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Search of human proteins with 9955931
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9955931 acrosomal vesicle protein 1 isoform d precursor
[Homo sapiens]
(195 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo... 405 e-113
gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo... 395 e-110
gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo... 357 4e-99
gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo... 341 3e-94
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo... 337 3e-93
gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo... 310 7e-85
gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo... 298 2e-81
gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo... 181 3e-46
gi|9955945 acrosomal vesicle protein 1 isoform k precursor [Homo... 94 7e-20
gi|222136622 prostate and testis expressed 3 [Homo sapiens] 55 5e-08
gi|38261962 activating transcription factor 7 interacting protei... 51 7e-07
gi|221554530 prostate and testis expressed 4 [Homo sapiens] 50 9e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 45 4e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 45 4e-05
gi|239746922 PREDICTED: similar to cancer/testis antigen family ... 42 3e-04
gi|239744892 PREDICTED: hypothetical protein XP_002344252 [Homo ... 42 4e-04
gi|19923082 expressed in prostate and testis [Homo sapiens] 40 0.001
gi|149999615 variable charge, X-linked 3B [Homo sapiens] 40 0.001
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 39 0.002
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens] 39 0.004
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens] 39 0.004
gi|66932943 variable charge, X chromosome [Homo sapiens] 39 0.004
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 37 0.008
gi|47086459 prostate and testis expressed 2 [Homo sapiens] 37 0.011
gi|49087132 sal-like 2 [Homo sapiens] 37 0.011
gi|139394599 hypermethylated in cancer 2 [Homo sapiens] 37 0.011
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 37 0.014
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 37 0.014
gi|62122917 filaggrin family member 2 [Homo sapiens] 36 0.018
gi|50845399 lymphocyte antigen 6 complex G5B [Homo sapiens] 36 0.018
>gi|9955931 acrosomal vesicle protein 1 isoform d precursor [Homo
sapiens]
Length = 195
Score = 405 bits (1040), Expect = e-113
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
Query: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNC 120
SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNC
Sbjct: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNC 120
Query: 121 YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR 180
YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR
Sbjct: 121 YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR 180
Query: 181 MQIICCRNQSFCNKI 195
MQIICCRNQSFCNKI
Sbjct: 181 MQIICCRNQSFCNKI 195
>gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo
sapiens]
Length = 210
Score = 395 bits (1014), Expect = e-110
Identities = 195/210 (92%), Positives = 195/210 (92%), Gaps = 15/210 (7%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE---------------QPS 45
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE QPS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEPAATEHAEGEHTVGEQPS 60
Query: 46 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 105
GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS
Sbjct: 61 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 120
Query: 106 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 165
GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC
Sbjct: 121 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 180
Query: 166 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 195
ENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 181 ENMCPSMNLFSHGTRMQIICCRNQSFCNKI 210
>gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo
sapiens]
Length = 176
Score = 357 bits (916), Expect = 4e-99
Identities = 176/195 (90%), Positives = 176/195 (90%), Gaps = 19/195 (9%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
Query: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNC 120
SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPS GTILNC
Sbjct: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPS-------------------GTILNC 101
Query: 121 YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR 180
YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR
Sbjct: 102 YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR 161
Query: 181 MQIICCRNQSFCNKI 195
MQIICCRNQSFCNKI
Sbjct: 162 MQIICCRNQSFCNKI 176
>gi|9955937 acrosomal vesicle protein 1 isoform f precursor [Homo
sapiens]
Length = 170
Score = 341 bits (874), Expect = 3e-94
Identities = 170/195 (87%), Positives = 170/195 (87%), Gaps = 25/195 (12%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPS--------------- 45
Query: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNC 120
DEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNC
Sbjct: 46 ----------DEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNC 95
Query: 121 YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR 180
YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR
Sbjct: 96 YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR 155
Query: 181 MQIICCRNQSFCNKI 195
MQIICCRNQSFCNKI
Sbjct: 156 MQIICCRNQSFCNKI 170
>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
sapiens]
Length = 265
Score = 337 bits (865), Expect = 3e-93
Identities = 183/265 (69%), Positives = 186/265 (70%), Gaps = 70/265 (26%)
Query: 1 MNRFLLLMSLYLLGSARG---------------------------------------TSS 21
MNRFLLLMSLYLLGSARG TSS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEFFSLENPSDAEALYETSS 60
Query: 22 QPNELS--GSIDHQTSVQQLP-----------------------------GEQPSGEQPS 50
