2.8
gi|239746978 PREDICTED: hypothetical protein XP_002343901 [Homo ... 31 2.8
gi|167614502 protein phosphatase 1, regulatory (inhibitor) subun... 31 2.8
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 31 2.8
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 30 3.7
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 30 3.7
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens] 30 3.7
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens] 30 3.7
gi|239757595 PREDICTED: hypothetical protein [Homo sapiens] 30 4.8
gi|169163718 PREDICTED: hypothetical protein [Homo sapiens] 30 4.8
gi|169163704 PREDICTED: hypothetical protein [Homo sapiens] 30 4.8
gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [H... 30 4.8
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H... 30 4.8
gi|22749525 major facilitator superfamily domain containing 8 [H... 30 6.3
gi|50080213 olfactory receptor, family 6, subfamily C, member 3 ... 30 6.3
>gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens]
Length = 478
Score = 964 bits (2492), Expect = 0.0
Identities = 478/478 (100%), Positives = 478/478 (100%)
Query: 1 MGSRWSSEEERQPLLGPGLGPGLGASWRSREAAAAALPAAVPGPGRVYGRRWLVLLLFSL 60
MGSRWSSEEERQPLLGPGLGPGLGASWRSREAAAAALPAAVPGPGRVYGRRWLVLLLFSL
Sbjct: 1 MGSRWSSEEERQPLLGPGLGPGLGASWRSREAAAAALPAAVPGPGRVYGRRWLVLLLFSL 60
Query: 61 LAFVQGLVWNTWGPIQNSARQAYGFSSWDIALLVLWGPIGFLPCFAFMWLLDKRGLRITV 120
LAFVQGLVWNTWGPIQNSARQAYGFSSWDIALLVLWGPIGFLPCFAFMWLLDKRGLRITV
Sbjct: 61 LAFVQGLVWNTWGPIQNSARQAYGFSSWDIALLVLWGPIGFLPCFAFMWLLDKRGLRITV 120
Query: 121 LLTSFLMVLGTGLRCIPISDLILKRRLIHGGQMLNGLAGPTVMNAAPFLSTTWFSADERA 180
LLTSFLMVLGTGLRCIPISDLILKRRLIHGGQMLNGLAGPTVMNAAPFLSTTWFSADERA
Sbjct: 121 LLTSFLMVLGTGLRCIPISDLILKRRLIHGGQMLNGLAGPTVMNAAPFLSTTWFSADERA 180
Query: 181 TATAIASMLSYLGGACAFLVGPLVVPAPNGTSPLLAAESSRAHIKDRIEAVLYAEFGVVC 240
TATAIASMLSYLGGACAFLVGPLVVPAPNGTSPLLAAESSRAHIKDRIEAVLYAEFGVVC
Sbjct: 181 TATAIASMLSYLGGACAFLVGPLVVPAPNGTSPLLAAESSRAHIKDRIEAVLYAEFGVVC 240
Query: 241 LIFSATLAYFPPRPPLPPSVAAASQRLSYRRSVCRLLSNFRFLMIALAYAIPLGVFAGWS 300
LIFSATLAYFPPRPPLPPSVAAASQRLSYRRSVCRLLSNFRFLMIALAYAIPLGVFAGWS
Sbjct: 241 LIFSATLAYFPPRPPLPPSVAAASQRLSYRRSVCRLLSNFRFLMIALAYAIPLGVFAGWS 300
Query: 301 GVLDLILTPAHVSQVDAGWIGFWSIVGGCVVGIAMARFADFIRGMLKLILLLLFSGATLS 360
GVLDLILTPAHVSQVDAGWIGFWSIVGGCVVGIAMARFADFIRGMLKLILLLLFSGATLS
Sbjct: 301 GVLDLILTPAHVSQVDAGWIGFWSIVGGCVVGIAMARFADFIRGMLKLILLLLFSGATLS 360
Query: 361 STWFTLTCLNSITHLPLTTVTLYASCILLGVFLNSSVPIFFELFVETVYPVPEGITCGVV 420
