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Search of human proteins with 14149821
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14149821 hypothetical protein LOC84103 [Homo sapiens]
(359 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14149821 hypothetical protein LOC84103 [Homo sapiens] 742 0.0
gi|153251823 stromal protein associated with thymii and lymph no... 62 8e-10
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 40 0.003
gi|149944526 additional sex combs like 3 [Homo sapiens] 37 0.021
gi|56549696 E1A binding protein p400 [Homo sapiens] 36 0.047
gi|57222563 colonic and hepatic tumor over-expressed protein iso... 35 0.080
gi|57164942 colonic and hepatic tumor over-expressed protein iso... 35 0.080
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 35 0.10
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 35 0.10
gi|150170670 piccolo isoform 2 [Homo sapiens] 35 0.10
gi|150378539 piccolo isoform 1 [Homo sapiens] 35 0.10
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 34 0.23
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 34 0.23
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 34 0.23
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 34 0.23
gi|115334682 SNAP25-interacting protein [Homo sapiens] 34 0.23
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 33 0.30
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 33 0.40
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 33 0.40
gi|115511030 hypothetical protein LOC115004 [Homo sapiens] 33 0.40
gi|38788274 bromodomain PHD finger transcription factor isoform ... 33 0.52
gi|41281612 zinc finger protein 828 [Homo sapiens] 33 0.52
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 33 0.52
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 33 0.52
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 32 0.67
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 32 0.67
gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens] 32 0.67
gi|116284392 mucin 2 precursor [Homo sapiens] 32 0.88
gi|38202209 methyl-CpG binding domain protein 5 [Homo sapiens] 32 0.88
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 32 0.88
>gi|14149821 hypothetical protein LOC84103 [Homo sapiens]
Length = 359
Score = 742 bits (1916), Expect = 0.0
Identities = 359/359 (100%), Positives = 359/359 (100%)
Query: 1 MNLNPPTSALQIEGKGSHIMARNVSCFLVRHTPHPRRVCHIKGLNNIPICTVNDDENAFG 60
MNLNPPTSALQIEGKGSHIMARNVSCFLVRHTPHPRRVCHIKGLNNIPICTVNDDENAFG
Sbjct: 1 MNLNPPTSALQIEGKGSHIMARNVSCFLVRHTPHPRRVCHIKGLNNIPICTVNDDENAFG 60
Query: 61 TLWEVGQSNYLEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKE 120
TLWEVGQSNYLEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKE
Sbjct: 61 TLWEVGQSNYLEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKE 120
Query: 121 CFKTSSENPLVIKKEEIKAKRPPSPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQE 180
CFKTSSENPLVIKKEEIKAKRPPSPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQE
Sbjct: 121 CFKTSSENPLVIKKEEIKAKRPPSPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQE 180
Query: 181 IKILAKLCSILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPA 240
IKILAKLCSILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPA
Sbjct: 181 IKILAKLCSILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPA 240
Query: 241 AETGKPPTVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPP 300
AETGKPPTVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPP
Sbjct: 241 AETGKPPTVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPP 300
Query: 301 LLIRRNNMKIPVAEYFSKPNSPPRPNTQESGSAKPVSARSIQEYNLCPQRACYPSTHRR 359
LLIRRNNMKIPVAEYFSKPNSPPRPNTQESGSAKPVSARSIQEYNLCPQRACYPSTHRR
Sbjct: 301 LLIRRNNMKIPVAEYFSKPNSPPRPNTQESGSAKPVSARSIQEYNLCPQRACYPSTHRR 359
>gi|153251823 stromal protein associated with thymii and lymph nodes
[Homo sapiens]
Length = 351
Score = 62.0 bits (149), Expect = 8e-10
Identities = 77/304 (25%), Positives = 122/304 (40%), Gaps = 31/304 (10%)
Query: 5 PPTSALQIEGKGSHIMARNVSCFLVRHTPHPRRVCHIKGLNNIPICTVND-----DENAF 59
P T G+ SH F RH PHP+ V HI+ L P+C V D E+
Sbjct: 61 PQTPGTYCFGRLSH------HSFFSRHHPHPQHVTHIQDLTGKPVCVVRDFPAPLPESTV 114
Query: 60 GTLWEVGQSNYLEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIK 119
+ ++G P +N + S+ K ++ ++ E K K
Sbjct: 115 FSGCQMGIPTISVPIGDPQSNRNPQLSSEAWKKELKELASRVAFLT------KEDELKKK 168
Query: 120 ECFKTSSENPLVIKKEEIKAKRPPSPPKACSTPGSCSSGM-TSTKNDVKANTICIPNYLD 178
E K E PL + + A+ P + G S +++ + + D
Sbjct: 169 E--KEQKEEPLREQGAKYSAETGRLIPASTRAVGRRRSHQGQQSQSSSRHEGVQAFLLQD 226
Query: 179 QEIKILAKLCSILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAE------INLLTH-- 230
QE+ +L LC IL TD L+ + WLL+A KEK+ L+ + +A+ +++ T
Sbjct: 227 QELLVLELLCQILETDLLSAIQFWLLYAPPKEKDLALGLLQTAVAQLLPQPLVSIPTEKL 286
Query: 231 -HRRNTSMEPAAETGKPPTVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENK 289
+ EP E +PP +SP K+ P FT KS+ E SSQ +E+
Sbjct: 287 LSQLPEVHEPPQEKQEPPCSQSPKKTKISP-FT-KSEKPEYIGEAQVLQMHSSQNTEKKT 344
Query: 290 EVPK 293
P+
Sbjct: 345 SKPR 348
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 40.0 bits (92), Expect = 0.003
Identities = 67/279 (24%), Positives = 103/279 (36%), Gaps = 34/279 (12%)
Query: 86 STAVQKSPVRGMSP------APNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKA 139
S A KSP + SP +P AK P + ++ ++K K S K E KA
Sbjct: 594 SPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPE-KA 652
Query: 140 KRP-----PSPPKACSTPGSCSSGMTSTKNDVKANTIC---IPNYLDQEIKILAKLCSIL 191
K P SP KA S + + K+ VKA + + +E K K S +
Sbjct: 653 KSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPV 712
Query: 192 HTDS---------LAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAE 242
++ + E + A S KE + ++ E + + PA E
Sbjct: 713 KEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKE 772
Query: 243 TGKPPTVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPPLL 302
+ P K P K P KS + P + ++ E KE+PK+ E K P+
Sbjct: 773 EARSPADKFPEKAKSPVKEEVKS-----PEKAKSPLKEDAKAPE--KEIPKKEEVKSPVK 825
Query: 303 IRRNNMKIPVAEYFSK---PNSPPRPNTQESGSAKPVSA 338
++ V E K +P P T+E +K A
Sbjct: 826 EEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEA 864
Score = 40.0 bits (92), Expect = 0.003
Identities = 68/287 (23%), Positives = 113/287 (39%), Gaps = 40/287 (13%)
Query: 85 PSTAVQKSPVRGMSP------APNGAKVPPRPHSEPSRKIKECFKTSSENPLVIK---KE 135
P A KSP + SP +P AK P + ++ K K K ++ P K KE
Sbjct: 683 PVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKE 742
Query: 136 EIKA-KRPPSPPKACSTPGSCSSGMTSTKNDVKANTICIP----NYLDQEIKILAKLCSI 190
E K+ ++ SP KA + T K + ++ P + + +E+K K S
Sbjct: 743 EAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSP 802
Query: 191 LHTDSLAEVLQ----WLLHATSKEKEWVSAL--------IHSELAEINLLTHHRRNTSME 238
L D+ A + + + KE+E + E A T ++++ E
Sbjct: 803 LKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKE 862
