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Search of human proteins with 91598939
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|91598939 secreted phosphoprotein 1 isoform c [Homo sapiens]
(287 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|91598939 secreted phosphoprotein 1 isoform c [Homo sapiens] 585 e-167
gi|91206462 secreted phosphoprotein 1 isoform a [Homo sapiens] 571 e-163
gi|4759166 secreted phosphoprotein 1 isoform b [Homo sapiens] 553 e-158
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 76 4e-14
gi|16445033 ACRC protein [Homo sapiens] 51 1e-06
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 49 5e-06
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 49 5e-06
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 48 1e-05
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 48 1e-05
gi|42740903 MTERF domain containing 2 [Homo sapiens] 47 1e-05
gi|55956788 nucleolin [Homo sapiens] 47 1e-05
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 47 1e-05
gi|115529449 upstream binding transcription factor, RNA polymera... 47 1e-05
gi|115529451 upstream binding transcription factor, RNA polymera... 47 1e-05
gi|7657671 upstream binding transcription factor, RNA polymerase... 47 1e-05
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo... 46 4e-05
gi|210032580 SET domain containing 1B [Homo sapiens] 45 1e-04
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 44 1e-04
gi|217330641 IWS1 homolog [Homo sapiens] 44 2e-04
gi|119395727 cardiac calsequestrin 2 precursor [Homo sapiens] 43 3e-04
gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens] 42 5e-04
gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens] 42 5e-04
gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens] 42 5e-04
gi|4504487 histidine rich calcium binding protein precursor [Hom... 42 8e-04
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 41 0.001
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 41 0.001
gi|24415404 MDN1, midasin homolog [Homo sapiens] 41 0.001
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 40 0.002
gi|4507241 structure specific recognition protein 1 [Homo sapiens] 40 0.002
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 40 0.002
>gi|91598939 secreted phosphoprotein 1 isoform c [Homo sapiens]
Length = 287
Score = 585 bits (1509), Expect = e-167
Identities = 287/287 (100%), Positives = 287/287 (100%)
Query: 1 MRIAVICFCLLGITCAIPVKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDD 60
MRIAVICFCLLGITCAIPVKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDD
Sbjct: 1 MRIAVICFCLLGITCAIPVKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDD 60
Query: 61 MDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFT 120
MDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFT
Sbjct: 61 MDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFT 120
Query: 121 PVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPV 180
PVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPV
Sbjct: 121 PVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPV 180
Query: 181 AQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELS 240
AQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELS
Sbjct: 181 AQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELS 240
Query: 241 KVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSEVN 287
KVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSEVN
Sbjct: 241 KVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSEVN 287
>gi|91206462 secreted phosphoprotein 1 isoform a [Homo sapiens]
Length = 314
Score = 571 bits (1471), Expect = e-163
Identities = 287/314 (91%), Positives = 287/314 (91%), Gaps = 27/314 (8%)
Query: 1 MRIAVICFCLLGITCAIPVKQADSGSSEEKQ---------------------------NA 33
MRIAVICFCLLGITCAIPVKQADSGSSEEKQ NA
Sbjct: 1 MRIAVICFCLLGITCAIPVKQADSGSSEEKQLYNKYPDAVATWLNPDPSQKQNLLAPQNA 60
Query: 34 VSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQS 93
VSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQS
Sbjct: 61 VSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQS 120
Query: 94 DESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQ 153
DESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQ
Sbjct: 121 DESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQ 180
Query: 154 YPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSH 213
YPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSH
Sbjct: 181 YPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSH 240
Query: 214 KQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKF 273
KQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKF
Sbjct: 241 KQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKF 300
Query: 274 RISHELDSASSEVN 287
RISHELDSASSEVN
Sbjct: 301 RISHELDSASSEVN 314
>gi|4759166 secreted phosphoprotein 1 isoform b [Homo sapiens]
Length = 300
Score = 553 bits (1424), Expect = e-158
Identities = 276/300 (92%), Positives = 279/300 (93%), Gaps = 13/300 (4%)
Query: 1 MRIAVICFCLLGITCAIPVKQADSGSSEEKQ-------------NAVSSEETNDFKQETL 47
MRIAVICFCLLGITCAIPVKQADSGSSEEKQ N S++ N +TL
Sbjct: 1 MRIAVICFCLLGITCAIPVKQADSGSSEEKQLYNKYPDAVATWLNPDPSQKQNLLAPQTL 60
Query: 48 PSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVT 107
PSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVT
Sbjct: 61 PSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVT 120
Query: 108 DFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHME 167
DFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHME
Sbjct: 121 DFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHME 180
Query: 168 SEELNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDES 227
SEELNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDES
Sbjct: 181 SEELNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDES 240
Query: 228 NEHSDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSEVN 287
NEHSDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSEVN
Sbjct: 241 NEHSDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSEVN 300
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 75.9 bits (185), Expect = 4e-14
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
+DS S + N+ S +++D + S S++S+D + D D + DS +S DS+DS
Sbjct: 753 SDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDS 812
Query: 82 DDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLR 141
D D+D S+ SD S+ SD SD + +D + D+ DG
Sbjct: 813 SDSSDSDSSNSSDSSNSSDSSDSSNSSDSSD------------SSDSSDG---------- 850
Query: 142 SKSKKFRRPD-IQYPDATD-EDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYE 199
S S R D D++D D ++ +S + + + ++ + ++ + DS DS
Sbjct: 851 SDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSN 910
Query: 200 TSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHED 256
+S D S + S + S + +S+ SD DS + S S +S + + D
Sbjct: 911 SSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSD 967
Score = 67.4 bits (163), Expect = 1e-11
Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 8/265 (3%)
Query: 22 ADSGSSEEKQNAVSSEETN--DFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN 79
+DS SS+ ++ SS+ +N D + + S ++ S D + D D D +S DS +S+
Sbjct: 901 SDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSS 960
Query: 80 DSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYG 139
DS + D+ DS+ SD S S+ SD + +D + + + D+ D S
Sbjct: 961 DSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSS---- 1016
Query: 140 LRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYE 199
S D++D +S + + D + SD S DS +
Sbjct: 1017 -NSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSD-SSDSSDSSD 1074
Query: 200 TSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDMLV 259
+S D S + S S + +S++ SD DS + S S +S + D
Sbjct: 1075 SSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSD 1134
Query: 260 VDPKSKEEDKHLKFRISHELDSASS 284
S D S DS+ S
Sbjct: 1135 SSDSSNSSDSSDSSESSDSSDSSDS 1159
Score = 64.7 bits (156), Expect = 9e-11
Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 9/235 (3%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND- 80
+DS S + N+ S +++D S+ S+ + D D + D DS +S DS+D
Sbjct: 687 SDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDS 746
Query: 81 SDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGL 140
SD + +D S SD S+ SD SD + +D + + D+ D S
Sbjct: 747 SDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNS 806
