Guide to the Human Genome
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Name: EVPLL Sequence: fasta or formatted (301aa) NCBI GI: 223468634
Description:

envoplakin-like

Referenced in:

Skin and Related Tissues
Spectrin and Plectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         29           3
 C cysteine            2.3          7           1
 D aspartate           4.7         14           1
 E glutamate          11.0         33           2
 F phenylalanine       1.0          3           1
 G glycine             7.6         23           2
 H histidine           4.7         14           2
 I isoleucine          2.7          8           1
 K lysine              3.3         10           1
 L leucine             9.6         29           2
 M methionine          1.7          5           1
 N asparagine          1.3          4           1
 P proline             5.6         17           2
 Q glutamine          11.0         33           2
 R arginine            9.0         27           2
 S serine              4.3         13           3
 T threonine           3.3         10           1
 V valine              4.7         14           2
 W tryptophan          1.3          4           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   envoplakin-like 
EVPL                  0.595   envoplakin 
PPL                   0.164   periplakin 
PLEC1                 0.066   plectin 1 isoform 11 
PLEC1                 0.066   plectin 1 isoform 10 
PLEC1                 0.066   plectin 1 isoform 8 
PLEC1                 0.066   plectin 1 isoform 7 
PLEC1                 0.066   plectin 1 isoform 6 
PLEC1                 0.066   plectin 1 isoform 3 
PLEC1                 0.066   plectin 1 isoform 2 
PLEC1                 0.066   plectin 1 isoform 1 
LOC652460             0.064   PREDICTED: similar to plectin 1, partial 
DST                   0.037   dystonin isoform 4 
DST                   0.037   dystonin isoform 3 
DST                   0.037   dystonin isoform 2 
DST                   0.037   dystonin isoform 1 
DST                   0.037   dystonin isoform 1eB precursor 
DST                   0.037   dystonin isoform 1eA precursor 
DST                   0.037   dystonin isoform 1e precursor 
DSP                   0.032   desmoplakin isoform II 
DSP                   0.032   desmoplakin isoform I 
MACF1                 0.027   microfilament and actin filament cross-linker protei...
ENAH                  0.024   enabled homolog isoform a 
ENAH                  0.024   enabled homolog isoform b 
EIF3A                 0.020   eukaryotic translation initiation factor 3, subunit 1...
CROCC                 0.020   ciliary rootlet coiled-coil 
CCDC57                0.019   coiled-coil domain containing 57 
COL1A1                0.019   alpha 1 type I collagen preproprotein 
ULK1                  0.017   Unc-51-like kinase 1 
LOC100131851          0.017   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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