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Search of human proteins with 91932795
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|91932795 transmembrane protein 10 isoform b [Homo sapiens]
(118 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|91932795 transmembrane protein 10 isoform b [Homo sapiens] 241 1e-64
gi|15082236 transmembrane protein 10 isoform a [Homo sapiens] 239 4e-64
gi|91932793 transmembrane protein 10 isoform c [Homo sapiens] 239 4e-64
gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens] 37 0.004
gi|11138123 cholinergic receptor, nicotinic, alpha 10 [Homo sapi... 30 0.41
gi|11641231 ectodysplasin A receptor precursor [Homo sapiens] 30 0.41
gi|52630342 major histocompatibility complex, class I, C precurs... 29 0.70
gi|4502263 activating transcription factor 3 isoform 1 [Homo sap... 29 0.70
gi|95102483 activating transcription factor 3 isoform 2 [Homo sa... 29 0.70
gi|71902536 activating transcription factor 3 isoform 1 [Homo sa... 29 0.70
gi|21314764 Fc receptor-like 3 precursor [Homo sapiens] 27 2.6
gi|116812586 leucine zipper protein 5 [Homo sapiens] 27 3.5
gi|110349721 titin isoform novex-3 [Homo sapiens] 27 4.5
gi|110349719 titin isoform N2-A [Homo sapiens] 27 4.5
gi|110349717 titin isoform novex-2 [Homo sapiens] 27 4.5
gi|110349713 titin isoform novex-1 [Homo sapiens] 27 4.5
gi|110349715 titin isoform N2-B [Homo sapiens] 27 4.5
gi|46487911 zinc finger protein 406 isoform ZFAT-1 [Homo sapiens] 26 5.9
gi|71480169 zinc finger protein 406 isoform TR-ZFAT [Homo sapiens] 26 5.9
gi|57222338 microfibrillar-associated protein 3-like isoform 2 [... 26 5.9
gi|153792329 microfibrillar-associated protein 3-like isoform 1 ... 26 5.9
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 26 7.7
>gi|91932795 transmembrane protein 10 isoform b [Homo sapiens]
Length = 118
Score = 241 bits (614), Expect = 1e-64
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 1 MDCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISE 60
MDCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISE
Sbjct: 1 MDCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISE 60
Query: 61 NPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE 118
NPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE
Sbjct: 61 NPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE 118
>gi|15082236 transmembrane protein 10 isoform a [Homo sapiens]
Length = 141
Score = 239 bits (609), Expect = 4e-64
Identities = 117/117 (100%), Positives = 117/117 (100%)
Query: 2 DCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISEN 61
DCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISEN
Sbjct: 25 DCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISEN 84
Query: 62 PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE 118
PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE
Sbjct: 85 PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE 141
>gi|91932793 transmembrane protein 10 isoform c [Homo sapiens]
Length = 131
Score = 239 bits (609), Expect = 4e-64
Identities = 117/117 (100%), Positives = 117/117 (100%)
Query: 2 DCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISEN 61
DCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISEN
Sbjct: 15 DCGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISEN 74
Query: 62 PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE 118
PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE
Sbjct: 75 PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTIEMERRRGLWWLVPRLSLE 131
>gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens]
Length = 373
Score = 36.6 bits (83), Expect = 0.004
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 6 SLGLAAG-IPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPK 57