Query: 141 RSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYET 200
S D++D D ++ +S + + + + ++ D DS
Sbjct: 807 SDSSDS--------SDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNR 858
Query: 201 SQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHE 255
S + S + S S + +SNE S+ DS + S S S +S +
Sbjct: 859 SDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSD 913
Score = 63.9 bits (154), Expect = 2e-10
Identities = 67/276 (24%), Positives = 108/276 (39%), Gaps = 19/276 (6%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
+D+ S + N+ +S +++D + S S++S + D D D + +S DS DS+DS
Sbjct: 651 SDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDS 710
Query: 82 DDVDDTDDSH----QSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVV 137
D D +D S+ SD S+ SD SD + +D + + + D+ + S
Sbjct: 711 DSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDS 770
Query: 138 YGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWD------ 191
S D + + S S+ N + + D + SD D
Sbjct: 771 SDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSS-----DSSDSSDSSDSDSSNSSD 825
Query: 192 -SRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESN--EHSDVIDSQELSKVSREFHS 248
S DS ++S D S + S S +D SN + SD DS S S S
Sbjct: 826 SSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDS 885
Query: 249 HEFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASS 284
+E + D S + D S DS++S
Sbjct: 886 NESSNSSDS-SDSSNSSDSDSSDSSNSSDSSDSSNS 920
Score = 63.5 bits (153), Expect = 2e-10
Identities = 61/264 (23%), Positives = 98/264 (37%), Gaps = 3/264 (1%)
Query: 23 DSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSD 82
DS S+ + N+ S+ N+ + S S + D D D + DS DS DS+ SD
Sbjct: 514 DSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSD 573
Query: 83 DVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRS 142
+D +S S +SD + +D + + + D+ D + DS S
Sbjct: 574 SNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDS 633
Query: 143 --KSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYET 200
K D D++D +S + + + D ++ SD S DS ++
Sbjct: 634 SDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSD-SSNSSDSSDS 692
Query: 201 SQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDMLVV 260
S + S + S S ++D SN +S DS S S +S + D
Sbjct: 693 SDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNS 752
Query: 261 DPKSKEEDKHLKFRISHELDSASS 284
S D S DS+ S
Sbjct: 753 SDSSDSSDSSNSSDSSDSSDSSDS 776
Score = 62.0 bits (149), Expect = 6e-10
Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 14/264 (5%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDH-MDDMDDEDDDDHVDSQDSIDSND 80
+DS SS+ ++ SS+ ++ ++ S ++S D D D D D +S DS DS+D
Sbjct: 550 SDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSD 609
Query: 81 SDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGL 140
S D D+ DS S ESD +D +D + + D+ D S
Sbjct: 610 SSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSN-------SSDSSDNSDSSDSSNS 662
Query: 141 RSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYET 200
+ S D ++ + S S+ + + + + D + SD DS DS ++
Sbjct: 663 SNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSS--ESSDSSDSSDSDS--SDSSDS 718
Query: 201 SQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDMLVV 260
S + S+++ S S + +S++ SD +S + S S +S + D
Sbjct: 719 S--NSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDS 776
Query: 261 DPKSKEEDKHLKFRISHELDSASS 284
S D + S DS++S
Sbjct: 777 SDSSNSSDSNDSSNSSDSSDSSNS 800
Score = 59.7 bits (143), Expect = 3e-09
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
+DS S + ++ S ++D + S S++S D D D D D DS DS DS+DS
Sbjct: 1163 SDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1222
Query: 82 DDVDDTDDSHQ-SDESHHSDESD 103
D D+ DS++ SD S SD SD
Sbjct: 1223 SDSSDSSDSNESSDSSDSSDSSD 1245
Score = 57.8 bits (138), Expect = 1e-08
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
+DS S ++ S +++D + S S++S D D D D D DS DS DS+DS
Sbjct: 1172 SDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDS 1231
Query: 82 DD-VDDTDDSHQSDESHHSDESD 103
++ D +D S SD S+ SD SD
Sbjct: 1232 NESSDSSDSSDSSDSSNSSDSSD 1254
Score = 53.9 bits (128), Expect = 2e-07
Identities = 51/222 (22%), Positives = 88/222 (39%), Gaps = 5/222 (2%)
Query: 21 QADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND 80
++DS S+ K ++ S ++D + S S+ S + D D D D S DS +S+D
Sbjct: 630 ESDSSDSDSKSDS-SDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSD 688
Query: 81 SDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGL 140
S D D+ +S +S +S SD SD +D + + + D+ D S
Sbjct: 689 SSDSSDSSNSSESSDS--SDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDS 746
Query: 141 RSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYET 200
S D + + S S+ + + + ++ S S DS +
Sbjct: 747 SDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNS 806
Query: 201 SQLDDQSAETHSHKQSRLYKRKAND--ESNEHSDVIDSQELS 240
S D S + S + ++D +S+ SD DS + S
Sbjct: 807 SDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSS 848
Score = 50.8 bits (120), Expect = 1e-06
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
+DS S + ++ S +++D + S SNES D D D D + DS DS DS+DS
Sbjct: 1202 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDS 1261
Query: 82 -DDVDDTDDSHQSDESHHSDESD 103
D +D DS + +++ SD
Sbjct: 1262 TSDSNDESDSQSKSGNGNNNGSD 1284
Score = 50.1 bits (118), Expect = 2e-06
Identities = 61/263 (23%), Positives = 104/263 (39%), Gaps = 20/263 (7%)
Query: 23 DSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSD 82
+S S++ N S+ D ++ S +N S + + + DD+D DS +DS
Sbjct: 494 NSDESKDNGNGSDSKGAEDDDSDST-SDTNNSDSNGNGNNGNDDNDKSDSGKG--KSDSS 550
Query: 83 DVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRS 142
D D +D S+ SD S SD SD ++ +D +++ + D+ D S
Sbjct: 551 DSDSSDSSNSSDSSDSSD-SDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSD 609
Query: 143 KSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSD-WDSRGKDSYETS 201
S D++D +S +S+ + K+ + D ++ SD DS DS + S
Sbjct: 610 SS-----------DSSDSSDSSDSKSD----SSKSESDSSDSDSKSDSSDSNSSDSSDNS 654
Query: 202 QLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDMLVVD 261
D S ++S S + S++ S+ DS + S S S + D D
Sbjct: 655 DSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSD 714
Query: 262 PKSKEEDKHLKFRISHELDSASS 284
S+ DS+ S
Sbjct: 715 SSDSSNSNSSDSDSSNSSDSSDS 737
Score = 47.8 bits (112), Expect = 1e-05
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
+DS S + ++ S +++D + S S++S D + D D D DS +S DS+DS
Sbjct: 1196 SDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDS 1255
Query: 82 DDVDD-TDDSH-QSDESHHSDESDELVTDFPTD 112
D D T DS+ +SD S + +D +D
Sbjct: 1256 SDSSDSTSDSNDESDSQSKSGNGNNNGSDSDSD 1288
Score = 43.9 bits (102), Expect = 2e-04
Identities = 51/270 (18%), Positives = 103/270 (38%), Gaps = 32/270 (11%)
Query: 21 QADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND 80
Q D +S ++ N +++ N S+ + S++ + D+ + D ++D +D
Sbjct: 461 QGDDPNSSDESNG--NDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAED----DD 514
Query: 81 SDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGL 140
SD DT++S + ++ ++ ++ D+ G+ DS
Sbjct: 515 SDSTSDTNNSDSNGNGNNGNDDND--------------------KSDSGKGKSDSSDSDS 554
Query: 141 RSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDW-----DSRGK 195
S D D++D + +S +S + + + + + D + SD S
Sbjct: 555 SDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSS 614
Query: 196 DSYETSQLDDQSAETHSHKQSRLYKRKAND-ESNEHSDVIDSQELSKVSREFHSHEFHSH 254
DS ++S S+++ S K ++D S++ SD DS + S S S +
Sbjct: 615 DSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDS 674
Query: 255 EDMLVVDPKSKEEDKHLKFRISHELDSASS 284
D S D S+ +S+ S
Sbjct: 675 SDSSSSSDSSNSSDSSDSSDSSNSSESSDS 704
Score = 43.1 bits (100), Expect = 3e-04
Identities = 20/82 (24%), Positives = 38/82 (46%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
+DS S + ++ S +++D + S S++S D D D D + S N +
Sbjct: 1220 SDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGN 1279
Query: 82 DDVDDTDDSHQSDESHHSDESD 103
++ D+D + +S+HS D
Sbjct: 1280 NNGSDSDSDSEGSDSNHSTSDD 1301
Score = 35.8 bits (81), Expect = 0.045
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Query: 23 DSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSD 82
D GS +++ EE + K + SK E DH EDD D Q+S DS +
Sbjct: 256 DEGSGDDED-----EEAGNGKDSSNNSKGQEGQDH----GKEDDHDSSIGQNS-DSKEYY 305
Query: 83 DVDDTDDSHQSDESHHSDESDELVTDFPTD 112
D + +D H + + +S+E P D
Sbjct: 306 DPEGKEDPHNEVDGDKTSKSEENSAGIPED 335
