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Search of human proteins with 9955935
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9955935 acrosomal vesicle protein 1 isoform j precursor
[Homo sapiens]
(121 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo... 256 2e-69
gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo... 233 2e-62
gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo... 206 3e-54
gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo... 184 1e-47
gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo... 181 1e-46
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo... 181 1e-46
gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo... 181 1e-46
gi|9955945 acrosomal vesicle protein 1 isoform k precursor [Homo... 150 2e-37
gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo... 148 8e-37
gi|222136622 prostate and testis expressed 3 [Homo sapiens] 55 2e-08
gi|221554530 prostate and testis expressed 4 [Homo sapiens] 50 3e-07
gi|19923082 expressed in prostate and testis [Homo sapiens] 41 2e-04
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 40 4e-04
gi|47086459 prostate and testis expressed 2 [Homo sapiens] 37 0.003
gi|30794264 glycosylphosphatidylinositol anchored high density l... 35 0.010
gi|50845399 lymphocyte antigen 6 complex G5B [Homo sapiens] 35 0.010
gi|190886439 hypothetical protein LOC138240 [Homo sapiens] 30 0.33
gi|155029539 alpha accessory factor 132 [Homo sapiens] 30 0.57
gi|169214821 PREDICTED: hypothetical protein [Homo sapiens] 29 0.74
gi|169215021 PREDICTED: hypothetical protein [Homo sapiens] 29 0.74
gi|169214546 PREDICTED: hypothetical protein [Homo sapiens] 29 0.74
gi|14192943 multiple EGF-like-domains 10 [Homo sapiens] 29 0.97
gi|4827050 ubiquitin specific protease 14 isoform a [Homo sapiens] 28 1.3
gi|222352166 nel-like 1 isoform 2 precursor [Homo sapiens] 28 2.2
gi|222352164 nel-like 1 isoform 1 precursor [Homo sapiens] 28 2.2
gi|50845403 lymphocyte antigen 6 complex G5C [Homo sapiens] 28 2.2
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 27 2.8
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 27 3.7
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 27 3.7
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 27 3.7
>gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo
sapiens]
Length = 121
Score = 256 bits (655), Expect = 2e-69
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGKCLR 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGKCLR
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGKCLR 60
Query: 61 GEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNK 120
GEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNK
Sbjct: 61 GEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNK 120
Query: 121 I 121
I
Sbjct: 121 I 121
>gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo
sapiens]
Length = 170
Score = 233 bits (595), Expect = 2e-62
Identities = 121/170 (71%), Positives = 121/170 (71%), Gaps = 49/170 (28%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG------------------- 41
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSDEQPSGEHGSGEQPS 60
Query: 42 ------------------------------TILNCYTCAYMNDQGKCLRGEGTCITQNSQ 71
TILNCYTCAYMNDQGKCLRGEGTCITQNSQ
Sbjct: 61 GEQASGEQPSGEHASGEQASGAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQ 120
Query: 72 QCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
QCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 121 QCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 170
>gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo
sapiens]
Length = 176
Score = 206 bits (525), Expect = 3e-54
Identities = 114/176 (64%), Positives = 116/176 (65%), Gaps = 55/176 (31%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNE----------------------------LSG---- 28
MNRFLLLMSLYLLGSARGTSSQPNE LSG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
Query: 29 --------------SIDH---------QTSVQQLPGTILNCYTCAYMNDQGKCLRGEGTC 65
S +H Q S +Q GTILNCYTCAYMNDQGKCLRGEGTC
Sbjct: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGTILNCYTCAYMNDQGKCLRGEGTC 120