N LS GS +H +S + GEQPSGEQPS
Sbjct: 61 GLNTLSEHGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPS 120
Query: 51 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS 110
GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS
Sbjct: 121 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS 180
Query: 111 STSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCP 170
STSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCP
Sbjct: 181 STSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCP 240
Query: 171 SMNLFSHGTRMQIICCRNQSFCNKI 195
SMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 241 SMNLFSHGTRMQIICCRNQSFCNKI 265
>gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo
sapiens]
Length = 246
Score = 310 bits (793), Expect = 7e-85
Identities = 171/246 (69%), Positives = 172/246 (69%), Gaps = 51/246 (20%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPS---------- 50
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGE S E PS
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEFFSLENPSDAEALYETSS 60
Query: 51 --------------------GEHLSGEQPLSELES---------------GEQPSDEQPS 75
EH SGE SE S GEQPS EQPS
Sbjct: 61 GLNTLSEHGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPS 120
Query: 76 GEHGSGEQP-----SGEQASGEQPSGEHASGEQASGAPISSTS-TGTILNCYTCAYMNDQ 129
GEH SGEQP SGEQ S EQPSGEH SGEQ SG S +GTILNCYTCAYMNDQ
Sbjct: 121 GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGTILNCYTCAYMNDQ 180
Query: 130 GKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQ 189
GKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQ
Sbjct: 181 GKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQ 240
Query: 190 SFCNKI 195
SFCNKI
Sbjct: 241 SFCNKI 246
>gi|9955941 acrosomal vesicle protein 1 isoform h precursor [Homo
sapiens]
Length = 155
Score = 298 bits (764), Expect = 2e-81
Identities = 155/195 (79%), Positives = 155/195 (79%), Gaps = 40/195 (20%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL 60
Query: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNC 120
SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTST
Sbjct: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTST------ 114
Query: 121 YTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTR 180
GGKLQFMVQGCENMCPSMNLFSHGTR
Sbjct: 115 ----------------------------------GGKLQFMVQGCENMCPSMNLFSHGTR 140
Query: 181 MQIICCRNQSFCNKI 195
MQIICCRNQSFCNKI
Sbjct: 141 MQIICCRNQSFCNKI 155
>gi|9955935 acrosomal vesicle protein 1 isoform j precursor [Homo
sapiens]
Length = 121
Score = 181 bits (459), Expect = 3e-46
Identities = 86/104 (82%), Positives = 89/104 (85%), Gaps = 4/104 (3%)
Query: 96 GEHASGEQASGAPISSTST----GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 151
G + + SG+ TS GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK
Sbjct: 18 GTSSQPNELSGSIDHQTSVQQLPGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKK 77
Query: 152 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 195
IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 78 IFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 121
Score = 83.2 bits (204), Expect = 1e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
>gi|9955945 acrosomal vesicle protein 1 isoform k precursor [Homo
sapiens]
Length = 81
Score = 94.0 bits (232), Expect = 7e-20
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 155 GGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 195
GGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI
Sbjct: 41 GGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI 81
Score = 83.2 bits (204), Expect = 1e-16
Identities = 41/41 (100%), Positives = 41/41 (100%)
Query: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG
Sbjct: 1 MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPG 41
>gi|222136622 prostate and testis expressed 3 [Homo sapiens]
Length = 98
Score = 54.7 bits (130), Expect = 5e-08
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 116 TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLF 175
T L C TC +C RG G C Q + CML +I++ LQ C+ C M F
Sbjct: 19 TSLQCITCHLRTRTDRCRRGFGVCTAQKGEACMLLRIYQRNTLQISYMVCQKFCRDMT-F 77
Query: 176 SHGTRMQIICCRNQSFCN 193
R + C N ++CN
Sbjct: 78 DLRNRTYVHTCCNYNYCN 95
>gi|38261962 activating transcription factor 7 interacting protein
[Homo sapiens]
Length = 1270
Score = 50.8 bits (120), Expect = 7e-07
Identities = 33/100 (33%), Positives = 46/100 (46%)
Query: 12 LLGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSD 71
+L S TS P S S G+ PSG+ G+ SG+ +L SG+ S
Sbjct: 148 VLASGDSTSGDPTSSEPSSSDAASGDATSGDAPSGDVSPGDATSGDATADDLSSGDPTSS 207
Query: 72 EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISS 111
+ GE E SG+ A+ + S E S + ASGAP S+
Sbjct: 208 DPIPGEPVPVEPISGDCAADDIASSEITSVDLASGAPAST 247
Score = 49.3 bits (116), Expect = 2e-06
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 40 PGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHA 99
PG+ +G+ SG SG+ + S E S + SG+ SG+ PSG+ + G+ SG+
Sbjct: 136 PGDLDAGDPASGVLASGDSTSGDPTSSEPSSSDAASGDATSGDAPSGDVSPGDATSGDAT 195
Query: 100 SGEQASGAPISS 111
+ + +SG P SS
Sbjct: 196 ADDLSSGDPTSS 207
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/71 (35%), Positives = 38/71 (53%)
Query: 36 VQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPS 95
V +LP E SG+ G+ +G+ L SG+ S + S E S + SG+ SG+ PS
Sbjct: 122 VSKLPAEPVSGDPAPGDLDAGDPASGVLASGDSTSGDPTSSEPSSSDAASGDATSGDAPS 181
Query: 96 GEHASGEQASG 106
G+ + G+ SG
Sbjct: 182 GDVSPGDATSG 192
Score = 44.3 bits (103), Expect = 7e-05
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHAS 100
G SG+ SG+ S E S+ SG+ S + PSG+ G+ SG+ + + SG+ S
Sbjct: 147 GVLASGDSTSGDPTSSEPSSSDAASGDATSGDAPSGDVSPGDATSGDATADDLSSGDPTS 206
Query: 101 GEQASGAPI 109
+ G P+
Sbjct: 207 SDPIPGEPV 215
Score = 36.2 bits (82), Expect = 0.018
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 34 TSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQ 93