STWFTLTCLNSITHLPLTTVTLYASCILLGVFLNSSVPIFFELFVETVYPVPEGITCGVV
Sbjct: 361 STWFTLTCLNSITHLPLTTVTLYASCILLGVFLNSSVPIFFELFVETVYPVPEGITCGVV 420
Query: 421 TFLSNMFMGVLLFFLTFYHTELSWFNWCLPGSCLLSLLLILCFRESYDRLYLDVVVSV 478
TFLSNMFMGVLLFFLTFYHTELSWFNWCLPGSCLLSLLLILCFRESYDRLYLDVVVSV
Sbjct: 421 TFLSNMFMGVLLFFLTFYHTELSWFNWCLPGSCLLSLLLILCFRESYDRLYLDVVVSV 478
>gi|7661708 feline leukemia virus subgroup C cellular receptor 1
[Homo sapiens]
Length = 555
Score = 157 bits (396), Expect = 3e-38
Identities = 128/432 (29%), Positives = 203/432 (46%), Gaps = 37/432 (8%)
Query: 8 EEERQPLLGPGLGPGLGASWRSREAAAAALPAAVPGPGRVYGRRWLVLLLFSLLAFVQGL 67
EEE Q L P G GA E++ L A P RR++VLL+FSL + V
Sbjct: 74 EEETQARLLPA---GAGAETPGAESSPLPLTALSP-------RRFVVLLIFSLYSLVNAF 123
Query: 68 VWNTWGPIQNSARQAYGFSSWDIALLVLWGPIGFLPC-FAFMWLLDKRGLRITVLLTSFL 126
W + I N YG + I L + + ++P F WLLD RGLR+T LL S L
Sbjct: 124 QWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLGSGL 183
Query: 127 MVLGTGLRCIPISDLILKRRLIHGGQMLNGLAGPTVMNAAPFLSTTWFSADERATATAIA 186
LG ++C + + ++ GQ L +A ++ +++ WF E +TA A A
Sbjct: 184 NCLGAWIKCGSVQQHLFWVTML--GQCLCSVAQVFILGLPSRIASVWFGPKEVSTACATA 241
Query: 187 SMLSYLGGACAFLVGPLVVPAPNGTSPLLAAESSRAHIKDRIEAVLYAEFGVVCLIFSAT 246
+ + LG A FL+ P++VP + LLA I + Y V L+F T
Sbjct: 242 VLGNQLGTAVGFLLPPVLVPNTQNDTNLLAC---------NISTMFYGTSAVATLLFILT 292
Query: 247 LAYFPPRPPLPPSVAAAS------QRLSYRRSVCRLLSNFRFLMIALAYAIPLGVFAGWS 300
F +P PPS A A+ + SY++S+ L N F+++ + Y I G F S
Sbjct: 293 AIAFKEKPRYPPSQAQAALQDSPPEEYSYKKSIRNLFKNIPFVLLLITYGIMTGAFYSVS 352
Query: 301 GVLD-LILTPAHVSQVDAGWIGFWSIVGGCVVGIAMARFADFIRGMLKLILLLLFSGATL 359
+L+ +ILT +V+AG IG +V G V I + D+ + K L+++ + +
Sbjct: 353 TLLNQMILTYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTK-TYKQTTLIVYILSFI 411
Query: 360 SSTWFTLTCLNSITHLPLTTVTLYASCILLGVFLNSSVPIFFELFVETVYPVPEGITCGV 419
FT T + ++ + ++ + +LG F+ +P+ FE VE YP EG + G+
Sbjct: 412 GMVIFTFTL--DLRYI----IIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESEGTSSGL 465
Query: 420 VTFLSNMFMGVL 431
+ + +F G+L
Sbjct: 466 LNASAQIF-GIL 476
>gi|190341091 feline leukemia virus subgroup C cellular receptor
family, member 2 [Homo sapiens]
Length = 526
Score = 130 bits (327), Expect = 3e-30
Identities = 102/390 (26%), Positives = 177/390 (45%), Gaps = 27/390 (6%)
Query: 46 RVYGRRWLVLLLFSLLAFVQGLVWNTWGPIQNSARQAYGFSSWDIALLVLWGPIGFLPCF 105
+V RRW V+L+FS + W +G I N YG S++ I L + + ++P
Sbjct: 79 KVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLL 138