Query: 66 ITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
ITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 121 ITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 176
>gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo
sapiens]
Length = 246
Score = 184 bits (468), Expect = 1e-47
Identities = 87/104 (83%), Positives = 90/104 (86%), Gaps = 6/104 (5%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 77
G+ QP+ Q S +Q GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK
Sbjct: 149 GSGEQPS------GEQASGEQPSGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 202
Query: 78 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 203 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 246
Score = 83.2 bits (204), Expect = 4e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
>gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo
sapiens]
Length = 210
Score = 181 bits (459), Expect = 1e-46
Identities = 86/104 (82%), Positives = 89/104 (85%), Gaps = 4/104 (3%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 77
G + + SG+ TS GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK
Sbjct: 111 GEHASGEQASGAPISSTST----GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 166
Query: 78 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 167 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
Score = 83.2 bits (204), Expect = 4e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
sapiens]
Length = 265
Score = 181 bits (459), Expect = 1e-46
Identities = 86/104 (82%), Positives = 89/104 (85%), Gaps = 4/104 (3%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 77
G + + SG+ TS GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK
Sbjct: 166 GEHASGEQASGAPISSTST----GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 221
Query: 78 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 222 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 265
Score = 83.2 bits (204), Expect = 4e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
>gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo
sapiens]
Length = 195
Score = 181 bits (459), Expect = 1e-46
Identities = 86/104 (82%), Positives = 89/104 (85%), Gaps = 4/104 (3%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 77
G + + SG+ TS GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK
Sbjct: 96 GEHASGEQASGAPISSTST----GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 151
Query: 78 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 152 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 195
Score = 83.2 bits (204), Expect = 4e-17
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
>gi|9955945 acrosomal vesicle protein 1 isoform k precursor [Homo
sapiens]
Length = 81
Score = 150 bits (379), Expect = 2e-37
Identities = 81/121 (66%), Positives = 81/121 (66%), Gaps = 40/121 (33%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGKCLR 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG------------------- 41
Query: 61 GEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNK 120
GKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNK
Sbjct: 42 ---------------------GKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNK 80
Query: 121 I 121
I
Sbjct: 81 I 81
>gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo
sapiens]
Length = 155
Score = 148 bits (374), Expect = 8e-37
Identities = 88/155 (56%), Positives = 95/155 (61%), Gaps = 34/155 (21%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGT-----------------I 43
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG +
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
Query: 44 LNCYTCAYMNDQ--------GKCLRGEGTCITQNSQQ---------CMLKKIFEGGKLQF 86
+ +D+ G+ GE Q S + + GGKLQF
Sbjct: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGGKLQF 120
Query: 87 MVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
MVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 121 MVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 155
>gi|222136622 prostate and testis expressed 3 [Homo sapiens]
Length = 98
Score = 54.7 bits (130), Expect = 2e-08
