Search of human proteins with 89274169

Search of human proteins with 89274169

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|89274169 cytokine induced apoptosis inhibitor 1 [Homo
sapiens]
         (312 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|89274169 cytokine induced apoptosis inhibitor 1 [Homo sapiens]     618   e-177
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]       34   0.19 
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]        34   0.19 
gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]       34   0.19 
gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]        34   0.19 
gi|54792782 C-type lectin domain family 16, member A [Homo sapiens]    33   0.42 
gi|239582759 Acr formation associated factor isoform 2 [Homo sap...    32   0.55 
gi|66529203 hypothetical protein LOC57714 [Homo sapiens]               32   0.55 
gi|164663805 methyltransferase like 7B [Homo sapiens]                  32   0.95 
gi|4501915 ADAM metallopeptidase domain 9 isoform 1 precursor [H...    31   1.6  
gi|87299628 biorientation of chromosomes in cell division 1-like...    31   1.6  
gi|89145417 methyltransferase like 7A [Homo sapiens]                   31   1.6  
gi|18780285 mucosal vascular addressin cell adhesion molecule 1 ...    30   2.1  
gi|21361348 UTP14, U3 small nucleolar ribonucleoprotein, homolog...    30   2.1  
gi|62241003 cardiomyopathy associated 5 [Homo sapiens]                 30   2.1  
gi|189163495 ataxin 3 isoform 4 [Homo sapiens]                         30   2.8  
gi|22748823 Bardet-Biedl syndrome 5 [Homo sapiens]                     30   2.8  
gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]              30   2.8  
gi|221136814 coiled-coil domain containing 154 [Homo sapiens]          29   4.7  
gi|30023820 hypothetical protein LOC162427 [Homo sapiens]              29   6.1  
gi|134142826 pericentriolar material 1 [Homo sapiens]                  29   6.1  
gi|194239731 eukaryotic translation elongation factor 1 delta is...    29   6.1  
gi|194239727 eukaryotic translation elongation factor 1 delta is...    29   6.1  
gi|194239725 eukaryotic translation elongation factor 1 delta is...    29   6.1  
gi|194239723 eukaryotic translation elongation factor 1 delta is...    29   6.1  
gi|25453472 eukaryotic translation elongation factor 1 delta iso...    29   6.1  
gi|25453474 eukaryotic translation elongation factor 1 delta iso...    29   6.1  
gi|194239729 eukaryotic translation elongation factor 1 delta is...    29   6.1  
gi|110735439 Werner syndrome protein [Homo sapiens]                    28   8.0  
gi|169218196 PREDICTED: similar to Werner syndrome ATP-dependent...    28   8.0  

>gi|89274169 cytokine induced apoptosis inhibitor 1 [Homo sapiens]
          Length = 312

 Score =  618 bits (1593), Expect = e-177
 Identities = 312/312 (100%), Positives = 312/312 (100%)

Query: 1   MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF 60
           MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF
Sbjct: 1   MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF 60

Query: 61  DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT 120
           DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT
Sbjct: 61  DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT 120

Query: 121 LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK 180
           LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK
Sbjct: 121 LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK 180

Query: 181 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG 240
           KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG
Sbjct: 181 KSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEG 240

Query: 241 KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGE 300
           KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGE
Sbjct: 241 KKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLGMPAFKPGE 300

Query: 301 KVLLSDSNLHDA 312
           KVLLSDSNLHDA
Sbjct: 301 KVLLSDSNLHDA 312


>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
          Length = 1863

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 16/237 (6%)

Query: 43   SVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETA 102
            SV   K+ L + +  SS + + +  V  S  L +A+        L+P G     +P ET 
Sbjct: 983  SVLGGKKKLPAENGSSSAETLNAKAVESSKPLSNAQPSGP----LKPVGNA---KPAETL 1035

Query: 103  --VDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 160
              + N    +T   + +A     L    + + +     +V   R H G  +DN    +  
Sbjct: 1036 KPMGNAKPAETLKPMGNAKPDENLKSASKEELKKDVKNDVNCKRGHAG-TTDNEKRSESQ 1094

Query: 161  GKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLD 220
            G  P F+    + + ++  KK     + + DP A  +WTL+   ++     ++  +  L 
Sbjct: 1095 GTAPAFKQ-KLQDVHVAEGKKLLLQCQVSSDPPATIIWTLNGKTLKTTKFIILSQEGSLC 1153

