MED8 5742

Name: MED8	Sequence: fasta or formatted (301aa)		NCBI GI: 155030190
Description: mediator complex subunit 8 isoform 3		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [268aa] mediator complex subunit 8 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 23 2 C cysteine 1.0 3 1 D aspartate 3.7 11 1 E glutamate 6.3 19 2 F phenylalanine 2.3 7 1 G glycine 8.3 25 2 H histidine 1.7 5 1 I isoleucine 3.7 11 2 K lysine 7.3 22 2 L leucine 12.0 36 2 M methionine 2.7 8 1 N asparagine 4.3 13 1 P proline 6.6 20 1 Q glutamine 8.6 26 3 R arginine 4.7 14 2 S serine 8.3 25 2 T threonine 4.3 13 2 V valine 5.0 15 2 W tryptophan 1.0 3 1 Y tyrosine 0.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 mediator complex subunit 8 isoform 3 MED8 0.883 mediator complex subunit 8 isoform 1 TTN 0.021 titin isoform novex-2 TTN 0.021 titin isoform novex-1 TTN 0.021 titin isoform N2-B LOC100294010 0.021 PREDICTED: hypothetical protein LOC100291514 0.021 PREDICTED: hypothetical protein XP_002347163 LOC100289311 0.021 PREDICTED: hypothetical protein XP_002343026 EP300 0.019 E1A binding protein p300 BSN 0.017 bassoon protein HCN4 0.014 hyperpolarization activated cyclic nucleotide-gated p... MED25 0.014 mediator complex subunit 25 ZNF746 0.014 zinc finger protein 746 CAMSAP1L1 0.014 calmodulin regulated spectrin-associated protein 1-l... ZNF652 0.012 zinc finger protein 652 ZNF652 0.012 zinc finger protein 652 ZNF683 0.012 zinc finger protein 683 ZNF683 0.012 zinc finger protein 683 EVPL 0.012 envoplakin LOC100293631 0.012 PREDICTED: similar to solute carrier family 4 (anio... LOC100288436 0.012 PREDICTED: similar to solute carrier family 4 (anio... LOC100288436 0.012 PREDICTED: hypothetical protein XP_002342928 AP1GBP1 0.010 AP1 gamma subunit binding protein 1 isoform 2 AP1GBP1 0.010 AP1 gamma subunit binding protein 1 isoform 1 CPD 0.010 carboxypeptidase D precursor C6orf97 0.010 hypothetical protein LOC80129 PHOX2B 0.010 paired-like homeobox 2b SYCP2L 0.010 synaptonemal complex protein 2-like FGA 0.009 fibrinogen, alpha polypeptide isoform alpha prepropr... FGA 0.009 fibrinogen, alpha polypeptide isoform alpha-E preprop... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.