TS E S + SG+ SG+ P ++ G+ S + + + SG+ S + GE
Sbjct: 155 TSGDPTSSEPSSSDAASGDATSGDAPSGDVSPGDATSGDATADDLSSGDPTSSDPIPGEP 214
Query: 94 PSGEHASGEQASGAPISSTSTGTIL 118
E SG+ A+ SS T L
Sbjct: 215 VPVEPISGDCAADDIASSEITSVDL 239
Score = 36.2 bits (82), Expect = 0.018
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
G A + ++LS TS +PGE E SG+ + + SE+ S + S
Sbjct: 187 GDATSGDATADDLSSG--DPTSSDPIPGEPVPVEPISGDCAADDIASSEITSVDLASGAP 244
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTST 114
S + S + SG+ +S E S + A+GE AS ++S ST
Sbjct: 245 ASTDPASDDLASGDLSSSELASDDLATGELASD-ELTSEST 284
>gi|221554530 prostate and testis expressed 4 [Homo sapiens]
Length = 98
Score = 50.4 bits (119), Expect = 9e-07
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 118 LNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSH 177
L C TC Y + KC+ G GTCI + ++ C F G K + C+ C
Sbjct: 23 LKCNTCIY-TEGWKCMAGRGTCIAKENELCSTTAYFRGDKHMYSTHMCKYKCREEESSKR 81
Query: 178 GTRMQIICCRNQSFCN 193
G +CC +++FCN
Sbjct: 82 GLLRVTLCC-DRNFCN 96
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 45.1 bits (105), Expect = 4e-05
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 18 GTSSQPNELSGSID---HQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQP 74
G + P++L G Q + P +QP +P + +P + +PS +QP
Sbjct: 465 GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQP 524
Query: 75 SGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 115
+QP + S +QPS S +Q S P+S T +G
Sbjct: 525 GSTKPPSQQPGSAKPSAQQPSPAKPSAQQ-STKPVSQTGSG 564
Score = 35.8 bits (81), Expect = 0.024
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
GSA+ S QP + QQ +PS +QP +QP S S +QPS +
Sbjct: 495 GSAKPPSQQPGST------KPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAK 548
Query: 74 PSGEH--------GSGE--QPSGEQASGEQPSGE 97
PS + GSG+ QP S +QP +
Sbjct: 549 PSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQ 582
Score = 34.7 bits (78), Expect = 0.053
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 21 SQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGS 80
+QP+ L+ + Q + P + P +P + L +P ++ E+PS EQP + +
Sbjct: 333 AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPK--A 390
Query: 81 GEQPSGEQASGEQPSGEHASGEQASGAP 108
QP G + Q G Q G P
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQQVGTP 418
Score = 31.6 bits (70), Expect = 0.45
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 33 QTSVQQ-----LPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE 87
+T VQQ +P +Q + S + +P S+L +P +QP +QP
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSA 497
Query: 88 QASGEQPSGEHASGEQASGAPISSTSTGT 116
+ +QP +Q A S G+
Sbjct: 498 KPPSQQPGSTKPPPQQPGPAKPSPQQPGS 526
Score = 31.2 bits (69), Expect = 0.58
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
GS + +S QP + + V + P +QP +P + + +PL+ +QP +
Sbjct: 377 GSEKPSSEQPGPKA--LAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLA-----QQPGLQS 429
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 105
P+ G + P + G+ P+ + G+ ++
Sbjct: 430 PAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSA 461
Score = 30.4 bits (67), Expect = 1.00
Identities = 17/79 (21%), Positives = 30/79 (37%)
Query: 33 QTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGE 92
QT + P + P +P + +P + +P +QP +QP + S +
Sbjct: 463 QTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQ 522
Query: 93 QPSGEHASGEQASGAPISS 111
QP +Q A S+
Sbjct: 523 QPGSTKPPSQQPGSAKPSA 541
Score = 27.3 bits (59), Expect = 8.4
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 33 QTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGE 92
+TS QQ +P + P +QP +P +QP +QP + +
Sbjct: 458 KTSAQQTGPTKPPSQLPGPAKPPPQQP-----GPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 93 QPSGEHASGEQASGAPISSTSTGT 116
QP S +Q S G+
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPGS 536
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 45.1 bits (105), Expect = 4e-05
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 18 GTSSQPNELSGSID---HQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQP 74
G + P++L G Q + P +QP +P + +P + +PS +QP
Sbjct: 465 GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQP 524
Query: 75 SGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 115
+QP + S +QPS S +Q S P+S T +G
Sbjct: 525 GSTKPPSQQPGSAKPSAQQPSPAKPSAQQ-STKPVSQTGSG 564
Score = 35.8 bits (81), Expect = 0.024
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 16/94 (17%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
GSA+ S QP + QQ +PS +QP +QP S S +QPS +
Sbjct: 495 GSAKPPSQQPGST------KPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAK 548
Query: 74 PSGEH--------GSGE--QPSGEQASGEQPSGE 97
PS + GSG+ QP S +QP +
Sbjct: 549 PSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQ 582
Score = 34.7 bits (78), Expect = 0.053
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 21 SQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGS 80
+QP+ L+ + Q + P + P +P + L +P ++ E+PS EQP + +
Sbjct: 333 AQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPK--A 390
Query: 81 GEQPSGEQASGEQPSGEHASGEQASGAP 108
QP G + Q G Q G P
Sbjct: 391 LAQPPGVGKTPAQQPGPAKPPTQQVGTP 418
Score = 31.6 bits (70), Expect = 0.45
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 33 QTSVQQ-----LPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE 87
+T VQQ +P +Q + S + +P S+L +P +QP +QP
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSA 497
Query: 88 QASGEQPSGEHASGEQASGAPISSTSTGT 116
+ +QP +Q A S G+
Sbjct: 498 KPPSQQPGSTKPPPQQPGPAKPSPQQPGS 526
Score = 31.2 bits (69), Expect = 0.58
Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
GS + +S QP + + V + P +QP +P + + +PL+ +QP +
Sbjct: 377 GSEKPSSEQPGPKA--LAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLA-----QQPGLQS 429
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQAS 105