Score = 33.1 bits (74), Expect = 0.29
Identities = 52/224 (23%), Positives = 78/224 (34%), Gaps = 35/224 (15%)
Query: 67 DDHVDSQDSIDSNDS----DDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPV 122
D + D DS D +D DD + +D+S+ +D++ + ESD
Sbjct: 444 DSNSDGYDSYDFDDKSMQGDDPNSSDESNGNDDA--NSESD------------------- 482
Query: 123 VPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQ 182
+ RGD+ SK D + + D D TS + + NG
Sbjct: 483 ----NNSSSRGDASYNSDESKDNG-NGSDSKGAEDDDSDSTSDTNNSDSNGNGNN---GN 534
Query: 183 DLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKV 242
D N SD +GK S D S + S S +N S+ S DS + S
Sbjct: 535 DDNDKSD-SGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDS 593
Query: 243 SREFHSHEFHSHEDMLVVDPKSKEEDKHLKFRIS-HELDSASSE 285
S+ S + D + K S E DS+ S+
Sbjct: 594 DSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSD 637
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 50.8 bits (120), Expect = 1e-06
Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 31/221 (14%)
Query: 18 PVKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDED--DDDHVDSQDS 75
P+ +D + ++ N + + N E S++S D+ DD + DD+ DS+
Sbjct: 120 PIVISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAP 179
Query: 76 IDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDS 135
D++D DV D D+S S + + D SD+ D +D+P + VP D DS
Sbjct: 180 DDNSDDSDVPD-DNSDDSSDDNSDDSSDDNSDD--SDVPDDKSDDSDVPD----DSSDDS 232
Query: 136 VVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAP---SDWDS 192
V S D + PD + +D + +S + D AP SD
Sbjct: 233 DVPDDSS-------DDSEAPDDSSDDSEAPDDSSD------------DSEAPDDSSDDSE 273
Query: 193 RGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDV 233
DS + S+ D S++ +A D+ ++ SDV
Sbjct: 274 APDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDV 314
Score = 45.8 bits (107), Expect = 4e-05
Identities = 51/238 (21%), Positives = 86/238 (36%), Gaps = 14/238 (5%)
Query: 17 IPVKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSI 76
+P +D + + + S ++ P +++ + DD D+ D +S DS
Sbjct: 138 VPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSS 197
Query: 77 DSNDSDDVDDTDDSHQ--SDESHHSDESDELVTDFPTDLPATEVFTPVVP--TVDTYDGR 132
D N D DD D D+S SD D+ D +D+P P + D +
Sbjct: 198 DDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDD--SDVPDDSSDDSEAPDDSSDDSEAP 255
Query: 133 GDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDS 192
DS S++ D + PD + +D S + + + + + D AP D
Sbjct: 256 DDS---SDDSEAPDDSSDDSEAPDDSSDD--SEASDDSSDDSEASDDSSDDSEAP---DD 307
Query: 193 RGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHE 250
+ DS D S + A D NE D +EL + + H+
Sbjct: 308 KSDDSDVPEDKSDDSDVPDDNSDDLEVPVPAEDLCNEGQIASDEEELVEAAAAVSQHD 365
Score = 40.8 bits (94), Expect = 0.001
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 24/213 (11%)
Query: 28 EEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDT 87
+E +S ++ +D L + S D D+ DD + D D+ D +++ D D++
Sbjct: 117 QEPPIVISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPD--DNSDDSEAPD-DNS 173
Query: 88 DDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKF 147
DDS D+ +SD+SD V D +D + + + D+ D D S
Sbjct: 174 DDSEAPDD--NSDDSD--VPDDNSDDSSDD------NSDDSSDDNSDD------SDVPDD 217
Query: 148 RRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAP---SDWDSRGKDSYETSQLD 204
+ D PD + +D S + + + + + D AP SD DS + S+
Sbjct: 218 KSDDSDVPDDSSDD--SDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAP 275
Query: 205 DQSAETHSHKQSRLYKRKANDESNEHSDVIDSQ 237
D S++ +A+D+S++ S+ D +
Sbjct: 276 DDSSDDSEASDDSSDDSEASDDSSDDSEAPDDK 308
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 48.9 bits (115), Expect = 5e-06
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 28 EEKQNAVSSEETNDFKQETLPS-KSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDD 86
++K + EET D ++ ++ S + E +H DD +DEDD+D D D D +D +D +D
Sbjct: 223 KQKDIQRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDDED 282
Query: 87 TDDSHQSDESHH 98
+D + ++ +
Sbjct: 283 EEDGEEENQKRY 294
Score = 41.6 bits (96), Expect = 8e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 19 VKQADSGSSEEKQNAV-SSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSID 77
+++ D +++ ++ +V SSEE D + E E D DD DD+DDDD D +D D
Sbjct: 227 IQRTDEETTDNQEGSVESSEEGEDQEHED----DGEDEDDEDDDDDDDDDDDDDDEDDED 282
Query: 78 SNDSDD 83
D ++
Sbjct: 283 EEDGEE 288
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 48.9 bits (115), Expect = 5e-06
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 21 QADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND 80
+ADS S +E ++ +E+ ++ K+E + +E +D D D+ED++ + ++ I+ D
Sbjct: 81 KADSSSVDECDDSDGTEDMDE-KEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEED 139
Query: 81 SDDVDDTDDSHQSDESHHSDESDE 104
DD +D +D +E +E +E
Sbjct: 140 EDDDEDGEDVEDEEEEEEEEEEEE 163
Score = 36.6 bits (83), Expect = 0.026
Identities = 15/75 (20%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 23 DSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSD 82
D EE + SE+ ++ E + + + +++++ED+DD D +D D + +
Sbjct: 98 DMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEE-EEIEEEDEDDDEDGEDVEDEEEEE 156
Query: 83 DVDDTDDSHQSDESH 97
+ ++ ++ + +E H
Sbjct: 157 EEEEEEEEEEENEDH 171
Score = 35.0 bits (79), Expect = 0.076
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 20 KQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN 79
K+ D G + N +E D + E + E + D+ DDED +D D ++ +
Sbjct: 102 KEEDEGEEYSEDNDEPGDE--DEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEE 159
Query: 80 DSDDVDDTDDSHQ 92
+ ++ ++ ++ HQ
Sbjct: 160 EEEEEEEENEDHQ 172
Score = 31.2 bits (69), Expect = 1.1
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 58 MDDMDDEDDDDHVDSQDSIDSND-SDDVDDTDDSHQSDESHHSDESDEL 105
+D+ DD D + +D ++ + + S+D D+ D + DE +E +E+
Sbjct: 87 VDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEI 135
Score = 30.4 bits (67), Expect = 1.9
Identities = 42/213 (19%), Positives = 74/213 (34%), Gaps = 51/213 (23%)
Query: 80 DSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYG 139
DS VD+ DDS +++ +E + D P E D D GD
Sbjct: 83 DSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDE---------DEEDEEGD----- 128
Query: 140 LRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYE 199
R + ++ D + D ED+ E EE ++ E
Sbjct: 129 -REEEEEIEEED-EDDDEDGEDVEDEEEEEE------------------------EEEEE 162
Query: 200 TSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDS------QELSKVS-----REFHS 248
+ +++ + + H + + +D +N+ D D L K++ R
Sbjct: 163 EEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAKSLLNLGKIAEDAAYRARTE 222
Query: 249 HEFHSHEDMLVVDPKSKEEDKHLKFRISHELDS 281
E +S+ + D K E+ K +S +LDS
Sbjct: 223 SEMNSNTSNSLEDDSDKNENLGRKSELSLDLDS 255
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 47.8 bits (112), Expect = 1e-05
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 21 QADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND 80
Q DS SSEE + S ++ ++E S+S+ES + ++ + +D++ SQ+ + S+
Sbjct: 378 QEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHS 437
Query: 81 SDDVDDTDDSHQSDESHHSDESDELVTD 108
S +++SH ++ S +S D
Sbjct: 438 SSAESQSEESHSEEDDSDSQDSSRSKED 465
Score = 45.4 bits (106), Expect = 6e-05
Identities = 74/320 (23%), Positives = 124/320 (38%), Gaps = 47/320 (14%)
Query: 1 MRIAVICFCLLGITCAIPVKQADSGSSEEKQNAVSSEETNDF--KQETLPSKSNESHD-- 56
M+I+++ L G++CA+PV + + SE+ SEE + T P +S+ES +
Sbjct: 1 MKISILLMFLWGLSCALPVTRYQNNESED------SEEWKGHLAQAPTPPLESSESSEGS 54
Query: 57 --HMDDMDDEDDDDHVDSQDSIDSND------------------SDDVDDTDDSHQSDES 96
++ +ED D S++ + S+D DD DD D+ D++
Sbjct: 55 KVSSEEQANEDPSDSTQSEEGLGSDDHQYIYRLAGGFSRSTGKGGDDKDD-DEDDSGDDT 113
Query: 97 HHSDESDELVTDFP----TDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDI 152
D+S D + L + E + + +G S+S++ D
Sbjct: 114 FGDDDSGPGPKDRQEGGNSRLGSDEDSDDTIQASEESAPQGQDSAQDTTSESRELDNEDR 173
Query: 153 QYPDATDEDITSHMESEE--LNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAET 210
D T ESEE + G D S+ D G S + + +S
Sbjct: 174 VDSKPEGGDSTQESESEEHWVGGGSDGESSHGD---GSELDDEGMQSDDPESI--RSERG 228
Query: 211 HSHKQSRLYKRKANDESNEHSDVID---SQELSKVSREFHSHEFHSHED--MLVVDPKSK 265
+S S K K + E++E ++ D SQ L SR+ S ED + D +
Sbjct: 229 NSRMNSAGMKSKESGENSEQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTM 288
Query: 266 EEDKHLKFRISHELDSASSE 285
EE K S+ D+ S+
Sbjct: 289 EEVKSDSTENSNSRDTGLSQ 308
Score = 42.0 bits (97), Expect = 6e-04