Query: 106 A-FMWLLDKRGLRITVLLTSFLMVLGTGLRCIPISDLILKRRLIHGGQMLNGLAGPTVMN 164
WLL+K GLR L S L LG ++ + + ++ GQ++ +A ++
Sbjct: 139 LPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVV--GQLICSVAQVFILG 196
Query: 165 AAPFLSTTWFSADERATATAIASMLSYLGGACAFLVGPLVVPAPNGTSPLLAAESSRAHI 224
+++ WF A+E +TA ++A + LG A FLV P++VP R +
Sbjct: 197 MPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVP----------NIEDRDEL 246
Query: 225 KDRIEAVLYAEFGVVCLIFSATLAYFPPRPPLPP------SVAAASQRLSYRRSVCRLLS 278
I + Y GV L+ + F +P PP S A S SY S+ RL
Sbjct: 247 AYHISIMFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGSIARLFK 306
Query: 279 NFRFLMIALAYAIPLGVFAGWSGVLD-LILTPAHVSQVDAGWIGFWSIVGGCVVGIAMAR 337
N F+++ + Y + G F S +L+ +++ +V+AG IG ++ G + +
Sbjct: 307 NLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLGAVISGI 366
Query: 338 FADFIRGMLKLILLLLFSGATLSSTWFTLTCLNSITHLPLTTVTLYASCILLGVFLNSSV 397
+ D + K L+++ + +T T ++ HL + +T +G F+ +
Sbjct: 367 WLDRSK-TYKETTLVVYIMTLVGMVVYTFTL--NLGHLWVVFITAGT----MGFFMTGYL 419
Query: 398 PIFFELFVETVYPVPEGITCGVVTFLSNMF 427
P+ FE VE YP EGI+ G++ + +F
Sbjct: 420 PLGFEFAVELTYPESEGISSGLLNISAQVF 449
>gi|31542731 major facilitator superfamily domain containing 7 [Homo
sapiens]
Length = 559
Score = 125 bits (315), Expect = 6e-29
Identities = 116/397 (29%), Positives = 185/397 (46%), Gaps = 39/397 (9%)
Query: 46 RVYGRRWLVLLLFSLLAFVQGLVWNTWGPIQNSARQAYGFS----SW-DIALLVLWGPIG 100
R Y RRW+ LL SLL +W ++ P+ + + S +W + LV+ P G
Sbjct: 24 RTYARRWVFLLAISLLNCSNATLWLSFAPVADVIAEDLVLSMEQINWLSLVYLVVSTPFG 83
Query: 101 FLPCFAFMWLLDKRGLRITVLLTSFLMVLGTGLRCIPISDLILKR--RLIHGGQMLNGLA 158
A +W+LD GLR +L ++L G+ LR +P + + + GGQ L LA
Sbjct: 84 V----AAIWILDSVGLRAATILGAWLNFAGSVLRMVPCMVVGTQNPFAFLMGGQSLCALA 139
Query: 159 GPTVMNAAPFLSTTWFSADERATATAIASMLSYLGGACAFLVGPLVVPAPNGTSPLLAAE 218
V+ + L+ WF +RATA +A+M + LG A ++ P++V +L
Sbjct: 140 QSLVIFSPAKLAALWFPEHQRATANMLATMSNPLGVLVANVLSPVLVKKGEDIPLMLGVY 199
Query: 219 SSRAHIKDRIEAVLYAEFGVVCLIFSATLAYFPPRPPLPPSVAAASQRLSYRRSVCRLLS 278
+ A GVVCL+ +T+ + PP PPS AAS +LL
Sbjct: 200 TIPA--------------GVVCLL--STICLWESVPPTPPSAGAASSTSEKFLDGLKLLM 243
Query: 279 -NFRFLMIALAYAIPLGVFAGWSGVLDLILTPAHVSQVDAGWIGFWSIVGGCVVGIAMAR 337
N ++++A+ +G+ A +S +L+ IL + S +G G I G + +A+
Sbjct: 244 WNKAYVILAVCLGGMIGISASFSALLEQILCASGHSSGFSGLCGALFITFGILGALALGP 303
Query: 338 FADFIRGMLKL--ILLLLFSGATLSSTWFTLTCLNSITHLPLTTVTLYASCILLGVFLNS 395
+ D + + I L LFS L+ F L ++ L T+ L A+C LLG+F S