P+ G + P + G+ P+ + G+ ++
Sbjct: 430 PAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSA 461
Score = 30.4 bits (67), Expect = 1.00
Identities = 17/79 (21%), Positives = 30/79 (37%)
Query: 33 QTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGE 92
QT + P + P +P + +P + +P +QP +QP + S +
Sbjct: 463 QTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQ 522
Query: 93 QPSGEHASGEQASGAPISS 111
QP +Q A S+
Sbjct: 523 QPGSTKPPSQQPGSAKPSA 541
Score = 27.3 bits (59), Expect = 8.4
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 33 QTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGE 92
+TS QQ +P + P +QP +P +QP +QP + +
Sbjct: 458 KTSAQQTGPTKPPSQLPGPAKPPPQQP-----GPAKPPPQQPGSAKPPSQQPGSTKPPPQ 512
Query: 93 QPSGEHASGEQASGAPISSTSTGT 116
QP S +Q S G+
Sbjct: 513 QPGPAKPSPQQPGSTKPPSQQPGS 536
>gi|239746922 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 2 [Homo sapiens]
Length = 294
Score = 42.0 bits (97), Expect = 3e-04
Identities = 20/54 (37%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 40 PGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQ 93
P E+P+ E+P+ E + E+ L+E E+ E+P+ E+P+ E S E+P+ E+A+ +
Sbjct: 204 PAEEPAEEKPTEE--AAEEELAE-EAAEEPAKEEPAAEEESAEEPATEEAAAPE 254
Score = 29.3 bits (64), Expect = 2.2
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 7/49 (14%)
Query: 64 ESGEQPSDEQPSGEHG-------SGEQPSGEQASGEQPSGEHASGEQAS 105
E E+P++E+P+ E + E+P+ E+ + E+ S E + E+A+
Sbjct: 203 EPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAA 251
>gi|239744892 PREDICTED: hypothetical protein XP_002344252 [Homo
sapiens]
Length = 557
Score = 41.6 bits (96), Expect = 4e-04
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 13 LGSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQP---SGEHLSGEQPLSELESGEQP 69
LG R P+ LSG H + +L G++ GE P SG+ G+ P S L G++
Sbjct: 228 LGGDRTHGDAPSRLSGDRTHGDAPSRLGGDRTHGEAPSRLSGDRTHGDAP-SRL-GGDRT 285
Query: 70 SDEQPS---GEHGSGEQP---SGEQASGEQPS---GEHASGEQAS 105
+ PS G+ G+ P SG++ G+ PS G+ GE S
Sbjct: 286 HGDAPSRLGGDRTHGDAPSRLSGDRTHGDAPSRLGGDRTHGEAPS 330
>gi|19923082 expressed in prostate and testis [Homo sapiens]
Length = 126
Score = 40.4 bits (93), Expect = 0.001
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
Query: 117 ILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFE-GGKLQFMVQGCENMCPSMNLF 175
I+ C C KC RG G C + CM+ ++F+ G GC C +
Sbjct: 45 IVQCRMCHLQFPGEKCSRGRGICTATTEEACMVGRMFKRDGNPWLTFMGCLKNCADVK-- 102
Query: 176 SHGTRMQII-----CCRNQSFCNK 194
G R + CCR+ CN+
Sbjct: 103 --GIRWSVYLVNFRCCRSHDLCNE 124
>gi|149999615 variable charge, X-linked 3B [Homo sapiens]
Length = 216
Score = 40.0 bits (92), Expect = 0.001
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSD-- 71
G+ SQ +EL + ++ V++ ++ E+P + E+PLS+ E+P
Sbjct: 98 GTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQE 157
Query: 72 ---EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTS 113
E+P + E+P +++ E+P + + E+ P+S S
Sbjct: 158 SEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEE----PLSQES 198
Score = 36.6 bits (83), Expect = 0.014
Identities = 18/88 (20%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 21 SQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSD-----EQPS 75
SQ +++ + ++ V++ ++ E+P + E+PLS+ E+P E+P
Sbjct: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEPL 184
Query: 76 GEHGSGEQPSGEQASGEQPSGEHASGEQ 103
+ E+P +++ E+P + + E+
Sbjct: 185 SQESQVEEPLSQESEMEEPLSQESEMEE 212
Score = 32.7 bits (73), Expect = 0.20
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 30/118 (25%)
Query: 15 SARGTSSQPNELSGSIDHQTSVQQLPGEQPSGE--------------QPSGEHLSGEQPL 60
+A G S QP++ + +LP E+P E +P + E+PL
Sbjct: 72 AAPGPSDQPSQ-------ELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPL 124
Query: 61 SELESGEQPSD-----EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTS 113
S+ E+P E+P + E+P +++ E+P + + E+ P+S S
Sbjct: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEE----PLSQES 178
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 16/114 (14%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLP-----------GEQPSGEQPSGEHLSGEQPL-- 60
G RG + + E S + + Q +Q P G+ E P G+++ E P
Sbjct: 119 GEPRGEAQREPEDSAAPERQEEAEQRPEVPEGSASGEAGDSVDAEGPLGDNIEAEGPAGD 178
Query: 61 ---SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISS 111
+E G+ E P+G+ E P G+ E P+G+ E G + +
Sbjct: 179 SVEAEGRVGDSVDAEGPAGDSVDAEGPLGDNIQAEGPAGDSVDAEGRVGDSVDA 232
Score = 35.0 bits (79), Expect = 0.040
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
GSA G + + G + + E P+G+ E G+ +E +G+ E
Sbjct: 150 GSASGEAGDSVDAEGPLG-----DNIEAEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAEG 204
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISS 111
P G++ E P+G+ E G+ E +G + +
Sbjct: 205 PLGDNIQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDA 242
Score = 34.3 bits (77), Expect = 0.069
Identities = 22/96 (22%), Positives = 35/96 (36%), Gaps = 5/96 (5%)
Query: 16 ARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPS 75
A G E G + G+ E P+G+ + E PL G+ E P+
Sbjct: 162 AEGPLGDNIEAEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAEGPL-----GDNIQAEGPA 216
Query: 76 GEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISS 111
G+ E G+ E P+G+ E G + +
Sbjct: 217 GDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEA 252
Score = 32.0 bits (71), Expect = 0.34
Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 5/101 (4%)
Query: 16 ARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPL-----SELESGEQPS 70
A G + E G + + G+ E P G+++ E P +E G+
Sbjct: 172 AEGPAGDSVEAEGRVGDSVDAEGPAGDSVDAEGPLGDNIQAEGPAGDSVDAEGRVGDSVD 231
Query: 71 DEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISS 111
E P+G+ E G+ P+G+ +G + +
Sbjct: 232 AEGPAGDSVDAEGRVGDSVEAGDPAGDGVEAGVPAGDSVEA 272
Score = 29.6 bits (65), Expect = 1.7
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 16 ARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSE-LESGEQPSDEQP 74
