Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 89886221
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89886221 hypothetical protein LOC643923 [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89886221 hypothetical protein LOC643923 [Homo sapiens] 271 8e-74
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 31 0.22
gi|239755624 PREDICTED: hypothetical protein XP_002344645 [Homo ... 29 1.1
gi|19526475 outer dense fiber of sperm tails 3 [Homo sapiens] 29 1.1
gi|61563742 hect domain and RLD 6 [Homo sapiens] 28 1.5
gi|239753797 PREDICTED: hypothetical protein [Homo sapiens] 28 1.9
gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo ... 28 1.9
gi|28373122 contactin 4 isoform a precursor [Homo sapiens] 28 1.9
gi|239756985 PREDICTED: hypothetical protein XP_002345137 [Homo ... 27 3.2
gi|239751500 PREDICTED: hypothetical protein XP_002347885 [Homo ... 27 3.2
gi|239746001 PREDICTED: hypothetical protein XP_002344190 [Homo ... 27 3.2
gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ... 27 3.2
gi|13787217 FAT tumor suppressor 2 precursor [Homo sapiens] 27 3.2
gi|38348368 hypothetical protein LOC374872 [Homo sapiens] 27 4.2
gi|31542779 tripartite motif family-like 1 [Homo sapiens] 27 4.2
gi|239757803 PREDICTED: hypothetical protein [Homo sapiens] 27 5.5
gi|239752315 PREDICTED: hypothetical protein XP_002348197 [Homo ... 27 5.5
gi|239746822 PREDICTED: hypothetical protein XP_002343851 [Homo ... 27 5.5
gi|13569840 MACRO domain containing 1 [Homo sapiens] 27 5.5
gi|27370565 aquaporin 11 [Homo sapiens] 27 5.5
gi|31742505 Rho family guanine-nucleotide exchange factor [Homo ... 27 5.5
gi|90017700 hypothetical protein LOC644809 [Homo sapiens] 27 5.5
gi|239749365 PREDICTED: hypothetical protein XP_002347014 [Homo ... 26 7.2
gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate... 26 7.2
gi|27886667 potassium voltage-gated channel, subfamily H, member... 26 7.2
gi|148596944 C2 calcium-dependent domain containing 3 [Homo sapi... 26 7.2
gi|31542255 hypothetical protein LOC140706 [Homo sapiens] 26 7.2
gi|22749539 hypothetical protein LOC257169 [Homo sapiens] 26 7.2
gi|27894328 interleukin 1 receptor-like 1 isoform 2 precursor [H... 26 9.4
gi|27894324 interleukin 1 receptor-like 1 isoform 1 precursor [H... 26 9.4
>gi|89886221 hypothetical protein LOC643923 [Homo sapiens]
Length = 127
Score = 271 bits (694), Expect = 8e-74
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MEGGTRAAWLGRGAGLGPWEPLALWASVSREELGSRAAGPPDCGVLRAASWEERSAGLLS 60
MEGGTRAAWLGRGAGLGPWEPLALWASVSREELGSRAAGPPDCGVLRAASWEERSAGLLS
Sbjct: 1 MEGGTRAAWLGRGAGLGPWEPLALWASVSREELGSRAAGPPDCGVLRAASWEERSAGLLS 60
Query: 61 CASSNCWETPHFNIGASLSRAGKYAANPQWAVDWYYQLSLSFGETNFGQASRHCSASLQC 120
CASSNCWETPHFNIGASLSRAGKYAANPQWAVDWYYQLSLSFGETNFGQASRHCSASLQC
Sbjct: 61 CASSNCWETPHFNIGASLSRAGKYAANPQWAVDWYYQLSLSFGETNFGQASRHCSASLQC 120
Query: 121 IRFVPVA 127
IRFVPVA
Sbjct: 121 IRFVPVA 127