S+G+ AG + +VA ALL+ LL L+ RR+ E EE +RP EI E + PK
Sbjct: 230 SIGMVAGAVTGIVAGALLIFLLVWLLIRRKDK-ERYEEEERPNEIREDAEAPK 281
>gi|11138123 cholinergic receptor, nicotinic, alpha 10 [Homo
sapiens]
Length = 450
Score = 30.0 bits (66), Expect = 0.41
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 3 CGPSLGLAAGIPLLVATALLVALLFTLIHRRRSSIEAMEESDRPCEISEIDDNPKISENP 62
CGPS+ +P LL L L R R E +S RP E+S +P+ P
Sbjct: 325 CGPSV---RPVPAWARALLLGHLARGLCVRERG--EPCGQS-RPPELSPSPQSPEGGAGP 378
Query: 63 RRSPTHEKNTMGAQEAHI-YVKTVAGS 88
P HE + QEA + +V T+A +
Sbjct: 379 PAGPCHEPRCLCRQEALLHHVATIANT 405
>gi|11641231 ectodysplasin A receptor precursor [Homo sapiens]
Length = 448
Score = 30.0 bits (66), Expect = 0.41
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 6 SLGLAAGIPLLVATALLVALLFTLIHRRRS-----------SIEAM--------EESDRP 46
+L +A ++A A+++ ++F ++ + S S+EA E D
Sbjct: 187 ALIIAMSTIFIMAIAIVLIIMFYILKTKPSAPACCTSHPGKSVEAQVSKDEEKKEAPDNV 246
Query: 47 CEISEIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDR 95
SE D+ K++ P + PT +N ++ + ++V EEP D+
Sbjct: 247 VMFSEKDEFEKLTATPAK-PTKSENDASSENEQLLSRSVDSDEEPAPDK 294
>gi|52630342 major histocompatibility complex, class I, C precursor
[Homo sapiens]
Length = 366
Score = 29.3 bits (64), Expect = 0.70
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 5 PSLGLAAGIPLLVATALLVALLFTLIHRRRSS 36
P +G+ AG+ +LV A+L A++ ++ RR+SS
Sbjct: 307 PIMGIVAGLAVLVVLAVLGAVVTAMMCRRKSS 338
>gi|4502263 activating transcription factor 3 isoform 1 [Homo
sapiens]
Length = 181
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 29 LIHRRRSSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGA 75
L HR S++E++ SDRP +S E+ R+ E+N + A
Sbjct: 54 LCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAA 100
>gi|95102483 activating transcription factor 3 isoform 2 [Homo
sapiens]
Length = 135
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 29 LIHRRRSSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGA 75
L HR S++E++ SDRP +S E+ R+ E+N + A
Sbjct: 54 LCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAA 100
>gi|71902536 activating transcription factor 3 isoform 1 [Homo
sapiens]
Length = 181
Score = 29.3 bits (64), Expect = 0.70
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 29 LIHRRRSSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGA 75
L HR S++E++ SDRP +S E+ R+ E+N + A
Sbjct: 54 LCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAA 100
>gi|21314764 Fc receptor-like 3 precursor [Homo sapiens]
Length = 734
Score = 27.3 bits (59), Expect = 2.6
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 10 AAGIPLLVATALLVALLFTLIH-----RRRSSIEAMEESDR-PCEISEIDDNPKISENPR 63
AAGI LV + L++A L+H R+ + A S P E E + +P+
Sbjct: 574 AAGITGLVLSILVLAAAAALLHYARARRKPGGLSATGTSSHSPSECQEPSSSRPSRIDPQ 633
Query: 64 RSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDR 95
PTH K + +Y G P++ +
Sbjct: 634 E-PTHSKPLAPMELEPMYSNVNPGDSNPIYSQ 664
>gi|116812586 leucine zipper protein 5 [Homo sapiens]
Length = 1143
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 62 PRRSPTHEKNTMGAQEAHIYVKTVAGSEEPVHDRYRPTI 100
PRRSP H K H K G EE ++ Y+P +
Sbjct: 297 PRRSPVHSKVREVLSYFHHQKKVRQGVEEMLYRLYKPIL 335
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 26.6 bits (57), Expect = 4.5
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 48 EISEIDDNPKISENPRRSPTHEKNTMG-AQEAHIYVKTVAGSEEPVHDRYRPTIEMERRR 106
E+S + PKI E + T+G +AH V+ V G +P + Y+ +++ER
Sbjct: 2070 ELSPSMEAPKIFERI------QSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSD 2122
Query: 107 GLWWLVP 113
++W P
Sbjct: 2123 RIYWYWP 2129
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 26.6 bits (57), Expect = 4.5