A G + G + G+ E P+G+ + E + + +E+G+ P
Sbjct: 202 AEGPLGDNIQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEAGD------P 255
Query: 75 SGEHGSGEQPSGEQASGEQPSGEHASGEQASG 106
+G+ P+G+ E P+G+ E +G
Sbjct: 256 AGDGVEAGVPAGDSVEAEGPAGDSMDAEGPAG 287
Score = 29.3 bits (64), Expect = 2.2
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 44 PSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG-----EHGSGEQPSGEQASGEQPSGEH 98
P E+P +G + +E G + ++E P G E G G G +A G H
Sbjct: 23 PLAERPGEPGAAGGE--AEGPEGSEGAEEAPRGAAAVKEAGGGGPDRGPEAEARGTRGAH 80
Query: 99 ASGEQASGAP 108
E GAP
Sbjct: 81 GETEAEEGAP 90
Score = 29.3 bits (64), Expect = 2.2
Identities = 23/102 (22%), Positives = 38/102 (37%), Gaps = 6/102 (5%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSG----EQPSGEHLSGEQPLSELESGEQP 69
G + G S P EL+ + V + G + + +GE G+ P E E+
Sbjct: 316 GESAGRS--PGELAWDAAEEAEVPGVKGSEEAAPGDARADAGEDRVGDGPQQEPGEDEER 373
Query: 70 SDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISS 111
+ P G E++ P GE + G A +S+
Sbjct: 374 RERSPEGPREEEAAGGEEESPDSSPHGEASRGAAEPEAQLSN 415
Score = 27.7 bits (60), Expect = 6.5
Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 6/66 (9%)
Query: 43 QPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGE 102
+P G P G Q E+ + +P G E P G + + E P G A E
Sbjct: 6 EPEGVAP------GPQGPPEVPAPLAERPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKE 59
Query: 103 QASGAP 108
G P
Sbjct: 60 AGGGGP 65
>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
Length = 2416
Score = 38.5 bits (88), Expect = 0.004
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 15 SARGTSSQPNELSGSIDHQTSVQQLPGEQ---PSGEQPSGEHLSGEQPLSELESGEQPSD 71
SA G SG +TS ++ + PSG + SG + LS L SG++
Sbjct: 1424 SASGFGDLSGLPSGGEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSGLPSGKEDLV 1483
Query: 72 EQPSGEHGSGEQPSGEQASGEQP---------SGEHASGEQASGAP 108
SG+ G+ PSG SG+ P SGE++ + SG P
Sbjct: 1484 GSASGDLDLGKLPSGTLGSGQAPETSGLPSGFSGEYSGVDLGSGPP 1529
Score = 35.4 bits (80), Expect = 0.031
Identities = 41/125 (32%), Positives = 51/125 (40%), Gaps = 19/125 (15%)
Query: 10 LYLLGSARGTSSQPNELSGSIDHQTSVQ-QLPG-----EQPSGEQPSGEHLSGEQPLSEL 63
L + G A G S ELSG V ++PG QPSG + SG LS L
Sbjct: 1586 LDISGRASGLPSG-TELSGQASGSPDVSGEIPGLFGVSGQPSGFPDTSGETSGVTELSGL 1644
Query: 64 ESGEQPSDEQPSGEHGSGEQPSG-EQASGE---------QPSGEHASGEQASGAP--ISS 111
SG+ + SG QP G SGE QPSG SG P +S
Sbjct: 1645 SSGQPGISGEASGVLYGTSQPFGITDLSGETSGVPDLSGQPSGLPGFSGATSGVPDLVSG 1704
Query: 112 TSTGT 116
T++G+
Sbjct: 1705 TTSGS 1709
Score = 35.0 bits (79), Expect = 0.040
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 35 SVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQP 94
SV Q P Q +GE PSG + EL SG SGEH SG Q+ +P
Sbjct: 1830 SVTQAPTAQEAGEGPSG--------ILEL-SGAHSGAPDMSGEHSGFLDLSGLQSGLIEP 1880
Query: 95 SGE-----HASGEQASGAPISSTST 114
SGE + SG+ AS +S S+
Sbjct: 1881 SGEPPGTPYFSGDFASTTNVSGESS 1905
Score = 30.8 bits (68), Expect = 0.76
Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 21/94 (22%)
Query: 41 GEQPSGEQ---------------PSGEHL----SGEQPLSELESGEQPSDEQPSGEHGSG 81
GE PSG + PSGE L SG LS L SGE P E SG
Sbjct: 935 GELPSGAEILEGSASGVGDLSGLPSGEVLETSASGVGDLSGLPSGEVLETTAPGVEDISG 994
Query: 82 EQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 115
PSGE P E SG SG + +T+ G
Sbjct: 995 -LPSGEVLETTAPGVEDISG-LPSGEVLETTAPG 1026
Score = 30.8 bits (68), Expect = 0.76
Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 25 ELSGSIDHQTSVQQLPGEQPSGEQPSGEHL----SGEQPLSELESGEQPSDEQPSGEHGS 80
++SG + G + E PSGE L SG + LS L SGE+ + SG
Sbjct: 1372 DISGLPSGEVVETSASGIEDVSELPSGEGLETSASGVEDLSRLPSGEEVLEISASGFGDL 1431
Query: 81 GEQPSG----EQASGE-------QPSGEHASGEQASGA 107
PSG E ++ E PSG ASGA
Sbjct: 1432 SGLPSGGEGLETSASEVGTDLSGLPSGREGLETSASGA 1469
Score = 30.4 bits (67), Expect = 1.00
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 16/109 (14%)
Query: 19 TSSQPNELSG----SIDHQTSVQQLPGEQP--SGEQ---PSGEHLSGEQPLSELESGEQP 69
T+S +EL G I + LP + SG PSG LSG+ S SGE P
Sbjct: 1557 TASTASELEGRGTIGISGAGEISGLPSSELDISGRASGLPSGTELSGQASGSPDVSGEIP 1616
Query: 70 SDEQPSGEHGSGEQPSG-EQASGEQPSGEHASGEQASGAPISSTSTGTI 117
G G QPSG SGE SG + IS ++G +
Sbjct: 1617 ------GLFGVSGQPSGFPDTSGETSGVTELSGLSSGQPGISGEASGVL 1659
Score = 29.6 bits (65), Expect = 1.7
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 35 SVQQLPGEQPSGEQ---PSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE---- 87
SV+ P E+P + PS E + E+P + ++ SGE SG+
Sbjct: 814 SVELFPSEEPFPSKEPSPSEEPSASEEPYTPSPPVPSWTELPSSGEESGAPDVSGDFTGS 873
Query: 88 -QASGEQPSGEHASGEQASGAP 108
SG SG++ASG P
Sbjct: 874 GDVSGHLDFSGQLSGDRASGLP 895
>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
Length = 2317
Score = 38.5 bits (88), Expect = 0.004
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 15 SARGTSSQPNELSGSIDHQTSVQQLPGEQ---PSGEQPSGEHLSGEQPLSELESGEQPSD 71
SA G SG +TS ++ + PSG + SG + LS L SG++
Sbjct: 1424 SASGFGDLSGLPSGGEGLETSASEVGTDLSGLPSGREGLETSASGAEDLSGLPSGKEDLV 1483
Query: 72 EQPSGEHGSGEQPSGEQASGEQP---------SGEHASGEQASGAP 108
SG+ G+ PSG SG+ P SGE++ + SG P
Sbjct: 1484 GSASGDLDLGKLPSGTLGSGQAPETSGLPSGFSGEYSGVDLGSGPP 1529
Score = 35.4 bits (80), Expect = 0.031
Identities = 41/125 (32%), Positives = 51/125 (40%), Gaps = 19/125 (15%)
Query: 10 LYLLGSARGTSSQPNELSGSIDHQTSVQ-QLPG-----EQPSGEQPSGEHLSGEQPLSEL 63
L + G A G S ELSG V ++PG QPSG + SG LS L
Sbjct: 1586 LDISGRASGLPSG-TELSGQASGSPDVSGEIPGLFGVSGQPSGFPDTSGETSGVTELSGL 1644
Query: 64 ESGEQPSDEQPSGEHGSGEQPSG-EQASGE---------QPSGEHASGEQASGAP--ISS 111
SG+ + SG QP G SGE QPSG SG P +S
Sbjct: 1645 SSGQPGISGEASGVLYGTSQPFGITDLSGETSGVPDLSGQPSGLPGFSGATSGVPDLVSG 1704
Query: 112 TSTGT 116
T++G+
Sbjct: 1705 TTSGS 1709
Score = 35.0 bits (79), Expect = 0.040
Identities = 31/85 (36%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 35 SVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQP 94