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 31.2 bits (69), Expect = 0.22
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 14/111 (12%)
Query: 21 PLALWASVSREELGSRAAGPPDCG-VLRAASWEERSAGLLSCASSNCWETPHFNIGASLS 79
P A WAS S S A+ P D G +ASW S+ + S W +P + +S +
Sbjct: 127 PSAFWASPS----ASGASTPSDSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSA 182
Query: 80 RAGKYAANPQWAVDWYYQLSLS---------FGETNFGQASRHCSASLQCI 121
++ WA + +S S FG + S S+S CI
Sbjct: 183 SGASTPSDSGWASPSVFWVSPSTSWASSPSDFGWASTPSDSGWASSSASCI 233
Score = 29.6 bits (65), Expect = 0.65
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 25 WASVSREELGSRAAGPPDCGVLRAASWEERSAGLLSCASSNCWETPHFNIGASLSRAGKY 84
WAS S S A+ P D G W SA +S S + W +P + ++ S +G
Sbjct: 326 WASFS----ASGASAPSDSG------WTSHSASGVSTTSDSGWASPSASGASTSSDSGWA 375
Query: 85 AANPQWA 91
+ + WA
Sbjct: 376 SPSASWA 382
Score = 27.3 bits (59), Expect = 3.2
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 14/98 (14%)
Query: 7 AAWLGRGAGLGPWEPLALWASVSREE-----LGSRAAGPPDCG---------VLRAASWE 52
A+W + G P A WAS + S A+ P D G + +A W
Sbjct: 73 ASWASIPSDSGWASPSASWASTPSDSGWASPSASGASIPSDSGWASPSVSGASIPSAFWA 132
Query: 53 ERSAGLLSCASSNCWETPHFNIGASLSRAGKYAANPQW 90
SA S S + W +P + ++ S +G + + W
Sbjct: 133 SPSASGASTPSDSGWASPSASWASTSSDSGWASPSASW 170
>gi|239755624 PREDICTED: hypothetical protein XP_002344645 [Homo
sapiens]
Length = 427
Score = 28.9 bits (63), Expect = 1.1
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 12 RGAGLGPWEPLALWASVSREELGSRAAGPPDCGVLRAASWEERSA 56
RGAG G PLA +SR G+ +AGP G +R + E RSA
Sbjct: 2 RGAGCGAC-PLAAAGRMSRTS-GAGSAGPVPWGAMRQVAPENRSA 44
>gi|19526475 outer dense fiber of sperm tails 3 [Homo sapiens]
Length = 254
Score = 28.9 bits (63), Expect = 1.1
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 5 TRAAWLGRGAGLGPWEPL-ALWASVSREELGSRAAGPPDCGV-------LRAASWEERSA 56
T W+G P P+ AL++S G + PP G LRA ++ R A
Sbjct: 2 TEEVWMGTWRPHRPRGPIMALYSSP-----GPKYLIPPTTGFMKHTPTKLRAPAYSFRGA 56
Query: 57 GLLSCASSNCWETPHFNIGASLSRAGKYAANPQWAVDWYYQ 97
+L + NC P +N+ + R GK P +++ YQ
Sbjct: 57 PML--LAENCSPGPRYNVNPKILRTGK-DLGPAYSILGRYQ 94
>gi|61563742 hect domain and RLD 6 [Homo sapiens]
Length = 1022
Score = 28.5 bits (62), Expect = 1.5
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 25 WASVSREELGSRAAGPPDCGVLRAASWEERSAGLLS 60
W + SRE R AG P +L+AAS E S LL+
Sbjct: 5 WGADSRELQRRRTAGSPGAELLQAASGERHSLLLLT 40
>gi|239753797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 864
Score = 28.1 bits (61), Expect = 1.9
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 11 GRGAGLGPWEPLALWASVSREELGSRAAGPPD--CGVLRAASWEERSAGLLSCASSNCWE 68
G G GLGP E + E G+ + PD G L A + ++A + +S +
Sbjct: 415 GNGPGLGPQEEPPAPLTSQPERAGAGGSHGPDQLTGNLLCAPGQVQAAAMAPTSSQETYS 474
Query: 69 TPHFNIGASLSR 80
P GA SR
Sbjct: 475 VPWGRAGAGGSR 486
>gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo
sapiens]
Length = 894
Score = 28.1 bits (61), Expect = 1.9
