Guide to the Human Genome
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Name: ACN9 Sequence: fasta or formatted (125aa) NCBI GI: 9910180
Description:

ACN9 homolog

Referenced in:

Mitochondria

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6          7           1
 C cysteine            0.8          1           1
 D aspartate           4.8          6           1
 E glutamate           8.8         11           2
 F phenylalanine       5.6          7           1
 G glycine             4.8          6           1
 H histidine           2.4          3           1
 I isoleucine          1.6          2           1
 K lysine              7.2          9           1
 L leucine            10.4         13           2
 M methionine          2.4          3           1
 N asparagine          4.0          5           1
 P proline             4.8          6           2
 Q glutamine           9.6         12           2
 R arginine            8.8         11           2
 S serine              5.6          7           1
 T threonine           4.0          5           1
 V valine              5.6          7           1
 W tryptophan          0.8          1           1
 Y tyrosine            2.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ACN9 homolog 
ANXA5                 0.031   annexin 5 
MRPS27                0.026   mitochondrial ribosomal protein S27 
BSN                   0.026   bassoon protein 
LYRM2                 0.026   LYR motif containing 2 
LOC730429             0.017   PREDICTED: similar to ubiquitin protein ligase E3 c...
LOC730429             0.017   PREDICTED: similar to ubiquitin protein ligase E3 c...
LOC100287219          0.017   PREDICTED: hypothetical protein XP_002342512, parti...
MED8                  0.017   mediator complex subunit 8 isoform 3 
UBR5                  0.017   ubiquitin protein ligase E3 component n-recognin 5 [...
MED8                  0.017   mediator complex subunit 8 isoform 1 
ANKRD17               0.013   ankyrin repeat domain protein 17 isoform a 
LOC100289661          0.009   PREDICTED: hypothetical protein 
LOC100289661          0.009   PREDICTED: hypothetical protein XP_002343723 
SLC39A14              0.009   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.009   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.009   solute carrier family 39 (zinc transporter), member...
SLC39A14              0.009   solute carrier family 39 (zinc transporter), member...
TMF1                  0.009   TATA element modulatory factor 1 
AXIN2                 0.009   axin 2 
RNF40                 0.009   ring finger protein 40 
HSCB                  0.004   J-type co-chaperone HSC20 
JMJD7-PLA2G4B         0.004   JMJD7-PLA2G4B protein 
ADCY9                 0.004   adenylate cyclase 9 
MESP2                 0.004   mesoderm posterior 2 homolog 
DNAI1                 0.004   dynein, axonemal, intermediate chain 1 
PLA2G4B               0.004   phospholipase A2, group IVB 
RNF14                 0.004   ring finger protein 14 isoform 1 
RNF14                 0.004   ring finger protein 14 isoform 1 
RNF14                 0.004   ring finger protein 14 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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