Query: 239 --PAAETGKPPT-VKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSE--ENKEVPK 293
P E KP K P V+ P +SKV + E + +V + E EV +
Sbjct: 863 EAPKKEAPKPKVEEKKEPAVEKP----KESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKE 918
Query: 294 EAEHKPPLLIRRNNMKIPVAEYFSKP-----NSPPRPNTQESGSAKP 335
+A+ K + + A+ SKP +P + +T+E + KP
Sbjct: 919 DAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKP 965
Score = 37.7 bits (86), Expect = 0.016
Identities = 68/274 (24%), Positives = 99/274 (36%), Gaps = 61/274 (22%)
Query: 91 KSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPPSPPKACS 150
KSPV+ + +P AK P + ++ ++K K S KEE K SPP+A S
Sbjct: 517 KSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSP-----AKEEAK-----SPPEAKS 566
Query: 151 TPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHTDSLAEVLQWLLHATSKE 210
+ K+ KA + +E K A+ S S KE
Sbjct: 567 PEKEEAKSPAEVKSPEKAKSPA-----KEEAKSPAEAKSPEKAKSPV-----------KE 610
Query: 211 KEWVSALIHSELAEINLLTHHRRNTSMEPAAETGKPPTVKSPPTVKLPPNFTAKSKVLTR 270
+ A S + E E P VKSP K P AKS +
Sbjct: 611 EAKSPAEAKSPVKE-----------------EAKSPAEVKSPEKAKSPTKEEAKSPEKAK 653
Query: 271 DTEGDQ---------PTRVSSQGSEENKEVPKEAEHKPPLLIRRNNMKIPVAEYFSKPNS 321
E ++ P + ++ E+ K P +AE K P K PV E P
Sbjct: 654 SPEKEEAKSPEKAKSPVKAEAKSPEKAKS-PVKAEAKSP-----EKAKSPVKEEAKSPEK 707
Query: 322 PPRPNTQESGSAKPVSARS-IQEYNLCPQRACYP 354
P +E+ S P A+S ++E P++A P
Sbjct: 708 AKSPVKEEAKS--PEKAKSPVKEEAKTPEKAKSP 739
Score = 37.4 bits (85), Expect = 0.021
Identities = 55/235 (23%), Positives = 86/235 (36%), Gaps = 22/235 (9%)
Query: 85 PSTAVQKSPVRGMSP------APNGAKVPPRPHSEPSRKIKECFKTSSENPLVIK---KE 135
P A KSP + SP +P AK P + ++ K K K +++P K KE
Sbjct: 669 PVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKE 728
Query: 136 EIKAKRPPSPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHTDS 195
E K +P KA S + K+ KA T+ + + E K AK + D
Sbjct: 729 EAK-----TPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKS---PEAKTPAKEEARSPADK 780
Query: 196 LAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAETGKPPTVKSPPTV 255
E + + K E + + E A+ ++ P E KP VK V
Sbjct: 781 FPEKAKSPVKEEVKSPEKAKSPL-KEDAKAPEKEIPKKEEVKSPVKEEEKPQEVK----V 835
Query: 256 KLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPPLLIRRNNMKI 310
K PP + K ++ + ++ PK E K P + + K+
Sbjct: 836 KEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKV 890
Score = 35.0 bits (79), Expect = 0.10
Identities = 64/259 (24%), Positives = 84/259 (32%), Gaps = 50/259 (19%)
Query: 86 STAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSS-ENPLVIKKEEIKAKRPPS 144
S A KSP + SPA AK PP S + K + S E KEE K+
Sbjct: 540 SPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAK 599
Query: 145 PPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHTDSLAEVLQWLL 204
P+ +P K + K+ P +K AK S AEV
Sbjct: 600 SPEKAKSP---------VKEEAKS-----PAEAKSPVKEEAK--------SPAEV----- 632
Query: 205 HATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAETGKPPT---VKSPPTVKLPPNF 261
K E + E + + P E K P KSP K P
Sbjct: 633 ----KSPEKAKSPTKEEAKSPEKAKSPEKEEAKSP--EKAKSPVKAEAKSPEKAKSPVKA 686
Query: 262 TAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPPLLIRRNNMKIPVAEYFSKPNS 321
AKS + P + ++ E+ K KE P K PV E P
Sbjct: 687 EAKS-----PEKAKSPVKEEAKSPEKAKSPVKEEAKSP------EKAKSPVKEEAKTPEK 735
Query: 322 PPRPNTQESGSAKPVSARS 340
P +E+ S P A+S
Sbjct: 736 AKSPVKEEAKS--PEKAKS 752
Score = 29.6 bits (65), Expect = 4.4
