Guide to the Human Genome
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Name: HAS1 Sequence: fasta or formatted (578aa) NCBI GI: 167466171
Description:

hyaluronan synthase 1

Referenced in:

N-Acetyl Sugars and Hyaluronan

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.0         81           4
 C cysteine            2.6         15           1
 D aspartate           4.0         23           2
 E glutamate           3.5         20           1
 F phenylalanine       3.6         21           2
 G glycine             7.1         41           2
 H histidine           1.9         11           2
 I isoleucine          0.9          5           1
 K lysine              1.6          9           1
 L leucine            13.7         79           4
 M methionine          2.4         14           1
 N asparagine          1.9         11           2
 P proline             4.0         23           1
 Q glutamine           2.9         17           2
 R arginine            9.2         53           3
 S serine              5.5         32           2
 T threonine           3.8         22           1
 V valine              8.3         48           2
 W tryptophan          3.6         21           2
 Y tyrosine            5.5         32           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hyaluronan synthase 1 
HAS2                  0.511   hyaluronan synthase 2 
HAS3                  0.511   hyaluronan synthase 3 isoform a 
HAS3                  0.175   hyaluronan synthase 3 isoform b 
DIRC2                 0.007   disrupted in renal carcinoma 2 
GPR162                0.006   G protein-coupled receptor 162 isoform 2 
SGPP2                 0.005   sphingosine-1-phosphate phosphotase 2 
LOC100292202          0.004   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.004   PREDICTED: similar to solute carrier family 25, mem...
CCRL2                 0.004   chemokine (C-C motif) receptor-like 2 isoform 2 [Ho...
CCRL2                 0.004   chemokine (C-C motif) receptor-like 2 isoform 1 [Hom...
ELF5                  0.004   E74-like factor 5 ESE-2a 
ELF5                  0.004   E74-like factor 5 ESE-2b 
SLC25A25              0.004   solute carrier family 25, member 25 isoform c 
SLC25A25              0.004   solute carrier family 25, member 25 isoform a 
SLC25A25              0.004   solute carrier family 25, member 25 isoform d 
SLC25A25              0.004   solute carrier family 25, member 25 isoform b 
LOC100293849          0.004   PREDICTED: hypothetical protein 
LOC100289957          0.004   PREDICTED: hypothetical protein XP_002346538 
LOC100287670          0.004   PREDICTED: hypothetical protein XP_002342378 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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