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 20 KQADSGSSE----EKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDS 75
+QADS SSE +++ S E+ N QE L S S+ + ++ E+DD DSQDS
Sbjct: 402 EQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEESHSEEDDS--DSQDS 459
Query: 76 IDSNDSDDVDDTDDSHQSDE 95
S +D + T+ S+E
Sbjct: 460 --SRSKEDSNSTESKSSSEE 477
Score = 39.3 bits (90), Expect = 0.004
Identities = 59/276 (21%), Positives = 105/276 (38%), Gaps = 44/276 (15%)
Query: 19 VKQADSGSSEEKQNAVSS--EETNDFKQETLPSKSNESH-DHMDDMDDEDDDDHVDSQDS 75
+K +SG + E+ N S + + + KS S D ++DD + + V S +
Sbjct: 237 MKSKESGENSEQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSDST 296
Query: 76 IDSNDSDDV------DDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTY 129
+SN D D DS + + + S E + V D P++E +
Sbjct: 297 ENSNSRDTGLSQPRRDSKGDSQEDSKENLSQEESQNV-----DGPSSE---------SSQ 342
Query: 130 DGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSD 189
+ S S+ + PD T TS++E +E + + S+
Sbjct: 343 EANLSSQENSSESQEEVVSESRGDNPDPT----TSYVEDQEDSDS-------------SE 385
Query: 190 WDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSH 249
DS S+ S+ ++ A++ S + + +E+S + + S E S
Sbjct: 386 EDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSE 445
Query: 250 EFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSE 285
E HS ED D S++ + + S E S+S E
Sbjct: 446 ESHSEED----DSDSQDSSRSKEDSNSTESKSSSEE 477
Score = 37.7 bits (86), Expect = 0.012
Identities = 59/247 (23%), Positives = 97/247 (39%), Gaps = 54/247 (21%)
Query: 36 SEETNDFKQETLPSKSNESHDHMDD-----MDDEDDDDHVDSQDSIDSNDSDDVD----- 85
SE ++ E + S S E+ + D D D DS++++ +S +VD
Sbjct: 280 SELDDNNTMEEVKSDSTENSNSRDTGLSQPRRDSKGDSQEDSKENLSQEESQNVDGPSSE 339
Query: 86 DTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSK 145
+ +++ S + + S+ +E+V++ D P + T V + D + + L S SK
Sbjct: 340 SSQEANLSSQENSSESQEEVVSESRGDNP--DPTTSYVEDQEDSDSSEEDSSHTL-SHSK 396
Query: 146 KFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDD 205
R + Q + E + ES E +P D +S S E Q
Sbjct: 397 SESREE-QADSESSESLNFSEESPE---------------SPEDENS---SSQEGLQSHS 437
Query: 206 QSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSK 265
SAE+ S +ES+ D DSQ+ S+ + +S E S S
Sbjct: 438 SSAESQS------------EESHSEEDDSDSQDSSRSKEDSNSTESKS----------SS 475
Query: 266 EEDKHLK 272
EED LK
Sbjct: 476 EEDGQLK 482
Score = 31.2 bits (69), Expect = 1.1
Identities = 42/225 (18%), Positives = 85/225 (37%), Gaps = 31/225 (13%)
Query: 18 PVKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSID 77
P + + S E+ + +S EE+ + + S+S++ + + + + V S+ D
Sbjct: 309 PRRDSKGDSQEDSKENLSQEESQNVDGPS--SESSQEANLSSQENSSESQEEVVSESRGD 366
Query: 78 SND--SDDVDDTDDSHQSDE--SHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRG 133
+ D + V+D +DS S+E SH S + D ++E + ++ +
Sbjct: 367 NPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDEN 426
Query: 134 DSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSR 193
S GL+S S A + SH E ++ + S SR
Sbjct: 427 SSSQEGLQSHSS----------SAESQSEESHSEEDD---------------SDSQDSSR 461
Query: 194 GKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQE 238
K+ +++ S E K + RK ++ + + D +
Sbjct: 462 SKEDSNSTESKSSSEEDGQLKNIEIESRKLTVDAYHNKPIGDQDD 506
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 47.8 bits (112), Expect = 1e-05
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 21 QADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND 80
Q DS SSEE + S ++ ++E S+S+ES + ++ + +D++ SQ+ + S+
Sbjct: 362 QEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHS 421
Query: 81 SDDVDDTDDSHQSDESHHSDESDELVTD 108
S +++SH ++ S +S D
Sbjct: 422 SSAESQSEESHSEEDDSDSQDSSRSKED 449
Score = 47.0 bits (110), Expect = 2e-05
Identities = 74/314 (23%), Positives = 116/314 (36%), Gaps = 51/314 (16%)
Query: 1 MRIAVICFCLLGITCAIPVKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDD 60
M+I+++ L G++CA+PV + + SE+ S E Q P +NE D D
Sbjct: 1 MKISILLMFLWGLSCALPVTRYQNNESED-----SEEWKGHLAQAPTPPLANE--DPSDS 53
Query: 61 MDDED---DDDHV-----------------DSQDSIDSNDSDDVDDTDDSHQSDESHHSD 100
E+ DDH D +D + + DD DDS +
Sbjct: 54 TQSEEGLGSDDHQYIYRLAGGFSRSTGKGGDDKDDDEDDSGDDTFGDDDSGPGPKDRQEG 113
Query: 101 ESDELVTDFPTD--LPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDAT 158
+ L +D +D + A+E P +G S+S++ D
Sbjct: 114 GNSRLGSDEDSDDTIQASEESAP----------QGQDSAQDTTSESRELDNEDRVDSKPE 163
Query: 159 DEDITSHMESEE--LNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQS 216
D T ESEE + G D S+ D G S + + +S +S S
Sbjct: 164 GGDSTQESESEEHWVGGGSDGESSHGD---GSELDDEGMQSDDPESI--RSERGNSRMNS 218
Query: 217 RLYKRKANDESNEHSDVID---SQELSKVSREFHSHEFHSHED--MLVVDPKSKEEDKHL 271
K K + E++E ++ D SQ L SR+ S ED + D + EE K
Sbjct: 219 AGMKSKESGENSEQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSD 278
Query: 272 KFRISHELDSASSE 285
S+ D+ S+
Sbjct: 279 STENSNSRDTGLSQ 292
Score = 42.0 bits (97), Expect = 6e-04
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 20 KQADSGSSE----EKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDS 75
+QADS SSE +++ S E+ N QE L S S+ + ++ E+DD DSQDS
Sbjct: 386 EQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEESHSEEDDS--DSQDS 443
Query: 76 IDSNDSDDVDDTDDSHQSDE 95
S +D + T+ S+E
Sbjct: 444 --SRSKEDSNSTESKSSSEE 461
Score = 39.3 bits (90), Expect = 0.004
Identities = 59/276 (21%), Positives = 105/276 (38%), Gaps = 44/276 (15%)
Query: 19 VKQADSGSSEEKQNAVSS--EETNDFKQETLPSKSNESH-DHMDDMDDEDDDDHVDSQDS 75
+K +SG + E+ N S + + + KS S D ++DD + + V S +
Sbjct: 221 MKSKESGENSEQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSDST 280
Query: 76 IDSNDSDDV------DDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTY 129
+SN D D DS + + + S E + V D P++E +
Sbjct: 281 ENSNSRDTGLSQPRRDSKGDSQEDSKENLSQEESQNV-----DGPSSE---------SSQ 326
Query: 130 DGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSD 189
+ S S+ + PD T TS++E +E + + S+
Sbjct: 327 EANLSSQENSSESQEEVVSESRGDNPDPT----TSYVEDQEDSDS-------------SE 369
Query: 190 WDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSH 249
DS S+ S+ ++ A++ S + + +E+S + + S E S
Sbjct: 370 EDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSE 429
Query: 250 EFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSE 285
E HS ED D S++ + + S E S+S E
Sbjct: 430 ESHSEED----DSDSQDSSRSKEDSNSTESKSSSEE 461
Score = 37.7 bits (86), Expect = 0.012
Identities = 59/247 (23%), Positives = 97/247 (39%), Gaps = 54/247 (21%)
Query: 36 SEETNDFKQETLPSKSNESHDHMDD-----MDDEDDDDHVDSQDSIDSNDSDDVD----- 85
SE ++ E + S S E+ + D D D DS++++ +S +VD
Sbjct: 264 SELDDNNTMEEVKSDSTENSNSRDTGLSQPRRDSKGDSQEDSKENLSQEESQNVDGPSSE 323
Query: 86 DTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSK 145
+ +++ S + + S+ +E+V++ D P + T V + D + + L S SK
Sbjct: 324 SSQEANLSSQENSSESQEEVVSESRGDNP--DPTTSYVEDQEDSDSSEEDSSHTL-SHSK 380
Query: 146 KFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDD 205
R + Q + E + ES E +P D +S S E Q
Sbjct: 381 SESREE-QADSESSESLNFSEESPE---------------SPEDENS---SSQEGLQSHS 421
Query: 206 QSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSK 265
SAE+ S +ES+ D DSQ+ S+ + +S E S S
Sbjct: 422 SSAESQS------------EESHSEEDDSDSQDSSRSKEDSNSTESKS----------SS 459
Query: 266 EEDKHLK 272
EED LK
Sbjct: 460 EEDGQLK 466
Score = 31.2 bits (69), Expect = 1.1
Identities = 42/225 (18%), Positives = 85/225 (37%), Gaps = 31/225 (13%)
Query: 18 PVKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSID 77
P + + S E+ + +S EE+ + + S+S++ + + + + V S+ D
Sbjct: 293 PRRDSKGDSQEDSKENLSQEESQNVDGPS--SESSQEANLSSQENSSESQEEVVSESRGD 350
Query: 78 SND--SDDVDDTDDSHQSDE--SHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRG 133
+ D + V+D +DS S+E SH S + D ++E + ++ +
Sbjct: 351 NPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPEDEN 410
Query: 134 DSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSR 193
S GL+S S A + SH E ++ + S SR
Sbjct: 411 SSSQEGLQSHSS----------SAESQSEESHSEEDD---------------SDSQDSSR 445
Query: 194 GKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQE 238
K+ +++ S E K + RK ++ + + D +
Sbjct: 446 SKEDSNSTESKSSSEEDGQLKNIEIESRKLTVDAYHNKPIGDQDD 490
>gi|42740903 MTERF domain containing 2 [Homo sapiens]
Length = 381
Score = 47.4 bits (111), Expect = 1e-05
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 35 SSEETNDFKQ----ETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDS 90
S EE FK+ E S+S+ S D +D+++DDD + D D+++ DD +D D++
Sbjct: 309 SVEEFQVFKKLLAREEEESESSTSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDEA 368