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 11 GRGAGLGPWEPLALWASVSREELGSRAAGPPD--CGVLRAASWEERSAGLLSCASSNCWE 68
G G GLGP E + E G+ + PD G L A + ++A + +S +
Sbjct: 415 GNGPGLGPQEEPPAPLTSQPERAGAGGSHGPDQLTGNLLCAPGQVQAAAMAPTSSQETYS 474
Query: 69 TPHFNIGASLSR 80
P GA SR
Sbjct: 475 VPWGRAGAGGSR 486
>gi|28373122 contactin 4 isoform a precursor [Homo sapiens]
Length = 1026
Score = 28.1 bits (61), Expect = 1.9
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 16 LGPWEPLALWASVSREELGSRAAGPPDCGVLRAASWEERSAGLLSCASSNCWETPHFNIG 75
LG P +W + + +A G+L ++++ AGL C + N + G
Sbjct: 250 LGNPVPTIIWRRADGKPIARKARRHKSNGILEIPNFQQEDAGLYECVAEN-------SRG 302
Query: 76 ASLSRAG-KYAANPQW 90
+++R + A P W
Sbjct: 303 KNVARGQLTFYAQPNW 318
>gi|239756985 PREDICTED: hypothetical protein XP_002345137 [Homo
sapiens]
Length = 253
Score = 27.3 bits (59), Expect = 3.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 11 GRGAGLGPWEPLALWASVSREELGSRAAGPPDCGVLRAASWEERSA 56
G GA P P A W S S L S + PD V+ +W+++ A
Sbjct: 89 GTGAPARPCAPAASWGSASWSGLDSES--DPDSVVMVDFTWDQQGA 132
>gi|239751500 PREDICTED: hypothetical protein XP_002347885 [Homo
sapiens]
Length = 253
Score = 27.3 bits (59), Expect = 3.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 11 GRGAGLGPWEPLALWASVSREELGSRAAGPPDCGVLRAASWEERSA 56
G GA P P A W S S L S + PD V+ +W+++ A
Sbjct: 89 GTGAPARPCAPAASWGSASWSGLDSES--DPDSVVMVDFTWDQQGA 132
>gi|239746001 PREDICTED: hypothetical protein XP_002344190 [Homo
sapiens]
Length = 253
Score = 27.3 bits (59), Expect = 3.2
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 11 GRGAGLGPWEPLALWASVSREELGSRAAGPPDCGVLRAASWEERSA 56
G GA P P A W S S L S + PD V+ +W+++ A
Sbjct: 89 GTGAPARPCAPAASWGSASWSGLDSES--DPDSVVMVDFTWDQQGA 132
>gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo
sapiens]
Length = 756
Score = 27.3 bits (59), Expect = 3.2
Identities = 26/67 (38%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 3 GGTRAAWLGRGAGLGPWEPLALWASV-SREELGSRAAGPPDCGVLRAAS--WEERS-AGL 58
GG AWL GLG W P A V +R S A CG RA S W S A
Sbjct: 654 GGGAGAWLRGRLGLG-WGPTACVPVVAARRPDTSSARSGACCGCSRANSQYWRASSRAAA 712
Query: 59 LSCASSN 65
+C S N
Sbjct: 713 TACNSQN 719
>gi|13787217 FAT tumor suppressor 2 precursor [Homo sapiens]
Length = 4349
Score = 27.3 bits (59), Expect = 3.2
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 16/61 (26%)
Query: 45 VLRAASWEERSAGLLSCASSNCWETPHFNIGA-------------SLSRAGKYAANPQWA 91
+L A+ E+ G+LS S+ W H + A S + G Y A PQWA
Sbjct: 12 LLHCATCEKPLEGILS---SSAWHFTHSHYNATIYENSSPKTYVESFEKMGIYLAEPQWA 68
Query: 92 V 92
V
Sbjct: 69 V 69
>gi|38348368 hypothetical protein LOC374872 [Homo sapiens]
Length = 473
Score = 26.9 bits (58), Expect = 4.2
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Query: 11 GRGAGLGPW-EPLALWASVSRE----ELGSRAAG 39
GRGA LGPW L W V R L RAAG
Sbjct: 408 GRGAPLGPWLRALGPWLRVRRGLLVLRLAERAAG 441
>gi|31542779 tripartite motif family-like 1 [Homo sapiens]
Length = 468
Score = 26.9 bits (58), Expect = 4.2