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 42 TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLF 101
T L C TC +C RG G C Q + CML +I++ LQ C+ C M F
Sbjct: 19 TSLQCITCHLRTRTDRCRRGFGVCTAQKGEACMLLRIYQRNTLQISYMVCQKFCRDMT-F 77
Query: 102 SHGTRMQIICCRNQSFCN 119
R + C N ++CN
Sbjct: 78 DLRNRTYVHTCCNYNYCN 95
>gi|221554530 prostate and testis expressed 4 [Homo sapiens]
Length = 98
Score = 50.4 bits (119), Expect = 3e-07
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 44 LNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSH 103
L C TC Y + KC+ G GTCI + ++ C F G K + C+ C
Sbjct: 23 LKCNTCIY-TEGWKCMAGRGTCIAKENELCSTTAYFRGDKHMYSTHMCKYKCREEESSKR 81
Query: 104 GTRMQIICCRNQSFCN 119
G +CC +++FCN
Sbjct: 82 GLLRVTLCC-DRNFCN 96
>gi|19923082 expressed in prostate and testis [Homo sapiens]
Length = 126
Score = 40.8 bits (94), Expect = 2e-04
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 12/128 (9%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQ-LPGT-ILNCYTCAYMNDQGKC 58
M++ LLL LL R S + + +++ +V+ P I+ C C KC
Sbjct: 1 MDKSLLLELPILLCCFRALSGSLSMRNDAVNEIVAVKNNFPVIEIVQCRMCHLQFPGEKC 60
Query: 59 LRGEGTCITQNSQQCMLKKIFE-GGKLQFMVQGCENMCPSMNLFSHGTRMQII-----CC 112
RG G C + CM+ ++F+ G GC C + G R + CC
Sbjct: 61 SRGRGICTATTEEACMVGRMFKRDGNPWLTFMGCLKNCADVK----GIRWSVYLVNFRCC 116
Query: 113 RNQSFCNK 120
R+ CN+
Sbjct: 117 RSHDLCNE 124
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 40.0 bits (92), Expect = 4e-04
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 40 PGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMN 99
PGT L CY+C CL+ E TQ +QC +I G L + +GC C +
Sbjct: 17 PGTALLCYSCKAQVSNEDCLQVENC--TQLGEQCWTARIRAVGLLTVISKGCSLNCVDDS 74
Query: 100 LFSHGTRMQIICCRNQSFCN 119
+ + I CC + CN
Sbjct: 75 QDYYVGKKNITCC-DTDLCN 93
>gi|47086459 prostate and testis expressed 2 [Homo sapiens]
Length = 113
Score = 37.4 bits (85), Expect = 0.003
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 39 LPGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIF----EGGKL-QFMVQGCEN 93
+ T + CY C + G C +C ++ Q C ++ + +G + + C
Sbjct: 24 IKATEIMCYECKKYH-LGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMT 82
Query: 94 MCPSMNLFSHGTRMQIICCRNQSFCN 119
C +N R+++ICC + ++CN
Sbjct: 83 SCEDINFLGFTKRVELICCDHSNYCN 108
>gi|30794264 glycosylphosphatidylinositol anchored high density
lipoprotein binding protein 1 [Homo sapiens]
Length = 184
Score = 35.4 bits (80), Expect = 0.010
Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 19/132 (14%)
Query: 6 LLMSLYLLGSARGTSSQPNELSGSIDH--------------QTSVQQLPG----TILNCY 47
+L++L L G +Q E DH + +LPG +L CY
Sbjct: 7 VLLALLLCGRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRVLLRCY 66
Query: 48 TCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRM 107
TC + +C + Q + E G L C + C + GT++
Sbjct: 67 TCKSLPRDERCNLTQNCSHGQTCTTLIAHGNTESGLLTTHSTWCTDSCQPITKTVEGTQV 126
Query: 108 QIICCRNQSFCN 119
+ CC++ S CN
Sbjct: 127 TMTCCQS-SLCN 137
>gi|50845399 lymphocyte antigen 6 complex G5B [Homo sapiens]
Length = 201
Score = 35.4 bits (80), Expect = 0.010
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 43 ILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 91
I C+ C + C+ G C +S CM+ I+ K++F+V+GC
Sbjct: 25 IRTCHFCLVEDPSVGCISGSEKCTISSSSLCMVITIYYDVKVRFIVRGC 73
>gi|190886439 hypothetical protein LOC138240 [Homo sapiens]
Length = 161
Score = 30.4 bits (67), Expect = 0.33
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 33 QTSVQQLPGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC- 91
+ +Q + G I C C CL GTC + Q C + +GG + V+GC
Sbjct: 70 EVHIQDVGGLI--CRACNLSLPFHGCLLDLGTCQAEPGQYCKEEVHIQGGIQWYSVKGCT 127
Query: 92 --ENMCPSMNLFSHGTRMQIIC---CRNQSFCN 119
+ C L ++ + C N S CN
Sbjct: 128 KNTSECFKSTLVKRILQLHELVTTHCCNHSLCN 160
>gi|155029539 alpha accessory factor 132 [Homo sapiens]
Length = 1217
Score = 29.6 bits (65), Expect = 0.57
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 46 CYTCAYMNDQGKCLRGEGTCITQNS-QQCMLKKIFEGGKLQFMVQGCEN 93
C C + QGKC R TC TQ + Q +++ + E G + +V C N
Sbjct: 1043 CAYCTSICRQGKCTRLGSTCPTQTAISQAIIRLLVEDGTAEAVVT-CRN 1090