Identities = 29/110 (26%), Positives = 39/110 (35%), Gaps = 5/110 (4%)
Query: 236 SMEPAAETGKPPTVKSPPTVKLPPNFTAKSKVLTRDTE-GDQPTRVSSQGSEENKEVPKE 294
S E A++ KSP K P AKS + E P + ++ E K KE
Sbjct: 511 SPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKE 570
Query: 295 AEHKPPLLIRRNNMKIPVAEYFSKP---NSPPRPNTQESGSAK-PVSARS 340
P + K P E P SP + + AK P A+S
Sbjct: 571 EAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKS 620
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 37.4 bits (85), Expect = 0.021
Identities = 62/293 (21%), Positives = 117/293 (39%), Gaps = 41/293 (13%)
Query: 86 STAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIK-ECFKTSSENPLVIKKEEIKAKRPPS 144
S+A K ++ P P S I E F + + + ++ K+
Sbjct: 786 SSATAKPLGENLTSQQKNLSNTPEPIIMSSSSIAPEAFPSEDLHNKTLSQQTCKSHVDTE 845
Query: 145 PPKACSTPGSCSSGMTSTKNDV---KANTICIPNYLDQEIKILAKLCSILHTDSLAEVLQ 201
P S P S+ M KN + +P+ L E+ + ++ TD+ L
Sbjct: 846 KPYPASIPELASTEMIKVKNHSVLQRTEKKVLPSPL--ELSVFSE-----GTDNKGNELP 898
Query: 202 WLLHATSKEKEWVSALIHSELAEINLLTHHRRNTS---MEPAAETGKPPTVKSPPTVKLP 258
A ++K+++S++ + +E + H++ ++ +E + + KSP ++
Sbjct: 899 ---SAKLQDKQYISSVDKAPFSEGSRNKTHKQGSTQSRLETSHTSKSSEPSKSPDGIR-- 953
Query: 259 PNFTAKSKVLTRDT----------------EGDQPTR-VSSQGSEENKEVPKEAEHKPPL 301
N + S++ R T E DQ TR +SS E ++ P+E PPL
Sbjct: 954 -NESRDSEISKRKTAEQHSFGICKEKRARIEDDQSTRNISSSSPPEKEQPPREEPRVPPL 1012
Query: 302 LIRRNNMKIPV---AEYFSKPNSPPRPNTQESGSAKPVSARSIQEYNLCPQRA 351
I+ + + P ++ SKP S +T SG + AR++ + Q+A
Sbjct: 1013 KIQLSKIGPPFIIKSQPVSKPESRASTSTSVSG-GRNTGARTLADIKARAQQA 1064
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 36.2 bits (82), Expect = 0.047
Identities = 39/179 (21%), Positives = 64/179 (35%), Gaps = 35/179 (19%)
Query: 84 PPSTAVQKSPVRGMSPAPNGAKVPP--RPHSEPSRKIKECFKTSSENPLVIKKEEIKAKR 141
P S+ +PV G P P+ A+ P RP S ++ + +P+ + + A
Sbjct: 662 PTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATNKAL---------SPVTSRTPGVVASA 712
Query: 142 PPSPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLC------------- 188
P P +P ++ + D I + N + Q I L K
Sbjct: 713 PTKP----QSPAQNATSSQDSSQDTLTEQITLENQVHQRIAELRKAGLWSQRRLPKLQEA 768
Query: 189 --SILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAETGK 245
H D L E +QW+ ++E+ W A + + + HH E E GK
Sbjct: 769 PRPKSHWDYLLEEMQWMATDFAQERRWKVAAAKKLVRTV--VRHHEEKQLRE---ERGK 822
>gi|57222563 colonic and hepatic tumor over-expressed protein isoform
b [Homo sapiens]
Length = 1972
Score = 35.4 bits (80), Expect = 0.080
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (14%)
Query: 71 LEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPL 130
LEK ++ PP+ A K P+ G +PA +P S P+ ++C +S+E
Sbjct: 1073 LEKAKVNMPAKPAPPTKATSK-PMGGSAPAKF------QPASAPA---EDCISSSTEP-- 1120
Query: 131 VIKKEEIKAKRPPSPPKACSTPGSCSSGMTSTKNDVKAN---TICIPNYLDQEIK 182
K + KAK P KA S G TS K D + I +PN +Q +K
Sbjct: 1121 --KPDPKKAKAPGLSSKAKSAQGKKMPSKTSLKEDEDKSGPIFIVVPNGKEQRMK 1173
>gi|57164942 colonic and hepatic tumor over-expressed protein isoform
a [Homo sapiens]
Length = 2032
Score = 35.4 bits (80), Expect = 0.080
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 17/115 (14%)
Query: 71 LEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPL 130
LEK ++ PP+ A K P+ G +PA +P S P+ ++C +S+E
Sbjct: 1073 LEKAKVNMPAKPAPPTKATSK-PMGGSAPAKF------QPASAPA---EDCISSSTEP-- 1120
Query: 131 VIKKEEIKAKRPPSPPKACSTPGSCSSGMTSTKNDVKAN---TICIPNYLDQEIK 182