Sbjct: 304 YVDRTKHFTEATKIGLCLFS---LACVPFAL-----VSQLQGQTLALAATCSLLGLFGFS 355
Query: 396 SVPIFFELFVETVYPVPEGITCGVVTFLSNMFMGVLL 432
P+ EL VE +PV EG G++ F+ G+L+
Sbjct: 356 VGPVAMELAVECSFPVGEGAATGMI-FVLGQAEGILI 391
>gi|166064062 tumor suppressing subtransferable candidate 5 [Homo
sapiens]
Length = 424
Score = 41.6 bits (96), Expect = 0.002
Identities = 81/363 (22%), Positives = 138/363 (38%), Gaps = 34/363 (9%)
Query: 42 PGPGRVYGRRWLVLLLFSLLAFVQGLVWNTWGPIQNSARQ------AYGFSSWDIALL-V 94
PG GR ++LL + L A ++ + + +R+ A+G+ +L +
Sbjct: 14 PGRMSALGRSSVILLTYVLAATELTCLFMQFSIVPYLSRKLGLDSIAFGYLQTTFGVLQL 73
Query: 95 LWGPIGFLPCFAFMWLLDKRGLRITVLLTSFLMVLGTGLRCIPISDLILKRRLIHGGQML 154
L GP+ F D+RG R + L SFL L L S L + L
Sbjct: 74 LGGPV-------FGRFADQRGARAALTL-SFLAALALYLLLAAASSPALPGVYLLFASRL 125
Query: 155 NGLAGPTVMNAAPFLSTTWFSADERATATAIASMLSYLGGACAFLVGPLVVPAPNGTSPL 214
G T + AA + T + +ER A + +G L+G +V A P
Sbjct: 126 PGALMHT-LPAAQMVITDLSAPEERPAALGRLGLCFGVGVILGSLLGGTLVSAYGIQCPA 184
Query: 215 LAAESSRAHIKDRIEAVLYAEFGVVCLIFSATLAYFPPRPPLPPSVAAASQRLSYRRSVC 274
+ A + +L A C+ S A + PLP A+ L S+
Sbjct: 185 ILAA---------LATLLGAVLSFTCIPASTKGAKTDAQAPLPGGPRASVFDLKAIASLL 235
Query: 275 RLLSNFRFLMIALAYAIPLGVFAGWSGVLDLILTPAHVSQVDAGWI-GFWSIVGGCVVGI 333
RL R ++ +A P G+F ++ + +Q AG++ F+ ++ G+
Sbjct: 236 RLPDVPRIFLVKVASNCPTGLFMVMFSIISMDFFQLEAAQ--AGYLMSFFGLLQMVTQGL 293
Query: 334 AMARFAD-FIRGMLKLILLLLFSGATLSSTWFTLTCLNSITHLPLTTVTLYASCILLGVF 392
+ + + F +L +L+F L+ W ++S+ H L L S L V
Sbjct: 294 VIGQLSSHFSEEVLLRASVLVFIVVGLAMAW-----MSSVFHFCLLVPGLVFSLCTLNVV 348
Query: 393 LNS 395
+S
Sbjct: 349 TDS 351
>gi|166064060 tumor suppressing subtransferable candidate 5 [Homo
sapiens]
Length = 424
Score = 41.6 bits (96), Expect = 0.002
Identities = 81/363 (22%), Positives = 138/363 (38%), Gaps = 34/363 (9%)
Query: 42 PGPGRVYGRRWLVLLLFSLLAFVQGLVWNTWGPIQNSARQ------AYGFSSWDIALL-V 94
PG GR ++LL + L A ++ + + +R+ A+G+ +L +
Sbjct: 14 PGRMSALGRSSVILLTYVLAATELTCLFMQFSIVPYLSRKLGLDSIAFGYLQTTFGVLQL 73
Query: 95 LWGPIGFLPCFAFMWLLDKRGLRITVLLTSFLMVLGTGLRCIPISDLILKRRLIHGGQML 154
L GP+ F D+RG R + L SFL L L S L + L
Sbjct: 74 LGGPV-------FGRFADQRGARAALTL-SFLAALALYLLLAAASSPALPGVYLLFASRL 125
Query: 155 NGLAGPTVMNAAPFLSTTWFSADERATATAIASMLSYLGGACAFLVGPLVVPAPNGTSPL 214
G T + AA + T + +ER A + +G L+G +V A P
Sbjct: 126 PGALMHT-LPAAQMVITDLSAPEERPAALGRLGLCFGVGVILGSLLGGTLVSAYGIQCPA 184
Query: 215 LAAESSRAHIKDRIEAVLYAEFGVVCLIFSATLAYFPPRPPLPPSVAAASQRLSYRRSVC 274
+ A + +L A C+ S A + PLP A+ L S+