>gi|169214821 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 29.3 bits (64), Expect = 0.74
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 7 LMSLYLLGSARGTSSQPNELSGSIDH 32
L +L LLGSA T++ PN SG++ H
Sbjct: 24 LDALRLLGSAHATTTHPNPASGTLGH 49
>gi|169215021 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 29.3 bits (64), Expect = 0.74
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 7 LMSLYLLGSARGTSSQPNELSGSIDH 32
L +L LLGSA T++ PN SG++ H
Sbjct: 24 LDALRLLGSAHATTTHPNPASGTLGH 49
>gi|169214546 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 29.3 bits (64), Expect = 0.74
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 7 LMSLYLLGSARGTSSQPNELSGSIDH 32
L +L LLGSA T++ PN SG++ H
Sbjct: 24 LDALRLLGSAHATTTHPNPASGTLGH 49
>gi|14192943 multiple EGF-like-domains 10 [Homo sapiens]
Length = 1140
Score = 28.9 bits (63), Expect = 0.97
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 86 FMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
FM + CE CPS + +G R QI C N S C+ I
Sbjct: 780 FMGRHCEQKCPS-GTYGYGCR-QICDCLNNSTCDHI 813
>gi|4827050 ubiquitin specific protease 14 isoform a [Homo sapiens]
Length = 494
Score = 28.5 bits (62), Expect = 1.3
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 8 MSLYLLGSARGTSSQPNELSGSIDHQT-----SVQQLPGTILNCYTCAYMNDQGKCLR 60
M+L ++GSA +P+ + ++ T S +LP + N YMN +C+R
Sbjct: 67 MTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIR 124
>gi|222352166 nel-like 1 isoform 2 precursor [Homo sapiens]
Length = 763
Score = 27.7 bits (60), Expect = 2.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 68 QNSQQCMLKKIFEGGKLQFMVQGCENMCPSMN 99
+N + + K I + GK+ FM G CP++N
Sbjct: 193 RNQKHGLFKGIIQDGKIIFMPNGYITQCPNLN 224
>gi|222352164 nel-like 1 isoform 1 precursor [Homo sapiens]
Length = 810
Score = 27.7 bits (60), Expect = 2.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 68 QNSQQCMLKKIFEGGKLQFMVQGCENMCPSMN 99
+N + + K I + GK+ FM G CP++N
Sbjct: 193 RNQKHGLFKGIIQDGKIIFMPNGYITQCPNLN 224
>gi|50845403 lymphocyte antigen 6 complex G5C [Homo sapiens]
Length = 147
Score = 27.7 bits (60), Expect = 2.2
Identities = 13/50 (26%), Positives = 17/50 (34%)
Query: 44 LNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCEN 93
L CY C + CL G C+T C+ MV C +
Sbjct: 57 LRCYRCLLETKELGCLLGSDICLTPAGSSCITLHKKNSSGSDVMVSDCRS 106
>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
Length = 97
Score = 27.3 bits (59), Expect = 2.8
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 35 SVQQLPGTILNCYTCAYM---NDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 91
S+Q + C+ C + +CLR C+T + + + L + + C
Sbjct: 14 SLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTAT-----RVLSNTEDLPLVTKMC 68
Query: 92 ENMCPSMNLFSHGTRMQIICCRNQSFCN 119
CP + G + I CC+ S CN
Sbjct: 69 HIGCPDIPSLGLGPYVSIACCQT-SLCN 95
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 26.9 bits (58), Expect = 3.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGK 57
G S P+ L S + V+ L + C TC+ DQGK
Sbjct: 234 GNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGK 273
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 26.9 bits (58), Expect = 3.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGK 57
G S P+ L S + V+ L + C TC+ DQGK
Sbjct: 234 GNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGK 273
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 26.9 bits (58), Expect = 3.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGK 57
G S P+ L S + V+ L + C TC+ DQGK
Sbjct: 234 GNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGK 273
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.135 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,544,284
Number of Sequences: 37866
Number of extensions: 180905
Number of successful extensions: 550
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 512
Number of HSP's gapped (non-prelim): 46
length of query: 121
length of database: 18,247,518
effective HSP length: 89
effective length of query: 32
effective length of database: 14,877,444
effective search space: 476078208
effective search space used: 476078208
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.