K + KAK P KA S G TS K D + I +PN +Q +K
Sbjct: 1121 --KPDPKKAKAPGLSSKAKSAQGKKMPSKTSLKEDEDKSGPIFIVVPNGKEQRMK 1173
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 35.0 bits (79), Expect = 0.10
Identities = 57/259 (22%), Positives = 95/259 (36%), Gaps = 53/259 (20%)
Query: 90 QKSPV-RGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEI-------KAKR 141
+K PV +G+ P AK PP+ + +S + P +K +I + K
Sbjct: 142 KKQPVQKGVKPQAKAAKAPPKKAKSSD---SDSDSSSEDEPPKNQKPKITPVTVKAQTKA 198
Query: 142 PPSPPKAC--------STPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHT 193
PP P +A ++ S SS +S+ + + P + +++AK
Sbjct: 199 PPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAP----- 253
Query: 194 DSLAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAETGKPPTVKSPP 253
+ AT+ ++ S SE + + ++ +P + PP PP
Sbjct: 254 ---------VKAATTPTRKSSS----SEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPP 300
Query: 254 TVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPPLLIRRNNMKIPVA 313
L K+ E QP S S+E+ + E E KPP K V+
Sbjct: 301 KKSLGTQPPKKA------VEKQQPVESSEDSSDES-DSSSEEEKKPP-------TKAVVS 346
Query: 314 EYFSKPNSPPRPNTQESGS 332
+ +KP PP ES S
Sbjct: 347 KATTKP--PPAKKAAESSS 363
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 35.0 bits (79), Expect = 0.10
Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 25/253 (9%)
Query: 90 QKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPPSPPKAC 149
++ P + + K P R H++ S KE K EN +K+E+I K PK
Sbjct: 204 KEKPSKDSREHKSAFKEPSRDHNKSS---KESSKKPKENK-PLKEEKIVPKMAFKEPKPM 259
Query: 150 ST-PGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHTDSLAEVLQW---LLH 205
S P S+ +T T K P D E ++ AK +++L + L+
Sbjct: 260 SKEPKPDSNLLTITSGQDKKAPSKRPPISDSE-ELSAKKRKKSSSEALFKSFSSAPPLIL 318
Query: 206 ATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAETGKPPTVKSPPTVKL-PPNFTAK 264
S +K+ + H ++ ++ + +ET + PP + PN +
Sbjct: 319 TCSADKKQIKDKSHVKMGKVKI------------ESETSEKKKSTLPPFDDIVDPNDSDV 366
Query: 265 SKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPPLLIRRNNMKIPVAEYFSKPNSPPR 324
+ ++ ++ +QP+ SS S + P + + PL R+ MK ++ + +
Sbjct: 367 EENISSKSDSEQPSPASSSSSSSSSFTPSQTRQQGPL---RSIMKDLHSDDNEEESDEVE 423
Query: 325 PNTQESGSAKPVS 337
N +S +PV+
Sbjct: 424 DNDNDSEMERPVN 436
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 35.0 bits (79), Expect = 0.10
Identities = 64/256 (25%), Positives = 91/256 (35%), Gaps = 33/256 (12%)
Query: 67 QSNYLEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSS 126
QS EK P S PS Q P G +P +K PRP S+ KI SS
Sbjct: 784 QSQAEEKTTPPLKTDSAKPS---QSFPPTGEKVSPFDSKAIPRPASDS--KIISHPGPSS 838
Query: 127 EN-------PLVIKKEEIKAKRPPSP-------PKACSTPGSCSSGMTSTKNDVKANTIC 172
E+ P+ K+E KA+ SP PK TP G T
Sbjct: 839 ESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTP----PGPRPTAGQTVPTPQQ 894
Query: 173 IPNYLDQEIKILAKLCSILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAE-INLLTHH 231
P +Q + L SI TD+ + + A I S+ + I+
Sbjct: 895 SPKPQEQSRRFSLNLGSI--TDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQP 952
Query: 232 RRNTSMEPAAETGKPPTVKSPPTVKLPPNFT-------AKSKVLTRDTEGDQPTRVSSQG 284
++ P A + P PPT + PP T AKS + ++T+ ++ +
Sbjct: 953 GPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKA 1012
Query: 285 SEENKEVPKEAEHKPP 300
+ E E KPP
Sbjct: 1013 EQAPTVKRTETEKKPP 1028
Score = 33.5 bits (75), Expect = 0.30
Identities = 51/263 (19%), Positives = 86/263 (32%), Gaps = 28/263 (10%)
