Guide to the Human Genome
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Name: C3orf26 Sequence: fasta or formatted (279aa) NCBI GI: 14150167
Description:

hypothetical protein LOC84319

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         10           1
 C cysteine            1.8          5           1
 D aspartate           5.0         14           2
 E glutamate           9.0         25           2
 F phenylalanine       2.9          8           1
 G glycine             6.1         17           2
 H histidine           1.4          4           1
 I isoleucine          4.3         12           2
 K lysine             12.2         34           3
 L leucine            12.9         36           2
 M methionine          2.9          8           2
 N asparagine          2.5          7           1
 P proline             5.4         15           1
 Q glutamine           3.6         10           2
 R arginine            5.7         16           2
 S serine              7.2         20           2
 T threonine           3.9         11           2
 V valine              6.8         19           2
 W tryptophan          1.8          5           2
 Y tyrosine            1.1          3           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC84319 
BAT1                  0.037   HLA-B associated transcript 1 
BAT1                  0.037   HLA-B associated transcript 1 
DDX39                 0.032   DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 
DDX1                  0.028   DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 
DDX3X                 0.019   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...
DDX3Y                 0.019   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...
DDX3Y                 0.019   DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...
DDX21                 0.017   DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 
DDX50                 0.015   nucleolar protein GU2 
MAP1B                 0.015   microtubule-associated protein 1B 
DDX17                 0.015   DEAD box polypeptide 17 isoform 3 
DDX17                 0.015   DEAD box polypeptide 17 isoform 1 
EIF4A1                0.015   eukaryotic translation initiation factor 4A isoform 1...
DDX20                 0.015   DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 
ETV5                  0.015   ets variant gene 5 (ets-related molecule) 
CNGB1                 0.013   cyclic nucleotide gated channel beta 1 isoform b [H...
CNGB1                 0.013   cyclic nucleotide gated channel beta 1 isoform a [H...
PLCB1                 0.013   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.013   phosphoinositide-specific phospholipase C beta 1 iso...
DDX5                  0.013   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
TTN                   0.013   titin isoform N2-A 
ANKRD1                0.013   cardiac ankyrin repeat protein 
HDGF2                 0.013   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.013   hepatoma-derived growth factor-related protein 2 iso...
ABCB4                 0.011   ATP-binding cassette, subfamily B, member 4 isoform B...
ABCB4                 0.011   ATP-binding cassette, subfamily B, member 4 isoform C...
ABCB4                 0.011   ATP-binding cassette, subfamily B, member 4 isoform A...
DDX6                  0.011   DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 
ESCO1                 0.011   establishment of cohesion 1 homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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