Sbjct: 185 ILAA---------LATLLGAVLSFTCIPASTKGAKTDAQAPLPGGPRASVFDLKAIASLL 235
Query: 275 RLLSNFRFLMIALAYAIPLGVFAGWSGVLDLILTPAHVSQVDAGWI-GFWSIVGGCVVGI 333
RL R ++ +A P G+F ++ + +Q AG++ F+ ++ G+
Sbjct: 236 RLPDVPRIFLVKVASNCPTGLFMVMFSIISMDFFQLEAAQ--AGYLMSFFGLLQMVTQGL 293
Query: 334 AMARFAD-FIRGMLKLILLLLFSGATLSSTWFTLTCLNSITHLPLTTVTLYASCILLGVF 392
+ + + F +L +L+F L+ W ++S+ H L L S L V
Sbjct: 294 VIGQLSSHFSEEVLLRASVLVFIVVGLAMAW-----MSSVFHFCLLVPGLVFSLCTLNVV 348
Query: 393 LNS 395
+S
Sbjct: 349 TDS 351
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 33.1 bits (74), Expect = 0.57
Identities = 23/44 (52%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 11 RQPLLGP---GLGPGLGASWRSREAAAAALPAAVPGPGRVYGRR 51
RQP G G GPG GA WR+ EAAA+A PA G G G R
Sbjct: 166 RQPRAGAAAAGRGPGAGA-WRTGEAAASAGPAV--GEGGAMGSR 206
>gi|167466171 hyaluronan synthase 1 [Homo sapiens]
Length = 578
Score = 32.7 bits (73), Expect = 0.74
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 20/91 (21%)
Query: 319 WIGFWSIVGGCVVGIAMAR--FADFIRGMLKLILLLLFSG----ATLSSTWFTLTCLN-- 370
W W ++ CV G+A+A+ FA ++RG L+++LL L++ L + + L +N
Sbjct: 429 WALLWVLL--CVQGVALAKAAFAAWLRGCLRMVLLSLYAPLYMCGLLPAKFLALVTMNQS 486
Query: 371 ----------SITHLPLTTVTLYASCILLGV 391
+ ++PL + L+A +L G+
Sbjct: 487 GWGTSGRRKLAANYVPLLPLALWALLLLGGL 517
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 32.3 bits (72), Expect = 0.97
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 11/33 (33%)
Query: 13 PLLGPGLGPGLGASWRSREAAAAALPAAVPGPG 45
P+LGPG GPG G ++PA +PGPG
Sbjct: 304 PILGPGSGPGSG-----------SVPAPIPGPG 325
>gi|239753576 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 31.2 bits (69), Expect = 2.2
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 17 PGLGPGL-GASWRSREAAAAALPAAVPGPGRVYGRR 51
PG GP GA+ RSR AA+PAA G R GRR
Sbjct: 281 PGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRGRR 316
>gi|239748084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 31.2 bits (69), Expect = 2.2
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 17 PGLGPGL-GASWRSREAAAAALPAAVPGPGRVYGRR 51
PG GP GA+ RSR AA+PAA G R GRR
Sbjct: 281 PGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRGRR 316
>gi|239741982 PREDICTED: hypothetical protein [Homo sapiens]
Length = 423
Score = 31.2 bits (69), Expect = 2.2
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 17 PGLGPGL-GASWRSREAAAAALPAAVPGPGRVYGRR 51
PG GP GA+ RSR AA+PAA G R GRR
Sbjct: 281 PGRGPDASGAAGRSRAPPPAAVPAAWEGTDRRRGRR 316