Query: 84 PPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPP 143
P K P + A A+ P + K +T S PL AK+PP
Sbjct: 521 PQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPP 580
Query: 144 SPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHTDSLAEVLQW- 202
S + C++ KAN N + + LC L EV +W
Sbjct: 581 SQGLPKTICPLCNTTELLLHVPEKANF----NTCTECQTTVCSLCGFNPNPHLTEVKEWL 636
Query: 203 -------------LLHATSKEKEWVSALIHSELAEINLLTHHRRNTS----------MEP 239
L S + + + + ++ + + TS +
Sbjct: 637 CLNCQMKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSK 696
Query: 240 AAETGKPPTVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKP 299
A E KPP + PT+ P+ AK P + S SE++K + + K
Sbjct: 697 APEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQ 756
Query: 300 PLLIRRNNMKIPVAEYFSKPNSP 322
P +++ + + +KP+ P
Sbjct: 757 PKMVKPTTDLVSSSSATTKPDIP 779
Score = 30.8 bits (68), Expect = 2.0
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 22/116 (18%)
Query: 242 ETGKPPTVKSPPTVKLPPNFTAKSKVLTRD--TEGDQPTRVSSQGSEENKEVPK---EAE 296
E GKP + PP + PP K + RD + P +SSQ E+ K P +
Sbjct: 199 EQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPI 258
Query: 297 HKPPLLIRRNNMKIPVAEYFSKPN-----------------SPPRPNTQESGSAKP 335
P + ++ K+P+ S+P SP +P Q+ KP
Sbjct: 259 QGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKP 314
Score = 29.6 bits (65), Expect = 4.4
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 80 NCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKA 139
NC + + Q +R M PAP+G K P P S K + ++KK+E +
Sbjct: 1108 NCQTQRAISGQLGDIRKMPPAPSGPKASPMPVPTESSSQKTAVPPQVK---LVKKQEQEV 1164
Query: 140 K 140
K
Sbjct: 1165 K 1165
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 35.0 bits (79), Expect = 0.10
Identities = 64/256 (25%), Positives = 91/256 (35%), Gaps = 33/256 (12%)
Query: 67 QSNYLEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSS 126
QS EK P S PS Q P G +P +K PRP S+ KI SS
Sbjct: 784 QSQAEEKTTPPLKTDSAKPS---QSFPPTGEKVSPFDSKAIPRPASDS--KIISHPGPSS 838
Query: 127 EN-------PLVIKKEEIKAKRPPSP-------PKACSTPGSCSSGMTSTKNDVKANTIC 172
E+ P+ K+E KA+ SP PK TP G T
Sbjct: 839 ESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTP----PGPRPTAGQTVPTPQQ 894
Query: 173 IPNYLDQEIKILAKLCSILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAE-INLLTHH 231
P +Q + L SI TD+ + + A I S+ + I+
Sbjct: 895 SPKPQEQSRRFSLNLGSI--TDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQP 952
Query: 232 RRNTSMEPAAETGKPPTVKSPPTVKLPPNFT-------AKSKVLTRDTEGDQPTRVSSQG 284
++ P A + P PPT + PP T AKS + ++T+ ++ +
Sbjct: 953 GPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEKLEPKA 1012
Query: 285 SEENKEVPKEAEHKPP 300
+ E E KPP
Sbjct: 1013 EQAPTVKRTETEKKPP 1028
Score = 33.5 bits (75), Expect = 0.30
Identities = 51/263 (19%), Positives = 86/263 (32%), Gaps = 28/263 (10%)
Query: 84 PPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPP 143
P K P + A A+ P + K +T S PL AK+PP
Sbjct: 521 PQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPP 580
Query: 144 SPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHTDSLAEVLQW- 202
S + C++ KAN N + + LC L EV +W
Sbjct: 581 SQGLPKTICPLCNTTELLLHVPEKANF----NTCTECQTTVCSLCGFNPNPHLTEVKEWL 636
Query: 203 -------------LLHATSKEKEWVSALIHSELAEINLLTHHRRNTS----------MEP 239
L S + + + + ++ + + TS +
Sbjct: 637 CLNCQMKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSK 696
Query: 240 AAETGKPPTVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKP 299