Query: 221  PEDLKKPDPASLRAASCGEGKKRKACKNCTCGL----AEELEKEKSREQMSSQPKSA 273
               ++K  P       C   K       C+C +    A   E  K+ E  S +PKS+
Sbjct: 1154 SVSIEKALPEDRGLYKC-VAKNDAGQAECSCQVTVDDAPASENTKAPEMKSRRPKSS 1209


>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
          Length = 1914

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 16/237 (6%)

Query: 43   SVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETA 102
            SV   K+ L + +  SS + + +  V  S  L +A+        L+P G     +P ET 
Sbjct: 983  SVLGGKKKLPAENGSSSAETLNAKAVESSKPLSNAQPSGP----LKPVGNA---KPAETL 1035

Query: 103  --VDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 160
              + N    +T   + +A     L    + + +     +V   R H G  +DN    +  
Sbjct: 1036 KPMGNAKPAETLKPMGNAKPDENLKSASKEELKKDVKNDVNCKRGHAG-TTDNEKRSESQ 1094

Query: 161  GKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLD 220
            G  P F+    + + ++  KK     + + DP A  +WTL+   ++     ++  +  L 
Sbjct: 1095 GTAPAFKQ-KLQDVHVAEGKKLLLQCQVSSDPPATIIWTLNGKTLKTTKFIILSQEGSLC 1153

Query: 221  PEDLKKPDPASLRAASCGEGKKRKACKNCTCGL----AEELEKEKSREQMSSQPKSA 273
               ++K  P       C   K       C+C +    A   E  K+ E  S +PKS+
Sbjct: 1154 SVSIEKALPEDRGLYKC-VAKNDAGQAECSCQVTVDDAPASENTKAPEMKSRRPKSS 1209


>gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]
          Length = 1794

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 16/237 (6%)

Query: 43   SVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETA 102
            SV   K+ L + +  SS + + +  V  S  L +A+        L+P G     +P ET 
Sbjct: 914  SVLGGKKKLPAENGSSSAETLNAKAVESSKPLSNAQPSGP----LKPVGNA---KPAETL 966

Query: 103  --VDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 160
              + N    +T   + +A     L    + + +     +V   R H G  +DN    +  
Sbjct: 967  KPMGNAKPAETLKPMGNAKPDENLKSASKEELKKDVKNDVNCKRGHAG-TTDNEKRSESQ 1025

Query: 161  GKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLD 220
            G  P F+    + + ++  KK     + + DP A  +WTL+   ++     ++  +  L 
Sbjct: 1026 GTAPAFKQ-KLQDVHVAEGKKLLLQCQVSSDPPATIIWTLNGKTLKTTKFIILSQEGSLC 1084

Query: 221  PEDLKKPDPASLRAASCGEGKKRKACKNCTCGL----AEELEKEKSREQMSSQPKSA 273
               ++K  P       C   K       C+C +    A   E  K+ E  S +PKS+
Sbjct: 1085 SVSIEKALPEDRGLYKC-VAKNDAGQAECSCQVTVDDAPASENTKAPEMKSRRPKSS 1140


>gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]
          Length = 1845

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 16/237 (6%)

Query: 43   SVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETA 102
            SV   K+ L + +  SS + + +  V  S  L +A+        L+P G     +P ET 
Sbjct: 914  SVLGGKKKLPAENGSSSAETLNAKAVESSKPLSNAQPSGP----LKPVGNA---KPAETL 966

Query: 103  --VDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQIT 160
              + N    +T   + +A     L    + + +     +V   R H G  +DN    +  
Sbjct: 967  KPMGNAKPAETLKPMGNAKPDENLKSASKEELKKDVKNDVNCKRGHAG-TTDNEKRSESQ 1025

Query: 161  GKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLD 220
            G  P F+    + + ++  KK     + + DP A  +WTL+   ++     ++  +  L 
Sbjct: 1026 GTAPAFKQ-KLQDVHVAEGKKLLLQCQVSSDPPATIIWTLNGKTLKTTKFIILSQEGSLC 1084

Query: 221  PEDLKKPDPASLRAASCGEGKKRKACKNCTCGL----AEELEKEKSREQMSSQPKSA 273
               ++K  P       C   K       C+C +    A   E  K+ E  S +PKS+
Sbjct: 1085 SVSIEKALPEDRGLYKC-VAKNDAGQAECSCQVTVDDAPASENTKAPEMKSRRPKSS 1140


>gi|54792782 C-type lectin domain family 16, member A [Homo sapiens]
          Length = 1053