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Query: 43 CGVLRAASWEERSAGLLSCASSNCWET---PHFNIGASLSRAGKYA 85
C V SWEE + LSC CW T PHF L R A
Sbjct: 36 CLVCLLRSWEEHNTP-LSC--PECWRTLEGPHFQSNERLGRLASIA 78
>gi|239757803 PREDICTED: hypothetical protein [Homo sapiens]
Length = 367
Score = 26.6 bits (57), Expect = 5.5
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 4 GTRAAWLGRG----AGLGPWEPLAL----WASVSREELGSRAAGPPDCGVLRAASWEERS 55
GT AWLG G A P +P L W S L + A P D +LR W+
Sbjct: 277 GTSTAWLGEGPVALAQQLPPKPQVLPTQRWGVPSLGILPQQLAAPAD--ILRPKLWKRWC 334
Query: 56 AGLLSCASSNC 66
A + A S C
Sbjct: 335 AVRVVPAGSGC 345
>gi|239752315 PREDICTED: hypothetical protein XP_002348197 [Homo
sapiens]
Length = 367
Score = 26.6 bits (57), Expect = 5.5
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 4 GTRAAWLGRG----AGLGPWEPLAL----WASVSREELGSRAAGPPDCGVLRAASWEERS 55
GT AWLG G A P +P L W S L + A P D +LR W+
Sbjct: 277 GTSTAWLGEGPVALAQQLPPKPQVLPTQRWGVPSLGILPQQLAAPAD--ILRPKLWKRWC 334
Query: 56 AGLLSCASSNC 66
A + A S C
Sbjct: 335 AVRVVPAGSGC 345
>gi|239746822 PREDICTED: hypothetical protein XP_002343851 [Homo
sapiens]
Length = 371
Score = 26.6 bits (57), Expect = 5.5
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 4 GTRAAWLGRG----AGLGPWEPLAL----WASVSREELGSRAAGPPDCGVLRAASWEERS 55
GT AWLG G A P +P L W S L + A P D +LR W+
Sbjct: 281 GTSTAWLGEGPVALAQQLPPKPQVLPTQRWGVPSLGILPQQLAAPAD--ILRPKLWKRWC 338
Query: 56 AGLLSCASSNC 66
A + A S C
Sbjct: 339 AVRVVPAGSGC 349
>gi|13569840 MACRO domain containing 1 [Homo sapiens]
Length = 325
Score = 26.6 bits (57), Expect = 5.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 3 GGTRAAWLGRGAGLGPWEPLALWASV 28
G AA +GR AG+ W PLA+ A V
Sbjct: 62 GAWGAAAVGRTAGVRTWAPLAMAAKV 87
>gi|27370565 aquaporin 11 [Homo sapiens]
Length = 271
Score = 26.6 bits (57), Expect = 5.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 83 KYAANPQWAVDWYYQLSLSFGETNFGQASRHCSASLQ 119
++ A+P W + Y SL G T G +S C +Q
Sbjct: 70 QHPAHPTWTLTLVYFFSLVHGLTLVGTSSNPCGVMMQ 106
>gi|31742505 Rho family guanine-nucleotide exchange factor [Homo
sapiens]
Length = 1114
Score = 26.6 bits (57), Expect = 5.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 11 GRGAGLGPWEPLALWASVSREELGSRAAGPPDC 43
G GAG GPW A+ S+E+ S G C
Sbjct: 975 GSGAGSGPWIKNMERATTSKEDPASSTGGIKGC 1007
>gi|90017700 hypothetical protein LOC644809 [Homo sapiens]
Length = 161
Score = 26.6 bits (57), Expect = 5.5
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 8 AWLGRGAGLGPWEPLALWASVSREELGSR---AAGPPDCGVLRAASWEE 53
AW G W P A V R L R AAG P CG + EE
Sbjct: 29 AWRRLVPNFGAWAPRKGAARVGRPVLSPRTSGAAGEPTCGAGSPGTLEE 77
>gi|239749365 PREDICTED: hypothetical protein XP_002347014 [Homo
sapiens]
Length = 190
Score = 26.2 bits (56), Expect = 7.2
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 13/62 (20%)
Query: 7 AAWLGRGAGLGPWE--------PLALWASVSREELG-----SRAAGPPDCGVLRAASWEE 53
A WLGRG G GP + WA G R AG G RA S
Sbjct: 22 ATWLGRGGGAGPGQSGPGHGQGTATSWARTGESGAGPSPAWRRCAGEASRGRQRARSGPP 81
