Guide to the Human Genome
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Name: KPNA7 Sequence: fasta or formatted (516aa) NCBI GI: 224589129
Description:

karyopherin 7

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         43           2
 C cysteine            2.1         11           1
 D aspartate           4.3         22           1
 E glutamate           7.0         36           3
 F phenylalanine       2.1         11           1
 G glycine             4.8         25           2
 H histidine           1.7          9           2
 I isoleucine          6.6         34           2
 K lysine              5.4         28           2
 L leucine            13.8         71           2
 M methionine          1.7          9           1
 N asparagine          4.8         25           1
 P proline             5.0         26           2
 Q glutamine           6.0         31           2
 R arginine            4.3         22           3
 S serine              6.4         33           3
 T threonine           5.6         29           1
 V valine              7.4         38           2
 W tryptophan          1.2          6           1
 Y tyrosine            1.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   karyopherin 7 
KPNA2                 0.526   karyopherin alpha 2 
KPNA4                 0.408   karyopherin alpha 4 
KPNA3                 0.407   karyopherin alpha 3 
KPNA1                 0.359   karyopherin alpha 1 
KPNA6                 0.358   karyopherin alpha 6 
KPNA5                 0.352   karyopherin alpha 5 
SPAG6                 0.055   sperm associated antigen 6 isoform 1 
SPAG6                 0.055   sperm associated antigen 6 isoform 2 
TMCO6                 0.041   transmembrane and coiled-coil domains 6 
ANKAR                 0.037   ankyrin and armadillo repeat containing 
CTNNB1                0.029   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.029   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.029   catenin (cadherin-associated protein), beta 1, 88kDa ...
ARMC8                 0.029   armadillo repeat containing 8 isoform 2 
ARMC3                 0.028   armadillo repeat containing 3 
RAP1GDS1              0.027   RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [...
RAP1GDS1              0.027   RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [...
RAP1GDS1              0.023   RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [...
RAP1GDS1              0.023   RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [...
RAP1GDS1              0.023   RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [...
PKP4                  0.019   plakophilin 4 isoform b 
PKP4                  0.019   plakophilin 4 isoform a 
RAP1GDS1              0.019   RAP1, GTP-GDP dissociation stimulator 1 isoform 6 [...
TTC12                 0.017   tetratricopeptide repeat domain 12 
ARMC4                 0.017   armadillo repeat containing 4 
JUP                   0.015   junction plakoglobin 
JUP                   0.015   junction plakoglobin 
ARMC8                 0.014   armadillo repeat containing 8 isoform 3 
ARMC8                 0.014   armadillo repeat containing 8 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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