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 11/113 (9%)

Query: 149  HESDNLLFVQIT--GKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDME 206
            H  D L+ V  T    KP+  V  S  ++   T   SPS+ PA  P  + L   +A+ + 
Sbjct: 947  HLPDQLVIVNETEADSKPSKNVARSAAVE---TASLSPSLVPARQPTISLLCEDTADTLS 1003

Query: 207  DDSMDLIDSDELLDPEDLKK---PDPASLRAASCGEGKKRKACKNCTCGLAEE 256
             +S+ L+     +DP  L+      P S  AA+C E    +A      G AE+
Sbjct: 1004 VESLTLVPP---VDPHSLRSLTGMPPLSTPAAACTEPVGEEAACAEPVGTAED 1053


>gi|239582759 Acr formation associated factor isoform 2 [Homo
           sapiens]
          Length = 265

 Score = 32.3 bits (72), Expect = 0.55
 Identities = 28/129 (21%), Positives = 57/129 (44%), Gaps = 4/129 (3%)

Query: 93  LFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESD 152
           LF+  P   ++ +++   T   L + L L+  V  +E + E  TP    +  ++  +  D
Sbjct: 5   LFIFIPGVFSLKSSTLKPTIEALPNVLPLNEDVNKQEEKNEDHTPNYAPANEKNGNYYKD 64

Query: 153 NLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDL 212
              +V  T + PN   G+  ++ +  T   + ++K    P     WT+ A  +   ++ +
Sbjct: 65  IKQYV-FTTQNPN---GTESEISVRATTDLNFALKNGSTPNVPAFWTMLAKAINGTAVVM 120

Query: 213 IDSDELLDP 221
            D D+L  P
Sbjct: 121 DDKDQLFHP 129


>gi|66529203 hypothetical protein LOC57714 [Homo sapiens]
          Length = 1063

 Score = 32.3 bits (72), Expect = 0.55
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 6/122 (4%)

Query: 124 LVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK-KS 182
           L E K    EP T  E+Q+  +  G  +   + V    +  N   G+ +++K    + K 
Sbjct: 243 LPESKGGSSEPGT--ELQTTEQQAGASAS--MAVDAVAEPANAVKGAGKEMKEKTQRMKQ 298

Query: 183 SPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKK 242
            P+  P       +  T + ++M   + + +  +E  +PEDLKKP+  +  AA+    K+
Sbjct: 299 PPATTPPFKTHCQEAETKTKDEMAA-AEEKVGKNEQGEPEDLKKPEGKNRSAAAVKNEKE 357

Query: 243 RK 244
           +K
Sbjct: 358 QK 359


>gi|164663805 methyltransferase like 7B [Homo sapiens]
          Length = 244

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 6/55 (10%)

Query: 45  ENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 99
           E+++QL      + S D+++  LV  S      ++L E+ R+LRPGG LF  E V
Sbjct: 128 EDMRQLA-----DGSMDVVVCTLVLCSVQ-SPRKVLQEVRRVLRPGGVLFFWEHV 176


>gi|4501915 ADAM metallopeptidase domain 9 isoform 1 precursor [Homo
           sapiens]
          Length = 819

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 223 DLKKPDPASLRAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDA 282
           ++ KPD A   A SCG  K   A + C CG  +E E +   E  + + KS    C  GD 
Sbjct: 404 NIPKPDEA-YSAPSCGN-KLVDAGEECDCGTPKECELDPCCEGSTCKLKS-FAECAYGDC 460

Query: 283 FRCASCPYL 291
             C  C +L
Sbjct: 461 --CKDCRFL 467


>gi|87299628 biorientation of chromosomes in cell division 1-like
            [Homo sapiens]
          Length = 3051

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 22/160 (13%)

Query: 127  VKELQREPLTPEEVQSVR-------EHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSIT 179
            + ELQREPL   E  +V        E +  ES N   +  +G+K N E  S   ++    
Sbjct: 2701 IAELQREPLLVNESLNVENSGFRTNEEIHSESYNKGEIS-SGRKDNAEAISGHSVEAD-- 2757

Query: 180  KKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSD--------ELLDPEDLKKPDPAS 231
             K     +  +     K   LS+ D  DD+ D++DS            +P D K+ +   
Sbjct: 2758 PKEVEEEERHMPKRKRKQHYLSSEDEPDDNPDVLDSRIETAQRQCPETEPHDTKEENSRD 2817