SV Q P Q +GE PSG + EL SG SGEH SG Q+ +P
Sbjct: 1830 SVTQAPTAQEAGEGPSG--------ILEL-SGAHSGAPDMSGEHSGFLDLSGLQSGLIEP 1880
Query: 95 SGE-----HASGEQASGAPISSTST 114
SGE + SG+ AS +S S+
Sbjct: 1881 SGEPPGTPYFSGDFASTTNVSGESS 1905
Score = 30.8 bits (68), Expect = 0.76
Identities = 34/94 (36%), Positives = 38/94 (40%), Gaps = 21/94 (22%)
Query: 41 GEQPSGEQ---------------PSGEHL----SGEQPLSELESGEQPSDEQPSGEHGSG 81
GE PSG + PSGE L SG LS L SGE P E SG
Sbjct: 935 GELPSGAEILEGSASGVGDLSGLPSGEVLETSASGVGDLSGLPSGEVLETTAPGVEDISG 994
Query: 82 EQPSGEQASGEQPSGEHASGEQASGAPISSTSTG 115
PSGE P E SG SG + +T+ G
Sbjct: 995 -LPSGEVLETTAPGVEDISG-LPSGEVLETTAPG 1026
Score = 30.8 bits (68), Expect = 0.76
Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 25 ELSGSIDHQTSVQQLPGEQPSGEQPSGEHL----SGEQPLSELESGEQPSDEQPSGEHGS 80
++SG + G + E PSGE L SG + LS L SGE+ + SG
Sbjct: 1372 DISGLPSGEVVETSASGIEDVSELPSGEGLETSASGVEDLSRLPSGEEVLEISASGFGDL 1431
Query: 81 GEQPSG----EQASGE-------QPSGEHASGEQASGA 107
PSG E ++ E PSG ASGA
Sbjct: 1432 SGLPSGGEGLETSASEVGTDLSGLPSGREGLETSASGA 1469
Score = 30.4 bits (67), Expect = 1.00
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 16/109 (14%)
Query: 19 TSSQPNELSG----SIDHQTSVQQLPGEQP--SGEQ---PSGEHLSGEQPLSELESGEQP 69
T+S +EL G I + LP + SG PSG LSG+ S SGE P
Sbjct: 1557 TASTASELEGRGTIGISGAGEISGLPSSELDISGRASGLPSGTELSGQASGSPDVSGEIP 1616
Query: 70 SDEQPSGEHGSGEQPSG-EQASGEQPSGEHASGEQASGAPISSTSTGTI 117
G G QPSG SGE SG + IS ++G +
Sbjct: 1617 ------GLFGVSGQPSGFPDTSGETSGVTELSGLSSGQPGISGEASGVL 1659
Score = 29.6 bits (65), Expect = 1.7
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 35 SVQQLPGEQPSGEQ---PSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE---- 87
SV+ P E+P + PS E + E+P + ++ SGE SG+
Sbjct: 814 SVELFPSEEPFPSKEPSPSEEPSASEEPYTPSPPVPSWTELPSSGEESGAPDVSGDFTGS 873
Query: 88 -QASGEQPSGEHASGEQASGAP 108
SG SG++ASG P
Sbjct: 874 GDVSGHLDFSGQLSGDRASGLP 895
>gi|66932943 variable charge, X chromosome [Homo sapiens]
Length = 206
Score = 38.5 bits (88), Expect = 0.004
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSD-- 71
G+ SQ EL + ++ V++ ++ E+P + E+PLS+ E+P
Sbjct: 98 GTQHDPLSQEAELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQE 157
Query: 72 ---EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQ 103
E+P + E+P +++ E+P + + E+
Sbjct: 158 SEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEE 192
Score = 38.1 bits (87), Expect = 0.005
Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 21 SQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSD-----EQPS 75
SQ +E+ + ++ V++ ++ E+P + E+PLS+ E+P E+P
Sbjct: 115 SQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPL 174
Query: 76 GEHGSGEQPSGEQASGEQPSGEHASGEQ 103
+ E+P +++ E+P + + E+
Sbjct: 175 SQESEMEEPLSQESQVEEPPSQESEMEE 202
Score = 32.7 bits (73), Expect = 0.20
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 30/118 (25%)
Query: 15 SARGTSSQPNELSGSIDHQTSVQQLPGEQPSGE--------------QPSGEHLSGEQPL 60
+A G S QP++ + +LP E+P E +P + E+PL
Sbjct: 72 AAPGPSDQPSQ-------ELPQHELPPEEPVSEGTQHDPLSQEAELEEPLSQESEVEEPL 124
Query: 61 SELESGEQPSD-----EQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTS 113
S+ E+P E+P + E+P +++ E+P + + E+ P+S S
Sbjct: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEE----PLSQES 178
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 37.4 bits (85), Expect = 0.008
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 115 GTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNL 174
GT L CY+C CL+ E TQ +QC +I G L + +GC C +
Sbjct: 18 GTALLCYSCKAQVSNEDCLQVENC--TQLGEQCWTARIRAVGLLTVISKGCSLNCVDDSQ 75
Query: 175 FSHGTRMQIICCRNQSFCN 193
+ + I CC + CN
Sbjct: 76 DYYVGKKNITCC-DTDLCN 93
>gi|47086459 prostate and testis expressed 2 [Homo sapiens]
Length = 113
Score = 37.0 bits (84), Expect = 0.011
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 116 TILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIF----EGGKL-QFMVQGCENMCP 170
T + CY C + G C +C ++ Q C ++ + +G + + C C
Sbjct: 27 TEIMCYECKKYH-LGLCYGVMTSCSLKHKQSCAVENFYILTRKGQSMYHYSKLSCMTSCE 85
Query: 171 SMNLFSHGTRMQIICCRNQSFCN 193
+N R+++ICC + ++CN
Sbjct: 86 DINFLGFTKRVELICCDHSNYCN 108
>gi|49087132 sal-like 2 [Homo sapiens]
Length = 1007
Score = 37.0 bits (84), Expect = 0.011
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 14 GSARGTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQ 73
G+A+ S+ + +SG+ S Q +QPS E E LS E+ + E E +DE
Sbjct: 730 GAAQENGSEQSTVSGA----GSFPQQQSQQPSPE----EELSEEEEEEDEEEEEDVTDED 781
Query: 74 PSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTST 114
G G + GE+A + E ASG + +++ +T
Sbjct: 782 SLA--GRGSESGGEKAISVRGDSEEASGAEEEVGTVAAAAT 820
>gi|139394599 hypermethylated in cancer 2 [Homo sapiens]
Length = 615
Score = 37.0 bits (84), Expect = 0.011
Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 19/117 (16%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGEQPSGE------------------QPSGEHLSGEQP 59
GT +P +L G+ D+ S+ + PG QP P +G +
Sbjct: 300 GTPDEPMDLEGAEDNHLSLLEAPGGQPRKSLRHSTRKKEWGKKEPVAGSPFERREAGPKG 359
Query: 60 LSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQP-SGEHASGEQASGAPISSTSTG 115
E GE D P+G SG PSG P E +G+ AS S S G
Sbjct: 360 PCPGEEGEGVGDRVPNGILASGAGPSGPYGEPPYPCKEEEENGKDASEDSAQSGSEG 416
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 36.6 bits (83), Expect = 0.014
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 28 GSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE 87
G ++ ++ E+ GE+ GE GE+ E E E + GE G GE+ E
Sbjct: 817 GEVEEGKGEREEEEEEGEGEEEEGE---GEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEE 873
Query: 88 -QASGEQPSGEHASGEQASG 106
+ GE+ GE E+ G
Sbjct: 874 GEGEGEEEEGEGEGEEEGEG 893
Score = 33.5 bits (75), Expect = 0.12
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 25 ELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQ-PSDEQPSGEHGSGEQ 83
