Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: OR6C3 Sequence: fasta or formatted (311aa) NCBI GI: 50080213
Description:

olfactory receptor, family 6, subfamily C, member 3

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         19           2
 C cysteine            3.2         10           1
 D aspartate           2.9          9           2
 E glutamate           1.6          5           1
 F phenylalanine       9.0         28           3
 G glycine             2.6          8           1
 H histidine           1.9          6           1
 I isoleucine          9.6         30           2
 K lysine              3.5         11           2
 L leucine            13.8         43           3
 M methionine          3.5         11           1
 N asparagine          4.5         14           2
 P proline             3.5         11           2
 Q glutamine           3.2         10           2
 R arginine            2.9          9           1
 S serine              7.7         24           2
 T threonine           8.0         25           2
 V valine              6.4         20           2
 W tryptophan          0.6          2           1
 Y tyrosine            5.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 6, subfamily C, member 3 ... 
OR6C1                 0.768   olfactory receptor, family 6, subfamily C, member 1 ...
OR6C75                0.742   olfactory receptor, family 6, subfamily C, member 75...
OR6C76                0.720   olfactory receptor, family 6, subfamily C, member 76...
OR6C74                0.711   olfactory receptor, family 6, subfamily C, member 74...
OR6C2                 0.691   olfactory receptor, family 6, subfamily C, member 2 ...
OR6C4                 0.688   olfactory receptor, family 6, subfamily C, member 4 ...
OR6C70                0.678   olfactory receptor, family 6, subfamily C, member 70...
OR6C6                 0.673   olfactory receptor, family 6, subfamily C, member 6 ...
OR6C65                0.648   olfactory receptor, family 6, subfamily C, member 65...
OR6C68                0.624   olfactory receptor, family 6, subfamily C, member 68...
OR6T1                 0.463   olfactory receptor, family 6, subfamily T, member 1 ...
OR6M1                 0.458   olfactory receptor, family 6, subfamily M, member 1 ...
OR6X1                 0.453   olfactory receptor, family 6, subfamily X, member 1 ...
OR6F1                 0.438   olfactory receptor, family 6, subfamily F, member 1 ...
OR8J3                 0.433   olfactory receptor, family 8, subfamily J, member 3 ...
OR10A7                0.430   olfactory receptor, family 10, subfamily A, member 7...
OR5B12                0.424   olfactory receptor, family 5, subfamily B, member 12...
OR5A2                 0.421   olfactory receptor, family 5, subfamily A, member 2 ...
OR5AR1                0.419   olfactory receptor, family 5, subfamily AR, member 1...
OR5B21                0.418   olfactory receptor, family 5, subfamily B, member 21...
OR2B2                 0.418   olfactory receptor, family 2, subfamily B, member 2 ...
OR2B6                 0.413   olfactory receptor, family 2, subfamily B, member 6 ...
OR8J1                 0.411   olfactory receptor, family 8, subfamily J, member 1 ...
OR8K1                 0.409   olfactory receptor, family 8, subfamily K, member 1 ...
OR2D3                 0.409   olfactory receptor, family 2, subfamily D, member 3 ...
OR6V1                 0.408   olfactory receptor, family 6, subfamily V, member 1 ...
OR2C3                 0.408   olfactory receptor, family 2, subfamily C, member 3...
OR5M1                 0.404   olfactory receptor, family 5, subfamily M, member 1 ...
OR9A4                 0.404   olfactory receptor, family 9, subfamily A, member 4 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press