Guide to the Human Genome
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Name: KPNA2 Sequence: fasta or formatted (529aa) NCBI GI: 4504897
Description:

karyopherin alpha 2

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         46           2
 C cysteine            1.1          6           1
 D aspartate           5.3         28           2
 E glutamate           6.4         34           4
 F phenylalanine       2.8         15           1
 G glycine             5.9         31           2
 H histidine           1.5          8           2
 I isoleucine          7.0         37           2
 K lysine              5.3         28           2
 L leucine             9.8         52           2
 M methionine          1.5          8           1
 N asparagine          6.2         33           2
 P proline             4.9         26           2
 Q glutamine           4.9         26           2
 R arginine            4.0         21           4
 S serine              6.6         35           2
 T threonine           6.8         36           2
 V valine              8.3         44           2
 W tryptophan          1.3          7           1
 Y tyrosine            1.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   karyopherin alpha 2 
KPNA7                 0.510   karyopherin 7 
KPNA4                 0.480   karyopherin alpha 4 
KPNA3                 0.466   karyopherin alpha 3 
KPNA5                 0.425   karyopherin alpha 5 
KPNA6                 0.419   karyopherin alpha 6 
KPNA1                 0.407   karyopherin alpha 1 
SPAG6                 0.043   sperm associated antigen 6 isoform 1 
SPAG6                 0.043   sperm associated antigen 6 isoform 2 
TMCO6                 0.030   transmembrane and coiled-coil domains 6 
ARMC4                 0.030   armadillo repeat containing 4 
ANKAR                 0.029   ankyrin and armadillo repeat containing 
CTNNB1                0.028   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.028   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.028   catenin (cadherin-associated protein), beta 1, 88kDa ...
RAP1GDS1              0.028   RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [...
RAP1GDS1              0.028   RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [...
JUP                   0.026   junction plakoglobin 
JUP                   0.026   junction plakoglobin 
ARMC8                 0.025   armadillo repeat containing 8 isoform 2 
ARMC3                 0.022   armadillo repeat containing 3 
TRIP12                0.022   thyroid hormone receptor interactor 12 
RAP1GDS1              0.019   RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [...
RAP1GDS1              0.019   RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [...
RAP1GDS1              0.019   RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [...
PKP4                  0.017   plakophilin 4 isoform b 
PKP4                  0.017   plakophilin 4 isoform a 
ARMC8                 0.013   armadillo repeat containing 8 isoform 3 
ARMC8                 0.013   armadillo repeat containing 8 isoform 1 
PSMD5                 0.012   proteasome 26S non-ATPase subunit 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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