E S +H ++ GE+ G GE+ L+E E ++ +EQ E G Q
Sbjct: 661 EGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQ 720
Query: 84 PSGEQASGEQPSGEHASGEQASG 106
Q E EH GE+ G
Sbjct: 721 KERNQEMEEGGEEEHGEGEEEEG 743
Score = 33.5 bits (75), Expect = 0.12
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHAS 100
GE+ GE E GE E E GE +E+ G GE+ GE GE GE
Sbjct: 895 GEEEEGEGEGEEEGEGE---GEEEEGEGKGEEEGEEGEGEGEEEEGE-GEGEDGEGE--- 947
Query: 101 GEQASG 106
GE+ G
Sbjct: 948 GEEEEG 953
Score = 32.7 bits (73), Expect = 0.20
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 47 EQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASG 106
E+ GE + GE+ E E GE+ +E+ +G+ GE+ G+Q GE+ E E+ G
Sbjct: 757 EEGEGEEVEGER---EKEEGERKKEER-AGKEEKGEE-EGDQGEGEEEETEGRGEEKEEG 811
Query: 107 API 109
+
Sbjct: 812 GEV 814
Score = 32.3 bits (72), Expect = 0.26
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 42 EQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEH--GSGEQPSGEQASGEQPSGEHA 99
E+ GE+ GE GE+ E E E+ + + GE G GE + GE+ GE
Sbjct: 845 EEGEGEEEEGEG-KGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGE 903
Query: 100 SGEQASG 106
E+ G
Sbjct: 904 GEEEGEG 910
Score = 32.3 bits (72), Expect = 0.26
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 41 GEQPSGE---QPSGEHLSGEQPLSELES-GEQPSDEQPSGEHGSGEQPSGEQASGEQPSG 96
GE+ GE + GE GE+ E E GE+ E E G GE GE+ GE
Sbjct: 849 GEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGE---GEEEEGEGEGE 905
Query: 97 EHASGE 102
E GE
Sbjct: 906 EEGEGE 911
Score = 32.3 bits (72), Expect = 0.26
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHAS 100
GE+ GE E GE E E GE +E+ GE GE+ GE E+
Sbjct: 878 GEEEEGEGEGEEEGEGE---GEEEEGEGEGEEEGEGE---GEEEEGEGKGEEEGEEGEGE 931
Query: 101 GEQASG 106
GE+ G
Sbjct: 932 GEEEEG 937
Score = 32.3 bits (72), Expect = 0.26
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 10/70 (14%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELES-GEQPSDEQPSGEHGSGE------QPSGEQASGEQ 93
GE GE GE GE E E GE + + GE G GE + GE+ GE+
Sbjct: 941 GEDGEGE---GEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEE 997
Query: 94 PSGEHASGEQ 103
E GE+
Sbjct: 998 EGEEEGEGEE 1007
Score = 32.0 bits (71), Expect = 0.34
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 41 GEQPSGEQPSGEHLSGE-QPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHA 99
GE+ E+ + GE Q E E G Q Q E G E GE+ G++ E
Sbjct: 692 GEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEK 751
Query: 100 SGE 102
GE
Sbjct: 752 EGE 754
Score = 32.0 bits (71), Expect = 0.34
Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 18 GTSSQPNELSGSIDHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPS-- 75
G + E G + + GE+ GE GE GE E E GE +E+
Sbjct: 902 GEGEEEGEGEGEEEEGEGKGEEEGEEGEGE---GEEEEGE---GEGEDGEGEGEEEEGEW 955
Query: 76 -GEHGSGEQPSGEQASGEQPSGEHASGEQASG 106
GE GE E+ GE GE GE+ G
Sbjct: 956 EGEEEEGEGEGEEEGEGEGEEGE-GEGEEEEG 986
Score = 31.6 bits (70), Expect = 0.45
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 42 EQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGE--HGSGEQPSGE---QASGEQPSG 96
++ GE GE G+ E E + +E+ GE G GE+ GE + GE+ G
Sbjct: 808 KEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEG 867
Query: 97 EHASGEQASG 106
E GE+ G
Sbjct: 868 EE-EGEEGEG 876
Score = 31.2 bits (69), Expect = 0.58
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 43 QPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGE 102
+ GE+ GE GE+ E E E + + GE G GE+ GE E+ GE GE
Sbjct: 859 EEEGEEGEGEE-EGEEGEGEGEEEEGEGEGEEEGE-GEGEEEEGEGEGEEEGEGE---GE 913
Query: 103 QASG 106
+ G
Sbjct: 914 EEEG 917
Score = 31.2 bits (69), Expect = 0.58
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELES---GEQPSDEQPSGEHGSGEQPSGEQASGEQPSGE 97
GE E+ GE GE E E GE+ E+ E G GE+ GE E+ GE
Sbjct: 962 GEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEE-EGEGEGEEEEEGE 1020
Query: 98 ---HASGEQASG 106
GE+ G
Sbjct: 1021 VEGEVEGEEGEG 1032
Score = 30.8 bits (68), Expect = 0.76
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGE-QPSGEHA 99
GE+ GE GE GE E E E+ +E E G GE E+ E + GE
Sbjct: 974 GEEGEGE---GEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEG 1030
Query: 100 SGE 102
GE
Sbjct: 1031 EGE 1033
Score = 30.4 bits (67), Expect = 1.00
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Query: 31 DHQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG---EHGSGEQPSG- 86
+ Q ++ G Q Q E E E E G++ +E+ G E G GE+ G
Sbjct: 708 EEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGE 767
Query: 87 -EQASGEQPSGEHASGEQ 103
E+ GE+ E A E+
Sbjct: 768 REKEEGERKKEERAGKEE 785
Score = 30.4 bits (67), Expect = 1.00
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGE-HGSGEQPSGEQASGEQPSGEHA 99
GE+ GE+ E GE E GE +E+ GE G E GE GE+ GE
Sbjct: 990 GEEEEGEEEGEEEGEGE------EEGEGEGEEEEEGEVEGEVEGEEGE-GEGEEEEGEEE 1042
Query: 100 SGEQ 103
E+
Sbjct: 1043 GEER 1046
Score = 29.6 bits (65), Expect = 1.7
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 46 GEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGE---QASGEQPSGEHASGE 102
GE+ GE GE+ E E GE+ + + GE E+ GE + GE+ GE GE
Sbjct: 981 GEEEEGEG-EGEEEEGE-EEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGE---GE 1035
Query: 103 QASG 106
+ G
Sbjct: 1036 EEEG 1039
Score = 29.3 bits (64), Expect = 2.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Query: 42 EQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSG--------EHGSGE-QPSGEQASGE 92
E+ +G++ GE G+Q E E E +E+ G E G GE + E+ GE
Sbjct: 778 EERAGKEEKGEE-EGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGE 836
Query: 93 QPSGEHASGEQASG 106
+ GE GE+ G
Sbjct: 837 EEEGE---GEEEEG 847
Score = 28.5 bits (62), Expect = 3.8
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 32 HQTSVQQLPGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASG 91
HQ Q E E GE G++ E + GE + + G E+ GE+
Sbjct: 719 HQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKK- 777
