Guide to the Human Genome
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Name: NOL6 Sequence: fasta or formatted (699aa) NCBI GI: 22212931
Description:

nucleolar protein family 6 gamma isoform

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [1146aa] nucleolar protein family 6 alpha isoform
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         51           2
 C cysteine            1.4         10           1
 D aspartate           4.7         33           2
 E glutamate           6.3         44           2
 F phenylalanine       3.1         22           2
 G glycine             6.9         48           2
 H histidine           3.3         23           2
 I isoleucine          2.1         15           1
 K lysine              4.1         29           3
 L leucine            15.0        105           3
 M methionine          1.9         13           2
 N asparagine          2.0         14           2
 P proline             7.2         50           3
 Q glutamine           4.6         32           1
 R arginine            7.3         51           2
 S serine              6.6         46           2
 T threonine           5.3         37           2
 V valine              7.9         55           2
 W tryptophan          1.3          9           1
 Y tyrosine            1.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar protein family 6 gamma isoform 
NOL6                  0.937   nucleolar protein family 6 alpha isoform 
MEOX1                 0.007   mesenchyme homeobox 1 isoform 3 
MEOX1                 0.007   mesenchyme homeobox 1 isoform 1 
FAM83G                0.006   hypothetical protein LOC644815 
LPHN1                 0.006   latrophilin 1 isoform 1 precursor 
LPHN1                 0.006   latrophilin 1 isoform 2 precursor 
GIGYF2                0.005   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.005   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.005   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.005   GRB10 interacting GYF protein 2 isoform b 
AGAP2                 0.005   centaurin, gamma 1 isoform PIKE-L 
NOS1AP                0.005   nitric oxide synthase 1 (neuronal) adaptor protein i...
NOS1AP                0.005   nitric oxide synthase 1 (neuronal) adaptor protein ...
TRIM29                0.004   tripartite motif protein TRIM29 
EVPL                  0.004   envoplakin 
HPS5                  0.004   Hermansky-Pudlak syndrome 5 isoform a 
HPS5                  0.004   Hermansky-Pudlak syndrome 5 isoform b 
HPS5                  0.004   Hermansky-Pudlak syndrome 5 isoform b 
RYR1                  0.004   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.004   skeletal muscle ryanodine receptor isoform 1 
MYO9B                 0.004   myosin IXB isoform 2 
MYO9B                 0.004   myosin IXB isoform 1 
ZNF609                0.004   zinc finger protein 609 
CPXM2                 0.004   carboxypeptidase X (M14 family), member 2 
PCDH1                 0.004   protocadherin 1 isoform 2 precursor 
PDCD11                0.004   programmed cell death 11 
FILIP1                0.004   filamin A interacting protein 1 
KIAA1009              0.004   KIAA1009 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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