Query: 91 HQSDESHHSDESD 103
+DE DE +
Sbjct: 369 EDNDEDEDDDEEE 381
Score = 42.0 bits (97), Expect = 6e-04
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 30 KQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDD 89
++ S T+D K+ +L ++ + +D DD D+DD + D + ND D+ DD ++
Sbjct: 322 REEEESESSTSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDEAEDNDEDEDDDEEE 381
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 47.4 bits (111), Expect = 1e-05
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 59/152 (38%)
Query: 16 AIPVKQADSGSSEEKQNAVSSEETNDFKQE----------------------TLPSKSNE 53
AIP K A +G + +K++ S EE +D +E + ++E
Sbjct: 128 AIPAKGAKNGKNAKKED--SDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASE 185
Query: 54 SHDHMDDMDDEDDDDHVDS-----------------------------------QDSIDS 78
D DD DDEDDDD + +D D
Sbjct: 186 DEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDE 245
Query: 79 NDSDDVDDTDDSHQSDESHHSDESDELVTDFP 110
+D DD DD DD + DE +E +E V + P
Sbjct: 246 DDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAP 277
Score = 35.4 bits (80), Expect = 0.058
Identities = 41/199 (20%), Positives = 69/199 (34%), Gaps = 40/199 (20%)
Query: 43 KQETLPSKS--NESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDD----------S 90
K +P+K N + +D D+E+DDD +D D D D+ +D +
Sbjct: 125 KGAAIPAKGAKNGKNAKKEDSDEEEDDD--SEEDEEDDEDEDEDEDEIEPAAMKAAAAAP 182
Query: 91 HQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRP 150
DE DE DE D D E ++T +G + K+K
Sbjct: 183 ASEDEDDEDDEDDEDDDDDEEDDSEEE-------AMETTPAKGKKAAKVVPVKAKNVAED 235
Query: 151 DIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAET 210
+ + D DED + E D D + E + ++ E
Sbjct: 236 EDEEEDDEDEDDDDDEDDE-------------------DDDDEDDEEEEEEEEEEPVKEA 276
Query: 211 HSHKQSRLYKRKANDESNE 229
++ + K+KA E+ +
Sbjct: 277 PGKRKKEMAKQKAAPEAKK 295
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 47.4 bits (111), Expect = 1e-05
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 19/106 (17%)
Query: 28 EEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDT 87
E+ N + E+ + QE S SNE D D ++E+++D D Q+ + + D+ DD
Sbjct: 2401 EDSMNILDPEDEEEHTQEEDSSGSNEDEDDSQDEEEEEEEDEEDDQEDDEGEEGDEDDDD 2460
Query: 88 DDSH-QSDESH------------HSDESDELVTDF------PTDLP 114
D S + DE + D D+L+ +F TD+P
Sbjct: 2461 DGSEMELDEDYPDMNASPLVRFERFDREDDLIIEFDNMFSSATDIP 2506
Score = 45.8 bits (107), Expect = 4e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 24 SGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN-DSD 82
SG E +++ + E ++ Q + + E D M+ +D ED+++H +DS SN D D
Sbjct: 2372 SGEDESQEDVLMDEAPSNLSQASTLQANRE--DSMNILDPEDEEEHTQEEDSSGSNEDED 2429
Query: 83 DVDDTDDSHQSDES--HHSDESDE 104
D D ++ + DE DE +E
Sbjct: 2430 DSQDEEEEEEEDEEDDQEDDEGEE 2453
Score = 28.9 bits (63), Expect = 5.4
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Query: 20 KQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN 79
++ SGS+E++ ++ EE + +E + ++ + D+ DD+D + +D D N
Sbjct: 2418 EEDSSGSNEDEDDSQDEEEEEEEDEED--DQEDDEGEEGDEDDDDDGSEMELDEDYPDMN 2475
Query: 80 DSDDVDDTDDSHQSDESHHSDESDELVTDFP 110
S V + D D TD P
Sbjct: 2476 ASPLVRFERFDREDDLIIEFDNMFSSATDIP 2506
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 47.4 bits (111), Expect = 1e-05
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 46 TLPSKSNESHDHMDDMDDEDDDDHV----------DSQDSIDSNDSDDVDDTDDSHQSDE 95
TL SKS D +D DDED+D+ D DS +S+ D+ +D D++ + DE
Sbjct: 633 TLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDE 692
Query: 96 SHHSDESDE 104
DE D+
Sbjct: 693 DEDDDEDDD 701
Score = 46.2 bits (108), Expect = 3e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 32 NAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSH 91
N SS T K E+ + D +D ++EDD++ S+D DS++S D+++D
Sbjct: 626 NPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGD 685
Query: 92 QSDESHHSDESDE 104
+++E ++ DE
Sbjct: 686 ENEEDDEDEDDDE 698
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 28 EEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDT 87
E+ +N SSE+ D + + +S + ++ +D +DEDDD+ +D +D D+
Sbjct: 658 EDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDE----------DDDEDEDNE 707
Query: 88 DDSHQSDESHHSDESD 103
+ S S D SD
Sbjct: 708 SEGSSSSSSSSGDSSD 723
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 23 DSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSD 82
D EE+++ + + + D + S +ES D D ++EDD+D D +D + D++
Sbjct: 650 DEDEDEEEEDDENGDSSEDGGDSSESSSEDESED--GDENEEDDEDEDDDEDDDEDEDNE 707
Query: 83 DVDDTDDSHQSDESHHSDES 102
+ S S +S SD +
Sbjct: 708 SEGSSSSSSSSGDSSDSDSN 727
Score = 38.9 bits (89), Expect = 0.005
Identities = 18/82 (21%), Positives = 35/82 (42%)
Query: 20 KQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN 79
K + + + ++ EE D + E + +E+ D +D D + D + D N
Sbjct: 628 KSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDEN 687
Query: 80 DSDDVDDTDDSHQSDESHHSDE 101
+ DD D+ DD ++ + E
Sbjct: 688 EEDDEDEDDDEDDDEDEDNESE 709
Score = 38.9 bits (89), Expect = 0.005
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 21 QADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND 80
Q+ S S E+ + E+ ++ +++ S+E + ED+ + D + D ++
Sbjct: 635 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDE 694
Query: 81 SDDVDDTDDSHQSDESHHSDES 102
DD DD +D E S S
Sbjct: 695 DDDEDDDEDEDNESEGSSSSSS 716
Score = 38.9 bits (89), Expect = 0.005
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 20 KQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN 79
++ D + SSE +++ + E + D DD DD++D+D+ S S+
Sbjct: 657 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 716
Query: 80 DSDDVDDTDDS 90
S D D+D +
Sbjct: 717 SSGDSSDSDSN 727
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 47.4 bits (111), Expect = 1e-05
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 46 TLPSKSNESHDHMDDMDDEDDDDHV----------DSQDSIDSNDSDDVDDTDDSHQSDE 95
TL SKS D +D DDED+D+ D DS +S+ D+ +D D++ + DE
Sbjct: 633 TLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDE 692
Query: 96 SHHSDESDE 104
DE D+
Sbjct: 693 DEDDDEDDD 701
Score = 46.2 bits (108), Expect = 3e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 32 NAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSH 91
N SS T K E+ + D +D ++EDD++ S+D DS++S D+++D
Sbjct: 626 NPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGD 685
Query: 92 QSDESHHSDESDE 104
+++E ++ DE
Sbjct: 686 ENEEDDEDEDDDE 698
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 28 EEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDT 87
E+ +N SSE+ D + + +S + ++ +D +DEDDD+ +D +D D+
Sbjct: 658 EDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDE----------DDDEDEDNE 707
Query: 88 DDSHQSDESHHSDESD 103
+ S S D SD
Sbjct: 708 SEGSSSSSSSSGDSSD 723
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 23 DSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSD 82
D EE+++ + + + D + S +ES D D ++EDD+D D +D + D++
Sbjct: 650 DEDEDEEEEDDENGDSSEDGGDSSESSSEDESED--GDENEEDDEDEDDDEDDDEDEDNE 707
Query: 83 DVDDTDDSHQSDESHHSDES 102
+ S S +S SD +
Sbjct: 708 SEGSSSSSSSSGDSSDSDSN 727
Score = 38.9 bits (89), Expect = 0.005
Identities = 18/82 (21%), Positives = 35/82 (42%)
Query: 20 KQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN 79
K + + + ++ EE D + E + +E+ D +D D + D + D N
Sbjct: 628 KSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDEN 687
Query: 80 DSDDVDDTDDSHQSDESHHSDE 101
+ DD D+ DD ++ + E
Sbjct: 688 EEDDEDEDDDEDDDEDEDNESE 709
Score = 38.9 bits (89), Expect = 0.005
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 21 QADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND 80
Q+ S S E+ + E+ ++ +++ S+E + ED+ + D + D ++
Sbjct: 635 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDE 694
Query: 81 SDDVDDTDDSHQSDESHHSDES 102
DD DD +D E S S
Sbjct: 695 DDDEDDDEDEDNESEGSSSSSS 716
Score = 38.9 bits (89), Expect = 0.005
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 20 KQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN 79
++ D + SSE +++ + E + D DD DD++D+D+ S S+
Sbjct: 657 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 716
Query: 80 DSDDVDDTDDS 90
S D D+D +
Sbjct: 717 SSGDSSDSDSN 727
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 47.4 bits (111), Expect = 1e-05
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 46 TLPSKSNESHDHMDDMDDEDDDDHV----------DSQDSIDSNDSDDVDDTDDSHQSDE 95
TL SKS D +D DDED+D+ D DS +S+ D+ +D D++ + DE
Sbjct: 670 TLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDE 729
