Guide to the Human Genome
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Name: USP14 Sequence: fasta or formatted (494aa) NCBI GI: 4827050
Description:

ubiquitin specific protease 14 isoform a

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [459aa] ubiquitin specific protease 14 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         30           2
 C cysteine            1.6          8           1
 D aspartate           5.9         29           3
 E glutamate           8.9         44           4
 F phenylalanine       4.3         21           2
 G glycine             5.1         25           3
 H histidine           0.8          4           1
 I isoleucine          4.3         21           2
 K lysine              9.1         45           3
 L leucine             9.3         46           2
 M methionine          4.0         20           2
 N asparagine          3.0         15           2
 P proline             4.3         21           2
 Q glutamine           6.3         31           2
 R arginine            3.2         16           2
 S serine              8.1         40           4
 T threonine           5.3         26           2
 V valine              6.1         30           1
 W tryptophan          1.2          6           1
 Y tyrosine            3.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin specific protease 14 isoform a 
USP14                 0.914   ubiquitin specific protease 14 isoform b 
USP27X                0.055   X-linked ubiquitin thioesterase 27 
USP51                 0.054   ubiquitin specific protease 51 
USP22                 0.049   ubiquitin thiolesterase 22 
USP12                 0.042   ubiquitin thiolesterase 12 
LOC100287238          0.040   PREDICTED: hypothetical protein XP_002342474 
USP46                 0.036   ubiquitin specific peptidase 46 isoform 2 
USP46                 0.036   ubiquitin specific peptidase 46 isoform 1 
USP47                 0.036   ubiquitin specific protease 47 
LOC100287327          0.036   PREDICTED: hypothetical protein XP_002342475 
USP36                 0.036   ubiquitin specific peptidase 36 
LOC728379             0.035   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC728373             0.035   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC100287513          0.035   PREDICTED: hypothetical protein XP_002342480 
LOC100287478          0.035   PREDICTED: hypothetical protein XP_002342479 
LOC100287205          0.035   PREDICTED: hypothetical protein XP_002342473 
DUB3                  0.035   deubiquitinating enzyme 3 
LOC728419             0.034   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728405             0.034   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728400             0.034   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728393             0.034   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
USP17L5               0.034   PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17...
LOC728379             0.034   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728373             0.034   PREDICTED: similar to deubiquitinating enzyme 1 [Ho...
LOC728369             0.034   PREDICTED: similar to deubiquitinating enzyme 3 [Ho...
LOC100287441          0.034   PREDICTED: hypothetical protein XP_002342478 
LOC100287404          0.034   PREDICTED: hypothetical protein XP_002342477 
LOC100287364          0.034   PREDICTED: hypothetical protein XP_002342476 
LOC100287178          0.034   PREDICTED: hypothetical protein XP_002342472 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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