A E KPP + PT+ P+ AK P + S SE++K + + K
Sbjct: 697 APEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQ 756
Query: 300 PLLIRRNNMKIPVAEYFSKPNSP 322
P +++ + + +KP+ P
Sbjct: 757 PKMVKPTTDLVSSSSATTKPDIP 779
Score = 30.8 bits (68), Expect = 2.0
Identities = 29/116 (25%), Positives = 44/116 (37%), Gaps = 22/116 (18%)
Query: 242 ETGKPPTVKSPPTVKLPPNFTAKSKVLTRD--TEGDQPTRVSSQGSEENKEVPK---EAE 296
E GKP + PP + PP K + RD + P +SSQ E+ K P +
Sbjct: 199 EQGKPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPI 258
Query: 297 HKPPLLIRRNNMKIPVAEYFSKPN-----------------SPPRPNTQESGSAKP 335
P + ++ K+P+ S+P SP +P Q+ KP
Sbjct: 259 QGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKP 314
Score = 29.6 bits (65), Expect = 4.4
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 80 NCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKA 139
NC + + Q +R M PAP+G K P P S K + ++KK+E +
Sbjct: 1108 NCQTQRAISGQLGDIRKMPPAPSGPKASPMPVPTESSSQKTAVPPQVK---LVKKQEQEV 1164
Query: 140 K 140
K
Sbjct: 1165 K 1165
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 33.9 bits (76), Expect = 0.23
Identities = 56/260 (21%), Positives = 83/260 (31%), Gaps = 25/260 (9%)
Query: 85 PSTAVQKSPVRGMSPAPNGAK-VPPRPHSEPSRKIKECFKTSSENPLVIKKEE-IKAKRP 142
P T+ + SP AK + PRP P+ TS E L + KE ++ K
Sbjct: 102 PDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSD------TSKETSLTVNKETTVETKET 155
Query: 143 PSPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHTDSLAEVLQW 202
+ K ST G T++ + ++ L K+LAK T + L
Sbjct: 156 TTTNKQTSTDGK---EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTT 212
Query: 203 LLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAETGKPPTVKSPPTVKLPPNFT 262
T + ++ E + + T EPA P T KS PT P T
Sbjct: 213 PKEPTPTTPKEPASTTPKEPTPTTIKS--APTTPKEPA-----PTTTKSAPTTPKEPAPT 265
Query: 263 AKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPPLLIRRNNMKIPVAEYFSKPNSP 322
+ + PT K P + P ++ P + P P
Sbjct: 266 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 325
Query: 323 -------PRPNTQESGSAKP 335
P P T+E P
Sbjct: 326 TPTTPKEPAPTTKEPAPTTP 345
Score = 31.6 bits (70), Expect = 1.2
Identities = 59/285 (20%), Positives = 96/285 (33%), Gaps = 46/285 (16%)
Query: 85 PSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKE------EIK 138
P+T + +P PAP + PP SE S T+++ P I K E+
Sbjct: 694 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVST------PTTTKEPTTIHKSPDESTPELS 747
Query: 139 AKRPP----SPPK-----ACSTPGSCSSGMTSTKND---------VKANTICIPNYLDQE 180
A+ P + PK TP + MT+T D T P +
Sbjct: 748 AEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMTKET 807
Query: 181 IKILAKLCSILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTS--ME 238
K T + +V T+ K ++ L + LA T T+ M
Sbjct: 808 ATTTEKTTESKITATTTQVTSTTTQDTTPFK--ITTLKTTTLAPKVTTTKKTITTTEIMN 865
Query: 239 PAAETGKPP--TVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAE 296
ET KP S T P T K + T +P + + P++
Sbjct: 866 KPEETAKPKDRATNSKATTPKPQKPTKAPK---KPTSTKKPKTMPRVRKPKTTPTPRKMT 922
Query: 297 HKPPLLIRRNNMKIPVAEYFSKPNSPP-------RPNTQESGSAK 334
P L + + + + ++PN P P ++++G A+
Sbjct: 923 STMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAE 967
Score = 29.3 bits (64), Expect = 5.7
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 85 PSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPPS 144
P+T + SP PAP K P EP+ + T+ + P +E P
Sbjct: 374 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 433