Query: 96 SHHSDESDE 104
DE D+
Sbjct: 730 DEDDDEDDD 738
Score = 46.2 bits (108), Expect = 3e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 32 NAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSH 91
N SS T K E+ + D +D ++EDD++ S+D DS++S D+++D
Sbjct: 663 NPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGD 722
Query: 92 QSDESHHSDESDE 104
+++E ++ DE
Sbjct: 723 ENEEDDEDEDDDE 735
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 28 EEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDT 87
E+ +N SSE+ D + + +S + ++ +D +DEDDD+ +D +D D+
Sbjct: 695 EDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDE----------DDDEDEDNE 744
Query: 88 DDSHQSDESHHSDESD 103
+ S S D SD
Sbjct: 745 SEGSSSSSSSSGDSSD 760
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 23 DSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSD 82
D EE+++ + + + D + S +ES D D ++EDD+D D +D + D++
Sbjct: 687 DEDEDEEEEDDENGDSSEDGGDSSESSSEDESED--GDENEEDDEDEDDDEDDDEDEDNE 744
Query: 83 DVDDTDDSHQSDESHHSDES 102
+ S S +S SD +
Sbjct: 745 SEGSSSSSSSSGDSSDSDSN 764
Score = 38.9 bits (89), Expect = 0.005
Identities = 18/82 (21%), Positives = 35/82 (42%)
Query: 20 KQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN 79
K + + + ++ EE D + E + +E+ D +D D + D + D N
Sbjct: 665 KSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDEN 724
Query: 80 DSDDVDDTDDSHQSDESHHSDE 101
+ DD D+ DD ++ + E
Sbjct: 725 EEDDEDEDDDEDDDEDEDNESE 746
Score = 38.9 bits (89), Expect = 0.005
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 21 QADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND 80
Q+ S S E+ + E+ ++ +++ S+E + ED+ + D + D ++
Sbjct: 672 QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDE 731
Query: 81 SDDVDDTDDSHQSDESHHSDES 102
DD DD +D E S S
Sbjct: 732 DDDEDDDEDEDNESEGSSSSSS 753
Score = 38.9 bits (89), Expect = 0.005
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 20 KQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN 79
++ D + SSE +++ + E + D DD DD++D+D+ S S+
Sbjct: 694 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 753
Query: 80 DSDDVDDTDDS 90
S D D+D +
Sbjct: 754 SSGDSSDSDSN 764
>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
[Homo sapiens]
Length = 666
Score = 45.8 bits (107), Expect = 4e-05
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 15/222 (6%)
Query: 20 KQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSN 79
K+ SE++ + S N ++ S+++E DH +D D D D H S+ D
Sbjct: 59 KELFGDDSEDEGASHHSGSDNHSERSDNRSEASERSDH-EDNDPSDVDQHSGSEAPNDDE 117
Query: 80 DSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYD---GRGDSV 136
D D H E SD+ + + + + + D + G +
Sbjct: 118 DEGHRSDGGSHHSEAEGSEKAHSDD--EKWGREDKSDQSDDEKIQNSDDEERAQGSDEDK 175
Query: 137 VYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKD 196
+ K D + P +D++ E E+ N + PVA D +D + + D
Sbjct: 176 LQNSDDDEKMQNTDDEERPQLSDDERQQLSEEEKANSDDER-PVASD----NDDEKQNSD 230
Query: 197 SYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQE 238
E QL D+ +S + + +A+DE + HSD + Q+
Sbjct: 231 DEEQPQLSDEEKMQNSDDE----RPQASDEEHRHSDDEEEQD 268
Score = 35.8 bits (81), Expect = 0.045
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 26 SSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDD 83
S +E+Q +S EE + P S+E H H DD E++ DH +S +DS+D
Sbjct: 229 SDDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDD---EEEQDH--KSESARGSDSED 281
Score = 32.7 bits (73), Expect = 0.38
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 26 SSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDED-----DDDHVDSQDSIDSND 80
S +E+Q E+ N + + S ++ D + DDE+ D++ + + D
Sbjct: 197 SDDERQQLSEEEKANSDDERPVAS---DNDDEKQNSDDEEQPQLSDEEKMQNSDDERPQA 253
Query: 81 SDDV-----DDTDDSHQSDESHHSDESDELV 106
SD+ D+ + H+S+ + SD DE++
Sbjct: 254 SDEEHRHSDDEEEQDHKSESARGSDSEDEVL 284
Score = 29.3 bits (64), Expect = 4.2
Identities = 43/217 (19%), Positives = 75/217 (34%), Gaps = 32/217 (14%)
Query: 58 MDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATE 117
M+D+ D D + +DS +DSD + S + SD+ + + P++ E
Sbjct: 4 MEDLFGSDADSEAERKDSDSGSDSDSDQENAASGSNASGSESDQDERGDSGQPSN---KE 60
Query: 118 VFTPVVPTVDTYDGRGDSVVYGL-----RSKSKKFRRPDIQYPDATDEDITSHMESEELN 172
+F D + G S G RS ++ + D D+ H SE
Sbjct: 61 LFG------DDSEDEGASHHSGSDNHSERSDNRSEASERSDHEDNDPSDVDQHSGSE--- 111
Query: 173 GAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKR--KANDESNEH 230
AP+D + G S S + +H + R K++ +E
Sbjct: 112 -------------APNDDEDEGHRSDGGSHHSEAEGSEKAHSDDEKWGREDKSDQSDDEK 158
Query: 231 SDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSKEE 267
D +E ++ S E E M D + + +
Sbjct: 159 IQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQ 195
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 44.7 bits (104), Expect = 1e-04
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 21 QADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSI---- 76
+ DSG E+++ ++S E+ + ++E + E D DD DD D+ ++ D ++
Sbjct: 1028 ELDSGGEEDEKESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEAS 1087
Query: 77 --DSNDSDDVDDTDDSHQSDESHHSDESDE 104
D DSD+ + E+ S ES E
Sbjct: 1088 EKDEGDSDEEETVSIVTSKAEATSSSESSE 1117
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 25 GSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDV 84
G+ + ++ SE++N+ ++E +E D DD DDE DD +S + +S+
Sbjct: 593 GTDSDIPSSKDSEDSNEDEEE-----DDEEEDEEDDEDDESDDSQSESDSNSESDTEGSE 647
Query: 85 DDTDDSHQSDESHHSDESDE 104
++ DD DES E ++
Sbjct: 648 EEDDDDKDQDESDSDTEGEK 667
Score = 34.3 bits (77), Expect = 0.13
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 26 SSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDV- 84
+ E+ +N + K + K+ ES + D D S + I S+DSDD+
Sbjct: 213 NQEQSKNQPLDARVDKIKDKKPRKKAMESSSNSDSDSGTSSDT---SSEGISSSDSDDLE 269
Query: 85 DDTDDSHQSDESHHSDESD 103
+D ++ QS E D+SD
Sbjct: 270 EDEEEEDQSIEESEDDDSD 288
Score = 33.1 bits (74), Expect = 0.29
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 27 SEEKQNAVSSEETNDFKQE--TLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDV 84
S+ K+ AVS+ N K + + P+KS D D D DS + + +D ++
Sbjct: 561 SQGKEKAVSNN-VNPVKTQHHSHPAKSLVEQFRGTDSDIPSSKDSEDSNEDEEEDDEEED 619
Query: 85 DDTDDSHQSDESHHSDESD 103
++ D+ +SD+S +S+
Sbjct: 620 EEDDEDDESDDSQSESDSN 638
Score = 33.1 bits (74), Expect = 0.29
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 48 PSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVD----DTDDSHQSDESHHSDESD 103
P + D DD+DDDD D D D ++ D D TD DE + +
Sbjct: 1286 PGRKRRRKGGDSDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDEDEGDQAASVE 1345
Query: 104 EL 105
EL
Sbjct: 1346 EL 1347
Score = 32.3 bits (72), Expect = 0.49
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDD--EDDDDHVDSQDSIDSN 79
+D SS++ +++ EE +D +++ + +ES D + D E D + + +D D +
Sbjct: 596 SDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKD 655
Query: 80 DSDDVDDTDDSHQS 93
+ DT+ S
Sbjct: 656 QDESDSDTEGEKTS 669
Score = 30.4 bits (67), Expect = 1.9
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 30 KQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDD 89
++ A+ S +D T S+E D DD ++D+ + Q +S D D +++
Sbjct: 235 RKKAMESSSNSDSDSGTSSDTSSEGISSSDS-DDLEEDEEEEDQSIEESEDDDSDSESEA 293
Query: 90 SHQSD 94
H+S+
Sbjct: 294 QHKSN 298
Score = 30.4 bits (67), Expect = 1.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 63 DEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTD 112
D D DS+DS + + DD ++ ++ + DES S + ++ T+
Sbjct: 595 DSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTE 644
Score = 29.6 bits (65), Expect = 3.2
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 20 KQADSGSSEEKQNAVSSE-ETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDS 78
K SG K N S+ + D + + + K M+ + D D S S +
Sbjct: 201 KSTSSGGGNRKCNQEQSKNQPLDARVDKIKDKKPRKKA-MESSSNSDSDSGTSSDTSSEG 259
Query: 79 NDSDDVDD-TDDSHQSDESHHSDESDE 104
S D DD +D + D+S E D+
Sbjct: 260 ISSSDSDDLEEDEEEEDQSIEESEDDD 286
Score = 28.1 bits (61), Expect = 9.3
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 22 ADSG-SSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND 80
+DSG SS+ +SS +++D +++ + DD D E + H + +
Sbjct: 247 SDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESEDDDSDSESEAQHKSNNQVLLHGI 306
Query: 81 SDDVDD 86
SD D
Sbjct: 307 SDPKAD 312
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 43.9 bits (102), Expect = 2e-04
Identities = 51/278 (18%), Positives = 109/278 (39%), Gaps = 25/278 (8%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND- 80
