Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ACRV1 Sequence: fasta or formatted (195aa) NCBI GI: 9955931
Description:

acrosomal vesicle protein 1 isoform d precursor

Referenced in:

Testes and Sperm

Other entries for this name:
alt prot [265aa] acrosomal vesicle protein 1 isoform a precursor
alt prot [246aa] acrosomal vesicle protein 1 isoform b precursor
alt prot [210aa] acrosomal vesicle protein 1 isoform c precursor
alt prot [176aa] acrosomal vesicle protein 1 isoform e precursor
alt prot [121aa] acrosomal vesicle protein 1 isoform j precursor
alt prot [170aa] acrosomal vesicle protein 1 isoform f precursor
alt prot [155aa] acrosomal vesicle protein 1 isoform h precursor
alt prot [81aa] acrosomal vesicle protein 1 isoform k precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1          6           1
 C cysteine            5.1         10           2
 D aspartate           1.5          3           1
 E glutamate           9.2         18           1
 F phenylalanine       2.6          5           1
 G glycine            12.3         24           2
 H histidine           2.6          5           1
 I isoleucine          4.1          8           2
 K lysine              2.6          5           2
 L leucine             8.2         16           3
 M methionine          4.1          8           1
 N asparagine          4.6          9           1
 P proline             5.6         11           1
 Q glutamine          10.8         21           2
 R arginine            2.6          5           1
 S serine             13.8         27           2
 T threonine           4.6          9           1
 V valine              1.0          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acrosomal vesicle protein 1 isoform d precursor [Homo... 
ACRV1                 0.974   acrosomal vesicle protein 1 isoform c precursor [Homo...
ACRV1                 0.874   acrosomal vesicle protein 1 isoform e precursor [Homo...
ACRV1                 0.832   acrosomal vesicle protein 1 isoform f precursor [Homo...
ACRV1                 0.821   acrosomal vesicle protein 1 isoform a precursor [Homo...
ACRV1                 0.750   acrosomal vesicle protein 1 isoform b precursor [Homo...
ACRV1                 0.718   acrosomal vesicle protein 1 isoform h precursor [Homo...
ACRV1                 0.411   acrosomal vesicle protein 1 isoform j precursor [Homo...
ACRV1                 0.182   acrosomal vesicle protein 1 isoform k precursor [Homo...
PATE3                 0.079   prostate and testis expressed 3 
ATF7IP                0.068   activating transcription factor 7 interacting protei...
PATE4                 0.066   prostate and testis expressed 4 
PCLO                  0.053   piccolo isoform 2 
PCLO                  0.053   piccolo isoform 1 
LOC727838             0.045   PREDICTED: similar to cancer/testis antigen family ...
LOC100286952          0.045   PREDICTED: hypothetical protein XP_002344252 
PATE1                 0.039   expressed in prostate and testis 
VCX3B                 0.039   variable charge, X-linked 3B 
CLIC6                 0.037   chloride intracellular channel 6 
ACAN                  0.037   aggrecan isoform 2 precursor 
ACAN                  0.037   aggrecan isoform 1 precursor 
VCX                   0.037   variable charge, X chromosome 
PSCA                  0.032   prostate stem cell antigen preproprotein 
PATE2                 0.032   prostate and testis expressed 2 
SALL2                 0.032   sal-like 2 
HIC2                  0.032   hypermethylated in cancer 2 
RPGR                  0.032   retinitis pigmentosa GTPase regulator isoform C [Hom...
POU6F2                0.032   POU domain, class 6, transcription factor 2 
FLG2                  0.029   filaggrin family member 2 
LY6G5B                0.029   lymphocyte antigen 6 complex G5B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press