>gi|4507205 serum response factor (c-fos serum response
element-binding transcription factor) [Homo sapiens]
Length = 508
Score = 31.2 bits (69), Expect = 2.2
Identities = 16/32 (50%), Positives = 17/32 (53%)
Query: 17 PGLGPGLGASWRSREAAAAALPAAVPGPGRVY 48
PG G GLG REAAAAA P G +Y
Sbjct: 45 PGNGAGLGPGRLEREAAAAAATTPAPTAGALY 76
>gi|191252785 centrobin, centrosomal BRCA2 interacting protein
isoform alpha [Homo sapiens]
Length = 903
Score = 31.2 bits (69), Expect = 2.2
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 218 ESSRAHIKDRIEAVLYAEFGVVCLIFSATLAYFPPRPPLPPS 259
E R + +R++A+L A + + S TL PP PP PP+
Sbjct: 543 EEQRVELVERLQAMLQAHWDEANQLLSTTLP--PPNPPAPPA 582
>gi|80861396 centrobin, centrosomal BRCA2 interacting protein
isoform beta [Homo sapiens]
Length = 925
Score = 31.2 bits (69), Expect = 2.2
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 218 ESSRAHIKDRIEAVLYAEFGVVCLIFSATLAYFPPRPPLPPS 259
E R + +R++A+L A + + S TL PP PP PP+
Sbjct: 543 EEQRVELVERLQAMLQAHWDEANQLLSTTLP--PPNPPAPPA 582
>gi|239752453 PREDICTED: hypothetical protein XP_002348279 [Homo
sapiens]
Length = 103
Score = 30.8 bits (68), Expect = 2.8
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 20 GPGLGASWRSREAAAAALPA-AVPGPGRVYGRR 51
GP LGASWR R A+LPA + P PGR RR
Sbjct: 58 GPDLGASWRLR--FPASLPAFSNPAPGRRGARR 88
>gi|239746978 PREDICTED: hypothetical protein XP_002343901 [Homo
sapiens]
Length = 103
Score = 30.8 bits (68), Expect = 2.8
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 20 GPGLGASWRSREAAAAALPA-AVPGPGRVYGRR 51
GP LGASWR R A+LPA + P PGR RR
Sbjct: 58 GPDLGASWRLR--FPASLPAFSNPAPGRRGARR 88
>gi|167614502 protein phosphatase 1, regulatory (inhibitor) subunit 3A
[Homo sapiens]
Length = 1122
Score = 30.8 bits (68), Expect = 2.8
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 20/98 (20%)
Query: 352 LLFSGATLSSTWFTLTCLNSITHLPLTTVTLYASCILLGVFLNSSVPIF--FELFVETVY 409
L+ SG +L ++ + ++ T LP+ + L + NS +P F F +F+ TVY
Sbjct: 1031 LVSSGQSLYTSGEKESDSSASTSLPVEESQAQGNESLFSKYTNSKIPYFLLFLIFLITVY 1090
Query: 410 PVPEGITCGVVTFLSNMFMGVLLFFLTFYHTELSWFNW 447
L+ LTFY LSW +W
Sbjct: 1091 HYD------------------LMIGLTFYVLSLSWLSW 1110
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 30.8 bits (68), Expect = 2.8
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 3 SRWS-SEEERQPLLGPGLGPGLGASWRSREAAAAALPA-AVPGP 44
+RW S+ E QPLLGPG G G A AA P A P P
Sbjct: 1059 ARWPRSDPESQPLLGPGAGGAGGTGGAGGGAPAAPPPCRAAPPP 1102
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 30.4 bits (67), Expect = 3.7
