Guide to the Human Genome
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Name: PLA2G4B Sequence: fasta or formatted (781aa) NCBI GI: 167860120
Description:

phospholipase A2, group IVB

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         55           3
 C cysteine            2.4         19           1
 D aspartate           4.4         34           2
 E glutamate           7.7         60           2
 F phenylalanine       4.5         35           2
 G glycine             5.9         46           3
 H histidine           3.1         24           1
 I isoleucine          2.2         17           1
 K lysine              3.1         24           2
 L leucine            13.7        107           2
 M methionine          0.9          7           1
 N asparagine          2.8         22           2
 P proline             6.7         52           2
 Q glutamine           6.7         52           2
 R arginine            6.3         49           3
 S serine              7.4         58           3
 T threonine           5.1         40           2
 V valine              6.0         47           2
 W tryptophan          1.8         14           1
 Y tyrosine            2.4         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase A2, group IVB 
JMJD7-PLA2G4B         0.997   JMJD7-PLA2G4B protein 
PLA2G4D               0.472   phospholipase A2, group IVD 
PLA2G4E               0.384   phospholipase A2, group 4E 
PLA2G4F               0.356   phospholipase A2, group IVF 
PLA2G4A               0.137   cytosolic phospholipase A2, group IVA 
PLA2G4C               0.089   phospholipase A2, group IVC isoform 3 
PLA2G4C               0.089   phospholipase A2, group IVC isoform 2 precursor [Ho...
PLA2G4C               0.089   phospholipase A2, group IVC isoform 1 precursor [Ho...
SYT7                  0.020   synaptotagmin VII 
NEDD4L                0.018   neural precursor cell expressed, developmentally do...
NEDD4L                0.018   neural precursor cell expressed, developmentally do...
SYT6                  0.018   synaptotagmin VI 
NEDD4L                0.018   neural precursor cell expressed, developmentally dow...
NEDD4L                0.018   neural precursor cell expressed, developmentally do...
NEDD4                 0.017   neural precursor cell expressed, developmentally do...
LOC100132214          0.017   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.017   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.017   PREDICTED: similar to calcium-promoted Ras inactiva...
LOC100132214          0.017   PREDICTED: similar to calcium-promoted Ras inactiva...
RASA4                 0.017   RAS p21 protein activator 4 isoform 2 
RASA4                 0.017   RAS p21 protein activator 4 isoform 1 
UNC13A                0.016   unc-13 homolog A 
UNC13B                0.015   UNC13 (C. elegans)-like 
UNC13C                0.015   unc-13 homolog C 
SYT10                 0.015   synaptotagmin X 
MCTP2                 0.014   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MCTP2                 0.014   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP2                 0.014   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
SYT3                  0.013   synaptotagmin III 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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