+DS E +++ S ET D + + +E D E+++ +S +
Sbjct: 157 SDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEEL 216
Query: 81 -----SDDVDDTDDSHQSDESHHSDESDELVTDFPTDLP----ATEVFTPVVPTVDTYDG 131
SD + HQ+ +S + + ++D ++ P A++ +P D
Sbjct: 217 PKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRISDS 276
Query: 132 RGDSVVYGLRSKSKKFRRPDIQYPDATDE----DITSHMESEELNGAYKAIPVAQDLNAP 187
+ S S+ P + D+ E S E+E+ + +K P + D
Sbjct: 277 ESEDPPRNQASDSENEELPKPRVSDSESEGPQKGPASDSETEDAS-RHKQKPESDD---D 332
Query: 188 SDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFH 247
SD +++G+D +++ + S + SH + + ++E +DS E K E
Sbjct: 333 SDRENKGED----TEMQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEE-- 386
Query: 248 SHEFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSE 285
+ + ++ D + +E+ K R+ + D + S+
Sbjct: 387 -EKVAKRKAAVLSDSEDEEKASAKKSRVVSDADDSDSD 423
Score = 37.4 bits (85), Expect = 0.015
Identities = 50/229 (21%), Positives = 85/229 (37%), Gaps = 25/229 (10%)
Query: 62 DDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQ-----SDESHHSDESDELVTDFPTDLPAT 116
D DD QD DS SD DD ++ H S E H +E+ + P T
Sbjct: 9 DQSDDGGATPVQDERDSG-SDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKGHHVT 67
Query: 117 EVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSH---MESEELNG 173
+ ++ D + + S S+ R + D+ +ED+ H ESEE
Sbjct: 68 DSENDEPLNLNASDSESEELHRQKDSDSESEERAEPPASDSENEDVNQHGSDSESEET-- 125
Query: 174 AYKAIPVAQDLN--------APSDWDSRGKDSYETSQLDD--QSAETHSHKQSRLYKRKA 223
+ +P + N + S+ + GK S++++ +S + S + L + +
Sbjct: 126 --RKLPGSDSENEELLNGHASDSENEDVGKHPASDSEIEELQKSPASDSETEDALKPQIS 183
Query: 224 NDESNE--HSDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSKEEDKH 270
+ ES E DS+ E V D +S+E +H
Sbjct: 184 DSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRH 232
Score = 35.4 bits (80), Expect = 0.058
Identities = 56/287 (19%), Positives = 103/287 (35%), Gaps = 46/287 (16%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHM---DDMDDEDDDDHVDS---QDS 75
+DS S ++ S ET D + +S++ D +D + ++D H DS +
Sbjct: 300 SDSESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFHSDSHMDRKK 359
Query: 76 IDSNDSDDVDDTDDSHQSDESHHSDESDE-------LVTDFPTDLPATEVFTPVVPTVDT 128
S+DS++ + SDE E ++ +++D + A+ + VV D
Sbjct: 360 FHSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDEEKASAKKSRVVSDADD 419
Query: 129 YDGRGDSVVYGLRSKS----------KKFRRPDIQYPDATDEDITSHMESEELNGAYKAI 178
D S G R K+ K+ + D D S E E L
Sbjct: 420 SDSDAVSDKSGKREKTIASDSEEEAGKELSDKKNEEKDLFGSDSESGNEEENL------- 472
Query: 179 PVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQE 238
+A D + + L+++ ET K++ N + +H D + E
Sbjct: 473 -IADIFGESGDEEEEEFTGFNQEDLEEEKGETQV-KEAEDSDSDDNIKRGKHMDFLSDFE 530
Query: 239 LSKVSREFHSHEFHSHED--------------MLVVDPKSKEEDKHL 271
+ ++ S + + D M+V ++ EED+ L
Sbjct: 531 MMLQRKKSMSGKRRRNRDGGTFISDADDVVSAMIVKMNEAAEEDRQL 577
Score = 29.6 bits (65), Expect = 3.2
Identities = 48/264 (18%), Positives = 102/264 (38%), Gaps = 29/264 (10%)
Query: 21 QADSGSSEEKQNA--VSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDS 78
Q+D G + Q+ S+ +D ++ S + H ++ + +D DS
Sbjct: 10 QSDDGGATPVQDERDSGSDGEDDVNEQHSGSDTGSVERHSENETSDREDGLPKGHHVTDS 69
Query: 79 NDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVY 138
+ + ++ +S+E H +SD ++ + PA++ D +
Sbjct: 70 ENDEPLNLNASDSESEELHRQKDSDS-ESEERAEPPASD------------SENEDVNQH 116
Query: 139 GLRSKSKKFRRPDIQYPDATDEDI----TSHMESEELNGAYKAIPVAQDLNAPSDWDSRG 194
G S+S++ R+ + D+ +E++ S E+E++ + ++L DS
Sbjct: 117 GSDSESEETRK--LPGSDSENEELLNGHASDSENEDVGKHPASDSEIEELQKSPASDSET 174
Query: 195 KDSYETSQLDDQSAETHSHKQSRLYK------RKANDESNE--HSDVIDSQELSKVSREF 246
+D+ + D +S E H+ S R ++ ES E V DS+ +
Sbjct: 175 EDALKPQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPRHQA 234
Query: 247 HSHEFHSHEDMLVVDPKSKEEDKH 270
E + D +S++ +H
Sbjct: 235 SDSENEELPKPRISDSESEDPPRH 258
>gi|119395727 cardiac calsequestrin 2 precursor [Homo sapiens]
Length = 399
Score = 43.1 bits (100), Expect = 3e-04
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 17 IPVKQADSGSSE--EKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQD 74
+ V ADS E + + ++EE D+ ++ L K N DD +D+DDDD+ D +D
Sbjct: 334 VNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKINTE----DDDEDDDDDDNSDEED 389
Query: 75 SIDSNDSDD 83
+ DS+D DD
Sbjct: 390 NDDSDDDDD 398
Score = 30.4 bits (67), Expect = 1.9
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 61 MDDEDDDDHVDSQD-----------SIDSNDSDDVDDTDDSHQSDESHHSDESDE 104
M+ DDDD +++ I++ D D+ DD DD+ +++ SD+ D+
Sbjct: 344 MEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDD 398
Score = 30.4 bits (67), Expect = 1.9
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 60 DMDDEDD-------DDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDE 104
++ D+DD +D ++ S N DD +D DD SDE + D D+
Sbjct: 345 EIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDD 396
Score = 28.5 bits (62), Expect = 7.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 58 MDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTD 112
M+ DD+D + +D I+ S ++ DD D+ +SDE D +D D
Sbjct: 344 MEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDEDDDDDDNSDEEDNDDSDDDDD 398
>gi|239752832 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 42.4 bits (98), Expect = 5e-04
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
+D+G+ E ++ N + +P +E DD DD+D D+ + + ID D
Sbjct: 220 SDAGADELEEVIKDDIWPNPLQYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGDE 279
Query: 82 DDVDDTDDSHQSDESHHSDESDE 104
D+ ++ +D + +E + D+
Sbjct: 280 DEGEEDEDDDEGEEGEEDEGEDD 302
>gi|239747380 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 42.4 bits (98), Expect = 5e-04
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
+D+G+ E ++ N + +P +E DD DD+D D+ + + ID D
Sbjct: 220 SDAGADELEEVIKDDIWPNPLQYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGDE 279
Query: 82 DDVDDTDDSHQSDESHHSDESDE 104
D+ ++ +D + +E + D+
Sbjct: 280 DEGEEDEDDDEGEEGEEDEGEDD 302
>gi|239741205 PREDICTED: similar to SET translocation [Homo sapiens]
Length = 302
Score = 42.4 bits (98), Expect = 5e-04
Identities = 19/83 (22%), Positives = 39/83 (46%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
+D+G+ E ++ N + +P +E DD DD+D D+ + + ID D
Sbjct: 220 SDAGADELEEVIKDDIWPNPLQYYLVPDMDDEEGGEDDDDDDDDGDEGEEELEDIDEGDE 279
Query: 82 DDVDDTDDSHQSDESHHSDESDE 104
D+ ++ +D + +E + D+
Sbjct: 280 DEGEEDEDDDEGEEGEEDEGEDD 302
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 41.6 bits (96), Expect = 8e-04
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 37 EETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSND----------SDDVDD 86
E+ +D PS ++ H+ DD DD+DDDD D SI+ +D D
Sbjct: 225 EDVSDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDV 284
Query: 87 TDDSHQSDESHHSDESDE 104
+D H D SH +E
Sbjct: 285 SDGHHHRDPSHRHRSHEE 302
Score = 34.7 bits (78), Expect = 0.099
Identities = 48/271 (17%), Positives = 89/271 (32%), Gaps = 42/271 (15%)
Query: 22 ADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDS 81
A+ G SE+T D + S+ SH H D +DED+ + I +
Sbjct: 125 AEHGGQARGHRGHGSEDTEDSAEHRHHLPSHRSHSHQD--EDEDEVVSSEHHHHILRHGH 182
Query: 82 DDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRG----DSVV 137
D DD + +E +E E T + G G + V
Sbjct: 183 RGHDGEDDEGEEEEEEEEEEE--------------EASTEYGHQAHRHRGHGSEEDEDVS 228
Query: 138 YGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDS 197
G R + D D+D + ++++ Y+ +
Sbjct: 229 DGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYR--------------HQAHRHQ 274
Query: 198 YETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDM 257
+ D+ ++ H H+ R ++ N+ DV ++ + H H+ H E++
Sbjct: 275 GHGIEEDEDVSDGHHHRDPSHRHRSHEEDDNDDDDV-----STEYGHQAHRHQDHRKEEV 329
Query: 258 LVVDPKSKE---EDKHLKFRISHELDSASSE 285
V + + +H R E + S+E
Sbjct: 330 EAVSGEHHHHVPDHRHQGHRDEEEDEDVSTE 360
Score = 32.3 bits (72), Expect = 0.49
Identities = 21/106 (19%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 19 VKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVD-SQDSID 77
+++ DS +EK+ S E +D E ++ +D +DE++ + +Q+ +
Sbjct: 477 LRKDDSEEEKEKEEDPGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEEGHGLSLNQEEEE 536
Query: 78 SNDSDDVDDTDDSHQSDE---------SHHSDESDELVTDFPTDLP 114
D ++ ++ +D + +E HS+E +E D P
Sbjct: 537 EEDKEEEEEEEDEERREERAEVGAPLSPDHSEEEEEEEEGLEEDEP 582
Score = 28.9 bits (63), Expect = 5.4