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 10 ERQPLL----------GPGLGPGLGASWRSREAAAAALPAAVPGPGR 46
E+QPLL GPG GPG GA + R + PAA PGP R
Sbjct: 637 EQQPLLRHPAPPGPGPGPGPGPGPGADMQ-RSYDSYYYPAAGPGPRR 682
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 30.4 bits (67), Expect = 3.7
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 10 ERQPLL----------GPGLGPGLGASWRSREAAAAALPAAVPGPGR 46
E+QPLL GPG GPG GA + R + PAA PGP R
Sbjct: 645 EQQPLLRHPAPPGPGPGPGPGPGPGADMQ-RSYDSYYYPAAGPGPRR 690
>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
Length = 858
Score = 30.4 bits (67), Expect = 3.7
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 10 ERQPLL----------GPGLGPGLGASWRSREAAAAALPAAVPGPGR 46
E+QPLL GPG GPG GA + R + PAA PGP R
Sbjct: 651 EQQPLLRHPAPPGPGPGPGPGPGPGADMQ-RSYDSYYYPAAGPGPRR 696
>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
Length = 850
Score = 30.4 bits (67), Expect = 3.7
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 10 ERQPLL----------GPGLGPGLGASWRSREAAAAALPAAVPGPGR 46
E+QPLL GPG GPG GA + R + PAA PGP R
Sbjct: 643 EQQPLLRHPAPPGPGPGPGPGPGPGADMQ-RSYDSYYYPAAGPGPRR 688
>gi|239757595 PREDICTED: hypothetical protein [Homo sapiens]
Length = 612
Score = 30.0 bits (66), Expect = 4.8
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 194 GACAFLVGPLVVPAPNGTSPLLAAESSRAHIKDRIEAVLYAEFGVV----CLIFSATLAY 249
GA A + GP P +SP L +E RAH D ++ E + CL+F
Sbjct: 69 GASAAVCGPPTSPLNATSSPQLFSEGKRAH-GDEVDQETRREADTLWKPPCLLFPILPGP 127
Query: 250 FPPRPPLPPSVAAASQR 266
P +P P + A R
Sbjct: 128 SPHQPEAGPPILPAEPR 144
>gi|169163718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 30.0 bits (66), Expect = 4.8
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 14/106 (13%)
Query: 246 TLAYFPPRP------PLPPSVAAASQRLSYRRSVCRLLSNFRFLMIALAYAIPLGVFAGW 299
++ Y PP P P P S ++ L RS+ +S F F + + L F GW
Sbjct: 94 SIPYHPPNPAGFKAQPQPSSRSSYPALLQTLRSLSSCVSGFCFSPL---HWHCLAGFLGW 150
Query: 300 SGV-LDLILTPAHVSQVDAGWIGFWSIVGGCVVGIAMARFADFIRG 344
V LD L VS A +W+ + C + A+ I G
Sbjct: 151 KEVCLDAFL----VSPSKASQSAYWTTIRDCSINTCCAKVQRIISG 192
>gi|169163704 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 30.0 bits (66), Expect = 4.8
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 14/106 (13%)
Query: 246 TLAYFPPRP------PLPPSVAAASQRLSYRRSVCRLLSNFRFLMIALAYAIPLGVFAGW 299
++ Y PP P P P S ++ L RS+ +S F F + + L F GW
Sbjct: 94 SIPYHPPNPAGFKAQPQPSSRSSYPALLQTLRSLSSCVSGFCFSPL---HWHCLAGFLGW 150