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 48 EISEIDDNPKISENPRRSPTHEKNTMG-AQEAHIYVKTVAGSEEPVHDRYRPTIEMERRR 106
E+S + PKI E + T+G +AH V+ V G +P + Y+ +++ER
Sbjct: 2070 ELSPSMEAPKIFERI------QSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSD 2122
Query: 107 GLWWLVP 113
++W P
Sbjct: 2123 RIYWYWP 2129
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 26.6 bits (57), Expect = 4.5
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 48 EISEIDDNPKISENPRRSPTHEKNTMG-AQEAHIYVKTVAGSEEPVHDRYRPTIEMERRR 106
E+S + PKI E + T+G +AH V+ V G +P + Y+ +++ER
Sbjct: 2024 ELSPSMEAPKIFERI------QSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSD 2076
Query: 107 GLWWLVP 113
++W P
Sbjct: 2077 RIYWYWP 2083
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 26.6 bits (57), Expect = 4.5
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 48 EISEIDDNPKISENPRRSPTHEKNTMG-AQEAHIYVKTVAGSEEPVHDRYRPTIEMERRR 106
E+S + PKI E + T+G +AH V+ V G +P + Y+ +++ER
Sbjct: 2024 ELSPSMEAPKIFERI------QSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSD 2076
Query: 107 GLWWLVP 113
++W P
Sbjct: 2077 RIYWYWP 2083
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 26.6 bits (57), Expect = 4.5
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 48 EISEIDDNPKISENPRRSPTHEKNTMG-AQEAHIYVKTVAGSEEPVHDRYRPTIEMERRR 106
E+S + PKI E + T+G +AH V+ V G +P + Y+ +++ER
Sbjct: 2024 ELSPSMEAPKIFERI------QSQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIERSD 2076
Query: 107 GLWWLVP 113
++W P
Sbjct: 2077 RIYWYWP 2083
>gi|46487911 zinc finger protein 406 isoform ZFAT-1 [Homo sapiens]
Length = 1243
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 38 EAMEESDRPCEIS-EIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPV 92
EA ESD E + DD K S+ PR T + + +EA + ++G+++P+
Sbjct: 148 EAGNESDLELEKKCKEDDREKASKRPRSQKTEKVQKISGKEA----RQLSGAKKPI 199
>gi|71480169 zinc finger protein 406 isoform TR-ZFAT [Homo sapiens]
Length = 846
Score = 26.2 bits (56), Expect = 5.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 38 EAMEESDRPCEIS-EIDDNPKISENPRRSPTHEKNTMGAQEAHIYVKTVAGSEEPV 92
EA ESD E + DD K S+ PR T + + +EA + ++G+++P+
Sbjct: 136 EAGNESDLELEKKCKEDDREKASKRPRSQKTEKVQKISGKEA----RQLSGAKKPI 187
>gi|57222338 microfibrillar-associated protein 3-like isoform 2
[Homo sapiens]
Length = 306
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 35 SSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGAQEAHI 80
+S E E P E+ + P E + TH+KNT E+H+
Sbjct: 261 TSTELTSEEPTPVEVPDKVLPPAYLEATEPAVTHDKNTCIIYESHV 306
>gi|153792329 microfibrillar-associated protein 3-like isoform 1
[Homo sapiens]
Length = 409
Score = 26.2 bits (56), Expect = 5.9
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 35 SSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGAQEAHI 80
+S E E P E+ + P E + TH+KNT E+H+
Sbjct: 364 TSTELTSEEPTPVEVPDKVLPPAYLEATEPAVTHDKNTCIIYESHV 409
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 25.8 bits (55), Expect = 7.7
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 33 RRSSIEAMEESDRPCEISEIDDNPKISENPRRSPTHEKNTMGAQEAH 79
++ E EE DR E +P+ S +PRRSP ++ +E H
Sbjct: 241 KKDGKEGAEEIDRHVERRR-SRSPRRSLSPRRSPRRSRSRSHHREGH 286
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,521,349
Number of Sequences: 37866
Number of extensions: 175712
Number of successful extensions: 605
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 588
Number of HSP's gapped (non-prelim): 26
length of query: 118
length of database: 18,247,518
effective HSP length: 88
effective length of query: 30
effective length of database: 14,915,310
effective search space: 447459300
effective search space used: 447459300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.