Guide to the Human Genome
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Name: FAM134C Sequence: fasta or formatted (466aa) NCBI GI: 30023820
Description:

hypothetical protein LOC162427

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         43           2
 C cysteine            1.5          7           1
 D aspartate           6.9         32           2
 E glutamate           6.7         31           3
 F phenylalanine       3.9         18           2
 G glycine             6.4         30           1
 H histidine           1.9          9           2
 I isoleucine          2.6         12           2
 K lysine              1.7          8           2
 L leucine            13.3         62           3
 M methionine          2.6         12           2
 N asparagine          2.4         11           1
 P proline             7.5         35           2
 Q glutamine           3.9         18           2
 R arginine            7.1         33           3
 S serine              9.4         44           2
 T threonine           3.6         17           2
 V valine              5.8         27           1
 W tryptophan          2.1         10           1
 Y tyrosine            1.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC162427 
FAM134B               0.251   hypothetical protein LOC54463 isoform 1 
FAM134A               0.226   hypothetical protein LOC79137 
FAM134B               0.216   hypothetical protein LOC54463 isoform 2 
COL9A1                0.020   alpha 1 type IX collagen isoform 1 precursor 
COL9A1                0.020   alpha 1 type IX collagen isoform 2 precursor 
LHX3                  0.013   LIM homeobox protein 3 isoform a 
LHX3                  0.013   LIM homeobox protein 3 isoform b 
MAGEC1                0.012   melanoma antigen family C, 1 
AMPH                  0.011   amphiphysin isoform 1 
ZNF692                0.011   zinc finger protein 692 isoform 2 
ZNF692                0.011   zinc finger protein 692 isoform 1 
NACAD                 0.011   NAC alpha domain containing 
NACAD                 0.011   PREDICTED: NAC alpha domain containing 
NACAD                 0.011   PREDICTED: NAC alpha domain containing 
NACAD                 0.011   PREDICTED: NAC alpha domain containing 
NACAD                 0.011   PREDICTED: NAC alpha domain containing 
ANKRD11               0.011   ankyrin repeat domain 11 
CORT                  0.011   cortistatin preproprotein 
GPBP1L1               0.010   GC-rich promoter binding protein 1-like 1 
LCP2                  0.009   lymphocyte cytosolic protein 2 
LOC100293375          0.009   PREDICTED: hypothetical protein 
AMPH                  0.009   amphiphysin isoform 2 
NUP214                0.009   nucleoporin 214kDa 
SETD1A                0.009   SET domain containing 1A 
PYGO1                 0.009   pygopus homolog 1 
LOC65998              0.008   hypothetical protein LOC65998 
CASZ1                 0.008   castor homolog 1, zinc finger isoform a 
QRICH2                0.008   glutamine rich 2 
FAM84B                0.008   family with sequence similarity 84, member B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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