Query: 300 SGV-LDLILTPAHVSQVDAGWIGFWSIVGGCVVGIAMARFADFIRG 344
V LD L VS A +W+ + C + A+ I G
Sbjct: 151 KEVCLDAFL----VSPSKASQSAYWTTIRDCSINTCCAKVQRIISG 192
>gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [Homo
sapiens]
Length = 533
Score = 30.0 bits (66), Expect = 4.8
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 1/89 (1%)
Query: 4 RWSSEEERQPLLGPGLGPGLGASWRSREAAA-AALPAAVPGPGRVYGRRWLVLLLFSLLA 62
R S RQP GP A RS AAA A PA P P W + +L
Sbjct: 62 RASRRTPRQPPRGPSAAAKPKAGLRSEAAAAPAPAPAPTPTPEEGPDAGWGDRIPLEILV 121
Query: 63 FVQGLVWNTWGPIQNSARQAYGFSSWDIA 91
+ GL+ GP+ R A W A
Sbjct: 122 QIFGLLVAADGPMPFLGRAARVCRRWQEA 150
>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
sapiens]
Length = 539
Score = 30.0 bits (66), Expect = 4.8
Identities = 28/89 (31%), Positives = 33/89 (37%), Gaps = 1/89 (1%)
Query: 4 RWSSEEERQPLLGPGLGPGLGASWRSREAAA-AALPAAVPGPGRVYGRRWLVLLLFSLLA 62
R S RQP GP A RS AAA A PA P P W + +L
Sbjct: 62 RASRRTPRQPPRGPSAAAKPKAGLRSEAAAAPAPAPAPTPTPEEGPDAGWGDRIPLEILV 121
Query: 63 FVQGLVWNTWGPIQNSARQAYGFSSWDIA 91
+ GL+ GP+ R A W A
Sbjct: 122 QIFGLLVAADGPMPFLGRAARVCRRWQEA 150
>gi|22749525 major facilitator superfamily domain containing 8 [Homo
sapiens]
Length = 518
Score = 29.6 bits (65), Expect = 6.3
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 292 PLGVFAGW---SGVLDLILTPAHVSQVDAGWIGFW--SIVGGCVV 331
P GV+ GW SG IL P +SQV A W W S+V G +V
Sbjct: 449 PQGVYMGWLTASGSGARILGPMFISQVYAHWGPRWAFSLVCGIIV 493
>gi|50080213 olfactory receptor, family 6, subfamily C, member 3
[Homo sapiens]
Length = 311
Score = 29.6 bits (65), Expect = 6.3
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 381 TLYASCILLGVFLNSS--VPIFFELFVETVYPVPEGITCGVVTFLSNMFMGVLLFFL-TF 437
T+ +LLG+ + + IF LF+ + V +T +TF+ + + FFL F
Sbjct: 4 TMVTEFVLLGLSDDPDLQIVIFLFLFITYILSVTGNLTIITLTFVDSHLQTPMYFFLRNF 63
Query: 438 YHTELSWFNWCLP 450
E+S+ C+P
Sbjct: 64 SFLEISFTTVCIP 76
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.142 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,911,279
Number of Sequences: 37866
Number of extensions: 861979
Number of successful extensions: 4311
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 4277
Number of HSP's gapped (non-prelim): 37
length of query: 478
length of database: 18,247,518
effective HSP length: 106
effective length of query: 372
effective length of database: 14,233,722
effective search space: 5294944584
effective search space used: 5294944584
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.