Query: 92 EQPSGEHASGEQ 103
E+ +G+ GE+
Sbjct: 778 EERAGKEEKGEE 789
Score = 27.7 bits (60), Expect = 6.5
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 41 GEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGE-QPSGEQASGEQPSGEHA 99
GE+ GE E E+ E E E+ E+ GE E + E+ +G++ GE
Sbjct: 731 GEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEE- 789
Query: 100 SGEQASG 106
G+Q G
Sbjct: 790 EGDQGEG 796
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 36.6 bits (83), Expect = 0.014
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 22 QPNELSGSIDHQTSVQQLPGEQP--SGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHG 79
QP + S Q +Q P +QP + +QP P S+L+ QP QP
Sbjct: 206 QPAPQAPSQSQQQPLQPTPPQQPPPASQQPPA-------PTSQLQQAPQPQQHQPHSHSQ 258
Query: 80 SGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILN 119
+ QPS Q S P S +P++ + ++N
Sbjct: 259 NQNQPSPTQQSSSPPQKPSQSPGHGLPSPLTPPNPLQLVN 298
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 36.2 bits (82), Expect = 0.018
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Query: 21 SQPNELSGSIDHQTSVQQLPG--EQPSGEQPS---GEHLSGEQPLSELESGEQPSDEQPS 75
S + SG H+ Q G + SG S G+H SG S E S +
Sbjct: 1094 SNSGQTSGFGQHRPGSGQSSGFGQYGSGSGQSSGFGQHGSGTGKSSGFAQHEYRSGQSSY 1153
Query: 76 GEHGSGEQPS---GEQASGEQPS---GEHASGE---QASGAPISSTSTGT 116
G+HG+G S G+ SG P+ G+H SG +SG IS + T
Sbjct: 1154 GQHGTGSSQSSGCGQHESGSGPTTSFGQHVSGSDNFSSSGQHISDSGQST 1203
Score = 34.3 bits (77), Expect = 0.069
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 6/97 (6%)
Query: 21 SQPNELSGSIDHQTSVQQLPG--EQPSGEQPS---GEHLSGEQPLSELESGEQPSDEQPS 75
S + SG H++S Q G + SG S G+H +G S E S +
Sbjct: 863 SSSGQTSGFGQHRSSSGQYSGFGQHGSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSY 922
Query: 76 GEHGSG-EQPSGEQASGEQPSGEHASGEQASGAPISS 111
G+HGSG Q SG G G+ SG+ SS
Sbjct: 923 GQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGSGQSS 959
Score = 32.3 bits (72), Expect = 0.26
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 51 GEH-LSGEQPLSELESGEQPSDEQPSGEHGSGE-QPSG----EQASGEQPSGEHASG-EQ 103
G+H LS Q S + G G+HGSG Q SG E SG+ G+H+SG Q
Sbjct: 720 GQHELSSGQSSSFGQHGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQ 779
Query: 104 ASG 106
+SG
Sbjct: 780 SSG 782
Score = 30.8 bits (68), Expect = 0.76
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 6/97 (6%)
Query: 21 SQPNELSGSIDHQTSVQQLPG--EQPSGEQPS---GEHLSGEQPLSELESGEQPSDEQPS 75
S + +G H++S Q G + SG S G+H +G S E S +
Sbjct: 1017 SSSGQTTGFGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSSY 1076
Query: 76 GEHGSG-EQPSGEQASGEQPSGEHASGEQASGAPISS 111
G+HGSG Q SG G G+ G+ SS
Sbjct: 1077 GQHGSGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQSS 1113
Score = 29.6 bits (65), Expect = 1.7
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 11/79 (13%)
Query: 41 GEQPSGEQPS---GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGE 97
G+ SG S G+H SG S E S + G+HGSG Q+SG G+
Sbjct: 808 GQYGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSG----SSQSSG---YGQ 860
Query: 98 HASGE-QASGAPISSTSTG 115
H S Q SG +S+G
Sbjct: 861 HGSSSGQTSGFGQHRSSSG 879
Score = 29.6 bits (65), Expect = 1.7
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 23/98 (23%)
Query: 41 GEQPSGEQPS---GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPS---GEQAS---- 90
G+ SG S G+H SG S E S + G+HGSG S G+ S
Sbjct: 962 GQHGSGSGQSSGFGQHESGSGKSSGFGQHESRSSQSNYGQHGSGSSQSSGYGQHGSSSGQ 1021
Query: 91 ----GEQPS--------GEHASG-EQASGAPISSTSTG 115
G+ S G+H SG +Q+SG T +G
Sbjct: 1022 TTGFGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTGSG 1059
Score = 29.3 bits (64), Expect = 2.2
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 51 GEH-LSGEQPLSELESGEQPSDEQPSGEHGSGE-QPSG----EQASGEQPSGEHASG-EQ 103
G+H L Q + G G+HGSG Q SG E SG+ G+H+SG Q
Sbjct: 568 GQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQ 627
Query: 104 ASG 106
+SG
Sbjct: 628 SSG 630
Score = 28.9 bits (63), Expect = 2.9
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 41 GEQPSGEQPS---GEHLSGEQPLSELESGEQPSDEQPSGEHGSGE-QPSG----EQASGE 92
G+ SG S G+H S S + G S G+HGS Q SG +SG+
Sbjct: 821 GQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTSGFGQHRSSSGQ 880
Query: 93 QPS-GEHASGE-QASGAPISSTSTG 115
G+H SG Q+SG T +G
Sbjct: 881 YSGFGQHGSGSGQSSGFGQHGTGSG 905
Score = 28.5 bits (62), Expect = 3.8
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 23/89 (25%)
Query: 41 GEQPSGEQPS---GEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSG----------- 86
G+ SG S G+H+SG S E S G+HG G S
Sbjct: 656 GQYGSGSGQSSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGSSSGQ 715
Query: 87 -------EQASGEQPS-GEHASGE-QASG 106
E +SG+ S G+H SG Q+SG
Sbjct: 716 TSGFGQHELSSGQSSSFGQHGSGSGQSSG 744
Score = 27.3 bits (59), Expect = 8.4
Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 11 YLLGSARGTSSQPNELSGSIDHQTSVQQLPGEQP---SGEQPSGEHLS-GEQPLSELESG 66
Y GS++ TS + H T + Q G + Q G+H S Q L + G
Sbjct: 419 YGSGSSQSTSFE--------QHGTGLSQSSGFEQHVCGSGQTCGQHESTSSQSLGYDQHG 470
Query: 67 EQPSDEQPSGEHGSGEQPS---GEQASGEQPS---GEHAS-GEQASG----APISSTSTG 115
G+HGSG S G+ SG S G+H S Q+SG +S S+G
Sbjct: 471 SSSGKTSGFGQHGSGSGQSSGFGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSG 530
>gi|50845399 lymphocyte antigen 6 complex G5B [Homo sapiens]
Length = 201
Score = 36.2 bits (82), Expect = 0.018
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 106 GAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGC 165
G + I C+ C + C+ G C +S CM+ I+ K++F+V+GC
Sbjct: 14 GFTVGKVPVPDIRTCHFCLVEDPSVGCISGSEKCTISSSSLCMVITIYYDVKVRFIVRGC 73
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,936,435
Number of Sequences: 37866
Number of extensions: 516513
Number of successful extensions: 4250
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 3058
Number of HSP's gapped (non-prelim): 982
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.