Query: 232  LRAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQPK 271
            L        K      + T  + EE ++  S E    +P+
Sbjct: 2818 LEELP----KTSSETNSTTSRVMEEKDEYSSSETTGEKPE 2853


>gi|89145417 methyltransferase like 7A [Homo sapiens]
          Length = 244

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 57  ESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 99
           + S D+++  LV  S   +   IL E+ R+LRPGG  +  E V
Sbjct: 135 DGSVDVVVCTLVLCSVK-NQERILREVCRVLRPGGAFYFMEHV 176


>gi|18780285 mucosal vascular addressin cell adhesion molecule 1
           isoform b precursor [Homo sapiens]
          Length = 295

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 15/83 (18%)

Query: 126 EVKELQREPLTPEEVQ-SVREH-----LGHESDNLLFVQITGKKPNFEVGSSRQLKLSIT 179
           EV+E + EP   E+V   V E      LG      L+ Q T + P  E+           
Sbjct: 167 EVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLELSH--------- 217

Query: 180 KKSSPSVKPAVDPAAAKLWTLSA 202
           +++ P+ KPA D   A LWT SA
Sbjct: 218 RQAIPASKPAGDQLPAALWTSSA 240


>gi|21361348 UTP14, U3 small nucleolar ribonucleoprotein, homolog A
           [Homo sapiens]
          Length = 771

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 11/166 (6%)

Query: 109 VKTASKLCSALTLSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEV 168
           VKT+S L +       V+ K+    PL  EE++ +   +          Q+  K     V
Sbjct: 94  VKTSSSLATVKKQLSRVKSKKTVELPLNKEEIERIHREVAFNKT----AQVLSKWDPV-V 148

Query: 169 GSSRQLKLSI--TKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKK 226
             +RQ +  +   +K  P++ P     +   W  +   +E +  +L+  ++    + L  
Sbjct: 149 LKNRQAEQLVFPLEKEEPAIAPIEHVLSG--WK-ARTPLEQEIFNLLHKNKQPVTDPLLT 205

Query: 227 P-DPASLRAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQPK 271
           P + ASLRA S  E K R+A       L    E +  RE+     K
Sbjct: 206 PVEKASLRAMSLEEAKMRRAELQRARALQSYYEAKARREKKIKSKK 251


>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
          Length = 4069

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 6/92 (6%)

Query: 126 EVKELQREPLTPEEVQSVREH--LGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSS 183
           E++E + EP+ P  V+++ EH  L  E +     +     P     S   L  S T+K+S
Sbjct: 607 ELQEQEGEPVPPSNVEAIAEHAVLSEEENE----EFEAYSPAAAPTSESSLSPSTTEKTS 662

Query: 184 PSVKPAVDPAAAKLWTLSANDMEDDSMDLIDS 215
            +  P       +   LS ++  +      DS
Sbjct: 663 ENQSPLFSTVTPEYMVLSGDEASESGCYTPDS 694


>gi|189163495 ataxin 3 isoform 4 [Homo sapiens]
          Length = 295

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 30/135 (22%), Positives = 60/135 (44%), Gaps = 23/135 (17%)

Query: 20  SPVE--ALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSA 77
           SPVE  ++   +D+ + +   EG V+ E+ +  LQ  +        L+ L+ G   +   
Sbjct: 29  SPVELSSIAHQLDEEERMRMAEGGVTSEDYRTFLQWFN--------LNSLLTGPELISDT 80

Query: 78  EILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTP 137
            +   +A++ + G  +F+             VK     C A  L  ++ V+++ R  L  
Sbjct: 81  YLALFLAQLQQEGYSIFV-------------VKGDLPDCEADQLLQMIRVQQMHRPKLIG 127

Query: 138 EEVQSVREHLGHESD 152
           EE+  ++E   H++D
Sbjct: 128 EELAQLKEQRVHKTD 142


>gi|22748823 Bardet-Biedl syndrome 5 [Homo sapiens]
          Length = 341

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 10/153 (6%)

Query: 37  GNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAE--ILAEIARILRPGGCL- 93
           GN G   + N++ ++  A+   SF++ +  L   S  +  ++  +   I    + GG + 
Sbjct: 175 GNLGTFFITNVR-IVWHANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIESSQQSGGYVL 233

Query: 94  -FLKEPVETAVDNNSKVKTASKLCSALTLSGL---VEVKELQREPLTPEEVQSVRE--HL 147
            F  +PVE   ++  ++ +  K+ SA  + G+   +E K    E LT E++Q   E    
Sbjct: 234 GFKIDPVEKLQESVKEINSLHKVYSASPIFGVDYEMEEKPQPLEALTVEQIQDDVEIDSD 293