Query: 54 RS 55
+S
Sbjct: 82 KS 83
>gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate
3B [Homo sapiens]
Length = 1043
Score = 26.2 bits (56), Expect = 7.2
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 15/54 (27%)
Query: 6 RAAWLGRGAGLGPWEPLALWASVSREELGSRAAGPPDCGVLRAASWEERSAGLL 59
RA WLG LGP GS P CGVL R LL
Sbjct: 5 RALWLGLALALGP---------------GSAGGHPQPCGVLARLGGSVRLGALL 43
>gi|27886667 potassium voltage-gated channel, subfamily H, member 8
[Homo sapiens]
Length = 1107
Score = 26.2 bits (56), Expect = 7.2
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Query: 29 SREELGSRAA--GPPDCGVLRAASWEERSAGLLSC-ASSNCWETPHFNIGASLSRAGKYA 85
SRE L +R + C L+ A L S +S+ W ++G+S R G +
Sbjct: 918 SRESLQTRTSWSAHQPCLHLQTGGAAYTQAQLCSSNITSDIWSVDPSSVGSSPQRTGAHE 977
Query: 86 ANPQWAVDWYYQLSLSFGETNFGQASRHCSASLQCI 121
NP + + Y+ SL + +++ L+CI
Sbjct: 978 QNPADS-ELYHSPSLDYSPSHYQVVQEGHLQFLRCI 1012
>gi|148596944 C2 calcium-dependent domain containing 3 [Homo
sapiens]
Length = 1963
Score = 26.2 bits (56), Expect = 7.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 36 RAAGPPDCGVLRAASWEERSAGLLSC 61
+ A PP C ++R W E S G L C
Sbjct: 51 KIAKPPTCVLVRVRWWGETSDGTLFC 76
>gi|31542255 hypothetical protein LOC140706 [Homo sapiens]
Length = 433
Score = 26.2 bits (56), Expect = 7.2
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 10/55 (18%)
Query: 3 GGTRAAWLGRGAGLGPWEPLALWASVSREELGSRAAGPPDCGVLRAASWEERSAG 57
GG A G G G S+ R+ G+RA+G + + SWE R G
Sbjct: 209 GGAAEARAGGGGG----------GSLERQRAGARASGSWERRQTFSGSWERRHGG 253
>gi|22749539 hypothetical protein LOC257169 [Homo sapiens]
Length = 461
Score = 26.2 bits (56), Expect = 7.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 49 ASWEERSAGLLSCASSNCWET 69
+ W+E + GL C CW T
Sbjct: 7 SQWDETTCGLAVCQHPQCWAT 27
>gi|27894328 interleukin 1 receptor-like 1 isoform 2 precursor [Homo
sapiens]
Length = 328
Score = 25.8 bits (55), Expect = 9.4
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Query: 63 SSNCWETPHFNIGASLSRAGKYAANPQWAVDWYYQLSLSFGETNFGQASRHCSASLQCIR 122
S W + + R GK P + VDWYY + T Q AS Q ++
Sbjct: 21 SKQSWGLENEALIVRCPRQGK----PSYTVDWYYSQTNKSIPT---QERNRVFASGQLLK 73
Query: 123 FVPVA 127
F+P A
Sbjct: 74 FLPAA 78
>gi|27894324 interleukin 1 receptor-like 1 isoform 1 precursor [Homo
sapiens]
Length = 556
Score = 25.8 bits (55), Expect = 9.4
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Query: 63 SSNCWETPHFNIGASLSRAGKYAANPQWAVDWYYQLSLSFGETNFGQASRHCSASLQCIR 122
S W + + R GK P + VDWYY + T Q AS Q ++
Sbjct: 21 SKQSWGLENEALIVRCPRQGK----PSYTVDWYYSQTNKSIPT---QERNRVFASGQLLK 73
Query: 123 FVPVA 127
F+P A
Sbjct: 74 FLPAA 78
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,711,801
Number of Sequences: 37866
Number of extensions: 243550
Number of successful extensions: 686
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 664
Number of HSP's gapped (non-prelim): 44
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.