Identities = 19/94 (20%), Positives = 36/94 (38%), Gaps = 8/94 (8%)
Query: 19 VKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDD---DHVDSQDS 75
++ G E EE + ++E +++H H +ED+D H S
Sbjct: 178 LRHGHRGHDGEDDEGEEEEEEEEEEEEASTEYGHQAHRHRGHGSEEDEDVSDGHHHHGPS 237
Query: 76 IDSNDSDDVDDTDDSHQSDESHHSDESDELVTDF 109
++ DD DD D D+ D++ ++
Sbjct: 238 HRHQGHEEDDDDDDDDDDD-----DDDDDVSIEY 266
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 41.2 bits (95), Expect = 0.001
Identities = 44/247 (17%), Positives = 87/247 (35%), Gaps = 11/247 (4%)
Query: 14 TCAIPVKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQ 73
TCA G E EE + ++E + E + + E D D SQ
Sbjct: 1329 TCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQ 1388
Query: 74 D------SIDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVD 127
+ S + DS +DD ++ + DE +E + + + + + EV +P
Sbjct: 1389 EKEEPEISTEKEDSARLDDHEEEEEEDEEPSHNEDHDADDEDDSHMESAEVEKEELPRES 1448
Query: 128 TYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAP 187
+ + + + P++ D + + E +EL G +A+P + + P
Sbjct: 1449 FKEVLENQETFLDLNVQPGHSNPEVLMDCGVDLTASCNSEPKELAGDPEAVPESDEEPPP 1508
Query: 188 SD----WDSRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVI-DSQELSKV 242
+ D + +T + A ++ + ES+E D D E +
Sbjct: 1509 GEQAQKQDQKNSKEVDTEFKEGNPATMEIDSETVQAVQSLTQESSEQDDTFQDCAETQEA 1568
Query: 243 SREFHSH 249
R ++
Sbjct: 1569 CRSLQNY 1575
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 40.8 bits (94), Expect = 0.001
Identities = 48/232 (20%), Positives = 91/232 (39%), Gaps = 26/232 (11%)
Query: 23 DSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSD 82
D+ + +K + SE++ D K+++ K N DD+ D D+ +S D+ D
Sbjct: 287 DTKKNAKKSSDAESEDSKDAKKDSKKVKKNVK------KDDKKKDVKKDT-ESTDAESGD 339
Query: 83 DVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRS 142
D+ D+ + + D+ + +P + D D R DS S
Sbjct: 340 SKDERKDTKKDKKKLKKDDKKKDTKKYPESTD--------TESGDAKDARNDSRNLKKAS 391
Query: 143 KSKKFRRPDIQYPDATDEDITSHMESEELNGAYKA---------IPVAQDLNAPSDWDSR 193
K+ ++ + +TD + S +ES+E K ++ +D DS
Sbjct: 392 KNDDKKKDAKKITFSTDSE--SELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSE 449
Query: 194 GKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSRE 245
K + + D++ + S K + K N ES E ++ ++ K S+E
Sbjct: 450 PKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKE 501
Score = 36.2 bits (82), Expect = 0.034
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 24/216 (11%)
Query: 19 VKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDM--DDEDDDDHVDSQDSI 76
+K+ D +K + E+ D K S++ + DD D + DS+ +
Sbjct: 354 LKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESEL 413
Query: 77 DSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSV 136
+S +S + D ++ S ++DE TD ++ P D+ G+ D
Sbjct: 414 ESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSE-----------PKGDSKKGKKD-- 460
Query: 137 VYGLRSKSKKFRRPDIQYPDATDEDITSHMESE-ELNGAYKAIPVAQDLNAPSDWDSRGK 195
K KK + D + DA ++ MES+ EL K + D+R K
Sbjct: 461 ----EKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKEKKGSKKDIKKDAR-K 515
Query: 196 DSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHS 231
D+ T D+S++T +++ K +D +E S
Sbjct: 516 DTESTDAEFDESSKTGFKTSTKI---KGSDTESEES 548
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 40.8 bits (94), Expect = 0.001
Identities = 43/229 (18%), Positives = 88/229 (38%), Gaps = 24/229 (10%)
Query: 30 KQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDD 89
+ NA+ E D K + E D D + D D H+ + +++ D+ DD
Sbjct: 4723 EDNAIEMSEDFDGKMHDGELEEQEEDDEKSDSEGGDLDKHMGDLNGEEADKLDERLWGDD 4782
Query: 90 SHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRR 149
+ DE ++++E T E + +V D D + + KS++ ++
Sbjct: 4783 DEEEDEEEEDNKTEE------TGPGMDEEDSELVAKDDNLDSGNSN-----KDKSQQDKK 4831
Query: 150 PDIQYPDATD----EDITSHM---------ESEELNGAYKAIPVAQDLNAPSDWDSRGKD 196
+ + +A D ED + E + +G + +P + L+ P D + +D
Sbjct: 4832 EEKEEAEADDGGQGEDKINEQIDERDYDENEVDPYHGNQEKVPEPEALDLPDDLNLDSED 4891
Query: 197 SYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSRE 245
D++ E + + + +A E+ E + Q S+ +E
Sbjct: 4892 KNGGEDTDNEEGEEENPLEIKEKPEEAGHEAEERGETETDQNESQSPQE 4940
Score = 39.3 bits (90), Expect = 0.004
Identities = 52/258 (20%), Positives = 100/258 (38%), Gaps = 30/258 (11%)
Query: 28 EEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDT 87
+EK E + ET NES + + +DD + ++ +D+ DD
Sbjct: 4912 KEKPEEAGHEAEERGETET---DQNESQSPQEPEEGPSEDDKAEGEEEMDTG----ADDQ 4964
Query: 88 DDSHQSDESHHSDESDELVTDFPTDL--------PATEVFTPVVPTVDTYDGRGDSVVYG 139
D HS+E + V + + PA + F P + R DS
Sbjct: 4965 DGDAAQHPEEHSEEQQQSVEEKDKEADEEGGENGPADQGFQP-----QEEEEREDSDTE- 5018
Query: 140 LRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYE 199
+ R + T + + ++ EL GA ++ + D+ + +E
Sbjct: 5019 -EQVPEALERKEHASCGQTGVENMQNTQAMELAGAAPEKEQGKEEHGSGAADANQAEGHE 5077
Query: 200 TSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSH-EDML 258
++ + +++ H+ K ++ +KRK NE S + D E +V + + + SH E
Sbjct: 5078 SNFIAQLASQKHTRKNTQSFKRKPGQADNERS-MGDHNE--RVHKRLRTVDTDSHAEQGP 5134
Query: 259 VVDPKSKEED----KHLK 272
P+++ ED +H+K
Sbjct: 5135 AQQPQAQVEDADAFEHIK 5152
Score = 32.3 bits (72), Expect = 0.49
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Query: 23 DSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSD 82
D G E+K N E D + E P N+ + D DD ++DS+D D+D
Sbjct: 4841 DGGQGEDKINEQIDERDYD-ENEVDPYHGNQEKVPEPEALDLPDDLNLDSEDKNGGEDTD 4899
Query: 83 DVDDTDDS------HQSDESHHSDESDELVTD 108
+ + +++ + H ++E E TD
Sbjct: 4900 NEEGEEENPLEIKEKPEEAGHEAEERGETETD 4931
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 40.4 bits (93), Expect = 0.002
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 15/104 (14%)
Query: 25 GSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDSID------S 78
G + Q E N F S N+ + E+D++H QD D
Sbjct: 67 GGQNDSQQGQLEENNNRFISVDEDSSGNQE-------EQEEDEEHAGEQDEEDEEEEEMD 119
Query: 79 NDSDDVDDTDDSHQSDESHHSDE--SDELVTDFPTDLPATEVFT 120
+SDD D +DDS + DE H++ + + D P ++ +T
Sbjct: 120 QESDDFDQSDDSSREDEHTHTNSVTNSSSIVDLPVHQLSSPFYT 163
>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
Length = 709
Score = 40.4 bits (93), Expect = 0.002
Identities = 55/275 (20%), Positives = 110/275 (40%), Gaps = 37/275 (13%)
Query: 41 DFKQETLPSKSNESHDHMDDMDDEDDDDHVD---SQDSIDSNDSDDVDDTDDSHQSDESH 97
+ K L N S+D D D++ D +++ + I +++D D D ++DES
Sbjct: 424 NIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSD-DSGEETDESF 482
Query: 98 HSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQY--- 154
+ E +E V + D A+ + D + + + +K +K R+ ++
Sbjct: 483 NPGEEEEDVAE-EFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEVKKG 541
Query: 155 --PDATDEDITSHM-----ESEELNGAYKAIPVAQDLNAPS-------------DWDSRG 194
P+A ++++M E++ + I + DL+ + +WD +
Sbjct: 542 KDPNAPKRPMSAYMLWLNASREKIKSDHPGISIT-DLSKKAGEIWKGMSKEKKEEWDRKA 600
Query: 195 KDS---YETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSK-----VSREF 246
+D+ YE + + + S K+ + K+K E SK +S F
Sbjct: 601 EDARRDYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLSESF 660
Query: 247 HSHEFHSHEDMLVVDPKSKEEDKHLKFRISHELDS 281
S EF S ++ + KSK++ + + EL S
Sbjct: 661 KSKEFVSSDESSSGENKSKKKRRRSEDSEEEELAS 695
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 53 ESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESD 103
E D DD DDEDDDD D ++ + + DD DDT+D +D+ + D D
Sbjct: 135 EEDDKEDDDDDEDDDDEEDEEEE-EEEEEDDDDDTEDF--ADQENLPDPQD 182
Score = 35.0 bits (79), Expect = 0.076
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 9 CLLGITCAIPVKQADSGSSEEKQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDD 68
C++ + I D G ++K++ E+ +D + E E + ++ DD+D +D
Sbjct: 118 CIVNVCLEIMEPGGDGGEEDDKEDDDDDEDDDDEEDE-------EEEEEEEEDDDDDTED 170
Query: 69 HVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLP 114
D ++ D D HQS S +++ +D P D P
Sbjct: 171 FADQENLPDPQDI-------SCHQS-PSKTDHLTEKAYSDTPRDFP 208
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.124 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,272,931
Number of Sequences: 37866
Number of extensions: 539309
Number of successful extensions: 6946
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 3345
Number of HSP's gapped (non-prelim): 1932
length of query: 287
length of database: 18,247,518
effective HSP length: 101
effective length of query: 186
effective length of database: 14,423,052
effective search space: 2682687672
effective search space used: 2682687672
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.