Guide to the Human Genome
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Name: GIMAP4 Sequence: fasta or formatted (329aa) NCBI GI: 8922873
Description:

GTPase, IMAP family member 4

Referenced in:

Additional Guanine Nucleotide-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         27           2
 C cysteine            1.2          4           1
 D aspartate           4.0         13           2
 E glutamate          11.9         39           3
 F phenylalanine       2.7          9           1
 G glycine             6.1         20           1
 H histidine           1.8          6           1
 I isoleucine          6.1         20           2
 K lysine              7.9         26           2
 L leucine             9.1         30           3
 M methionine          2.7          9           1
 N asparagine          2.7          9           2
 P proline             3.0         10           1
 Q glutamine           5.8         19           2
 R arginine            8.2         27           1
 S serine              5.2         17           3
 T threonine           5.8         19           1
 V valine              4.6         15           3
 W tryptophan          0.3          1           1
 Y tyrosine            2.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GTPase, IMAP family member 4 
GIMAP7                0.290   GTPase, IMAP family member 7 
GIMAP1                0.260   GTPase, IMAP family member 1 
GIMAP5                0.248   GTPase, IMAP family member 5 
GIMAP6                0.242   GTPase, IMAP family member 6 
GIMAP2                0.234   GTPase, IMAP family member 2 
GIMAP8                0.197   GTPase, IMAP family member 8 
ERAL1                 0.044   Era-like 1 
CDC2L1                0.044   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L2                0.042   cell division cycle 2-like 2 isoform 4 
TNIK                  0.042   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.042   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.042   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.042   TRAF2 and NCK interacting kinase isoform 3 
ITSN2                 0.042   intersectin 2 isoform 3 
ITSN2                 0.042   intersectin 2 isoform 1 
ITSN2                 0.042   intersectin 2 isoform 2 
LOC645202             0.040   PREDICTED: hypothetical protein LOC645202 
MAP4K4                0.040   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.040   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.040   mitogen-activated protein kinase kinase kinase kinas...
INCENP                0.040   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.040   inner centromere protein antigens 135/155kDa isofor...
CDC2L2                0.039   cell division cycle 2-like 2 isoform 1 
LOC100133220          0.039   PREDICTED: hypothetical protein 
GIGYF2                0.037   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.037   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.037   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.037   GRB10 interacting GYF protein 2 isoform b 
CDC2L1                0.037   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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