Query: 148 GHESDNLLFVQITGKKPNFEVGSSRQLKLSITK 180
           GH    + +     K+ + E   S +L L+I K
Sbjct: 294 GHTDAFVAYFADGNKQQDREPVFSEELGLAIEK 326


>gi|63252863 BTB (POZ) domain containing 12 [Homo sapiens]
          Length = 1834

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 44/196 (22%), Positives = 71/196 (36%), Gaps = 27/196 (13%)

Query: 89   PGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEV-KELQREPLTPEEVQSVREHL 147
            P  C FL  P +      S   + S L +  +  G  +V       P  P + +  R  L
Sbjct: 1030 PHPCRFLLGPPQGGSPRGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPSKQKRDRSIL 1089

Query: 148  GHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSS---PSVKPAVD--------PAAAK 196
                          K+P  + G  R+  L    K     P   P++D         ++  
Sbjct: 1090 -----------TLSKEPGHQKGKERRSVLECRNKGVLMFPEKSPSIDLTQSNPDHSSSRS 1138

Query: 197  LWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGLAEE 256
              + S  + ED+ + L+DSDE L+ E  K    +S       E KK       +C L   
Sbjct: 1139 QKSSSKLNEEDEVILLLDSDEELELEQTKMKSISS----DPLEEKKALEISPRSCELFSI 1194

Query: 257  LEKEKSREQMSSQPKS 272
            ++ +  +E   S P+S
Sbjct: 1195 IDVDADQEPSQSPPRS 1210


>gi|221136814 coiled-coil domain containing 154 [Homo sapiens]
          Length = 667

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 137 PEEVQSVREH-LGHESDNLLFVQITGKKPNFEVGSSRQ 173
           P++++SV +  L H+SD+ L +   GK   F+VG+ RQ
Sbjct: 468 PQQIESVSDKCLLHKSDSDLRISAEGKAREFKVGALRQ 505


>gi|30023820 hypothetical protein LOC162427 [Homo sapiens]
          Length = 466

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 173 QLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASL 232
           QL LS   +  PS  PA       L + S+ D++ D+    D  ELLD  +L + DPAS 
Sbjct: 407 QLALSGASQPGPSGAPAQRATRGFLRSPSS-DLDTDAEG--DDFELLDQSELSQLDPASS 463

Query: 233 RA 234
           R+
Sbjct: 464 RS 465


>gi|134142826 pericentriolar material 1 [Homo sapiens]
          Length = 2024

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 27/167 (16%)

Query: 122  SGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKK 181
            S  +  ++ + + L  EEV+S R    +E +  +      +KP  + G S    +S+ K 
Sbjct: 1186 SSSIGAEKPRNKKLPEEEVESSRTPWLYEQEGEV------EKPFIKTGFS----VSVEKS 1235

Query: 182  SSPSVKPAVDPAAAKLWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGK 241
            +S + K  +D    +         +++S++   S           PDP      +    K
Sbjct: 1236 TSSNRKNQLDTNGRR------RQFDEESLESFSS----------MPDPVDPTTVT-KTFK 1278

Query: 242  KRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASC 288
             RKA    +    ++  K KS+++ S+Q KS   N     A   ++C
Sbjct: 1279 TRKASAQASLASKDKTPKSKSKKRNSTQLKSRVKNIRYESASMSSTC 1325


>gi|194239731 eukaryotic translation elongation factor 1 delta
           isoform 2 [Homo sapiens]
          Length = 281

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)

Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
           S  + +L++ +KSSP           V P   V+P A K  T  A D EDD +DL  SD 
Sbjct: 106 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 164

Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
             + ED +       R     E K +K
Sbjct: 165 --EEEDKEAAQLREERLRQYAEKKAKK 189


>gi|194239727 eukaryotic translation elongation factor 1 delta
           isoform 2 [Homo sapiens]
          Length = 281

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)

Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
           S  + +L++ +KSSP           V P   V+P A K  T  A D EDD +DL  SD 
Sbjct: 106 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 164

Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
             + ED +       R     E K +K
Sbjct: 165 --EEEDKEAAQLREERLRQYAEKKAKK 189


>gi|194239725 eukaryotic translation elongation factor 1 delta
           isoform 3 [Homo sapiens]
          Length = 646

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)

Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
           S  + +L++ +KSSP           V P   V+P A K  T  A D EDD +DL  SD 
Sbjct: 471 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 529

Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
             + ED +       R     E K +K
Sbjct: 530 --EEEDKEAAQLREERLRQYAEKKAKK 554


>gi|194239723 eukaryotic translation elongation factor 1 delta
           isoform 1 [Homo sapiens]
          Length = 647

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)

Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
           S  + +L++ +KSSP           V P   V+P A K  T  A D EDD +DL  SD 
Sbjct: 472 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 530

Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
             + ED +       R     E K +K
Sbjct: 531 --EEEDKEAAQLREERLRQYAEKKAKK 555


>gi|25453472 eukaryotic translation elongation factor 1 delta
           isoform 2 [Homo sapiens]
          Length = 281

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)

Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
           S  + +L++ +KSSP           V P   V+P A K  T  A D EDD +DL  SD 
Sbjct: 106 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 164

Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
             + ED +       R     E K +K
Sbjct: 165 --EEEDKEAAQLREERLRQYAEKKAKK 189


>gi|25453474 eukaryotic translation elongation factor 1 delta
           isoform 1 [Homo sapiens]
          Length = 647

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)

Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
           S  + +L++ +KSSP           V P   V+P A K  T  A D EDD +DL  SD 
Sbjct: 472 SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 530

Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
             + ED +       R     E K +K
Sbjct: 531 --EEEDKEAAQLREERLRQYAEKKAKK 555


>gi|194239729 eukaryotic translation elongation factor 1 delta
           isoform 4 [Homo sapiens]
          Length = 257

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 15/87 (17%)

Query: 170 SSRQLKLSITKKSSPS----------VKPA--VDPAAAKLWTLSANDMEDDSMDLIDSDE 217
           S  + +L++ +KSSP           V P   V+P A K  T  A D EDD +DL  SD 
Sbjct: 82  SKLEARLNVLEKSSPGHRATAPQTQHVSPMRQVEPPAKKPAT-PAEDDEDDDIDLFGSDN 140

Query: 218 LLDPEDLKKPDPASLRAASCGEGKKRK 244
             + ED +       R     E K +K
Sbjct: 141 --EEEDKEAAQLREERLRQYAEKKAKK 165


>gi|110735439 Werner syndrome protein [Homo sapiens]
          Length = 1432

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 200 LSANDMEDDSMDLIDSDELLDPEDLKKPDP 229
           LS ND E+D+  +I+SDE L+ E LK   P
Sbjct: 425 LSPNDNENDTSYVIESDEDLEMEMLKHLSP 454



 Score = 28.5 bits (62), Expect = 8.0
 Identities = 20/63 (31%), Positives = 31/63 (49%)

Query: 200 LSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGLAEELEK 259
           LS ND E+D+  +I+SDE L+ E LK  +  +         K  K  +N      EE E 
Sbjct: 452 LSPNDNENDTSYVIESDEDLEMEMLKSLENLNSGTVEPTHSKCLKMERNLGLPTKEEEED 511

Query: 260 EKS 262
           +++
Sbjct: 512 DEN 514


>gi|169218196 PREDICTED: similar to Werner syndrome ATP-dependent
           helicase, partial [Homo sapiens]
          Length = 1140

 Score = 28.5 bits (62), Expect = 8.0
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 200 LSANDMEDDSMDLIDSDELLDPEDLKKPDP 229
           LS ND E+D+  +I+SDE L+ E LK   P
Sbjct: 133 LSPNDNENDTSYVIESDEDLEMEMLKHLSP 162



 Score = 28.5 bits (62), Expect = 8.0
 Identities = 20/63 (31%), Positives = 31/63 (49%)

Query: 200 LSANDMEDDSMDLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGLAEELEK 259
           LS ND E+D+  +I+SDE L+ E LK  +  +         K  K  +N      EE E 
Sbjct: 160 LSPNDNENDTSYVIESDEDLEMEMLKSLENLNSGTVEPTHSKCLKMERNLGLPTKEEEED 219

Query: 260 EKS 262
           +++
Sbjct: 220 DEN 222


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.130    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,426,338
Number of Sequences: 37866
Number of extensions: 549982
Number of successful extensions: 1579
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1565
Number of HSP's gapped (non-prelim): 50
length of query: 312
length of database: 18,247,518
effective HSP length: 102
effective length of query: 210
effective length of database: 14,385,186
effective search space: 3020889060
effective search space used: 3020889060
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.