Query: 145 PPKACSTP 152
P A +TP
Sbjct: 434 P--APTTP 439
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 33.9 bits (76), Expect = 0.23
Identities = 56/260 (21%), Positives = 83/260 (31%), Gaps = 25/260 (9%)
Query: 85 PSTAVQKSPVRGMSPAPNGAK-VPPRPHSEPSRKIKECFKTSSENPLVIKKEE-IKAKRP 142
P T+ + SP AK + PRP P+ TS E L + KE ++ K
Sbjct: 143 PDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSD------TSKETSLTVNKETTVETKET 196
Query: 143 PSPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHTDSLAEVLQW 202
+ K ST G T++ + ++ L K+LAK T + L
Sbjct: 197 TTTNKQTSTDGK---EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTT 253
Query: 203 LLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAETGKPPTVKSPPTVKLPPNFT 262
T + ++ E + + T EPA P T KS PT P T
Sbjct: 254 PKEPTPTTPKEPASTTPKEPTPTTIKS--APTTPKEPA-----PTTTKSAPTTPKEPAPT 306
Query: 263 AKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPPLLIRRNNMKIPVAEYFSKPNSP 322
+ + PT K P + P ++ P + P P
Sbjct: 307 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 366
Query: 323 -------PRPNTQESGSAKP 335
P P T+E P
Sbjct: 367 TPTTPKEPAPTTKEPAPTTP 386
Score = 31.6 bits (70), Expect = 1.2
Identities = 59/285 (20%), Positives = 96/285 (33%), Gaps = 46/285 (16%)
Query: 85 PSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKE------EIK 138
P+T + +P PAP + PP SE S T+++ P I K E+
Sbjct: 735 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVST------PTTTKEPTTIHKSPDESTPELS 788
Query: 139 AKRPP----SPPK-----ACSTPGSCSSGMTSTKND---------VKANTICIPNYLDQE 180
A+ P + PK TP + MT+T D T P +
Sbjct: 789 AEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMTKET 848
Query: 181 IKILAKLCSILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTS--ME 238
K T + +V T+ K ++ L + LA T T+ M
Sbjct: 849 ATTTEKTTESKITATTTQVTSTTTQDTTPFK--ITTLKTTTLAPKVTTTKKTITTTEIMN 906
Query: 239 PAAETGKPP--TVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAE 296
ET KP S T P T K + T +P + + P++
Sbjct: 907 KPEETAKPKDRATNSKATTPKPQKPTKAPK---KPTSTKKPKTMPRVRKPKTTPTPRKMT 963
Query: 297 HKPPLLIRRNNMKIPVAEYFSKPNSPP-------RPNTQESGSAK 334
P L + + + + ++PN P P ++++G A+
Sbjct: 964 STMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAE 1008
Score = 29.3 bits (64), Expect = 5.7
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 85 PSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPPS 144
P+T + SP PAP K P EP+ + T+ + P +E P
Sbjct: 415 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 474
Query: 145 PPKACSTP 152
P A +TP
Sbjct: 475 P--APTTP 480
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 33.9 bits (76), Expect = 0.23
Identities = 56/260 (21%), Positives = 83/260 (31%), Gaps = 25/260 (9%)
Query: 85 PSTAVQKSPVRGMSPAPNGAK-VPPRPHSEPSRKIKECFKTSSENPLVIKKEE-IKAKRP 142
P T+ + SP AK + PRP P+ TS E L + KE ++ K
Sbjct: 195 PDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSD------TSKETSLTVNKETTVETKET 248
Query: 143 PSPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHTDSLAEVLQW 202
+ K ST G T++ + ++ L K+LAK T + L
Sbjct: 249 TTTNKQTSTDGK---EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTT 305
Query: 203 LLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAETGKPPTVKSPPTVKLPPNFT 262
T + ++ E + + T EPA P T KS PT P T
Sbjct: 306 PKEPTPTTPKEPASTTPKEPTPTTIKS--APTTPKEPA-----PTTTKSAPTTPKEPAPT 358
Query: 263 AKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPPLLIRRNNMKIPVAEYFSKPNSP 322
+ + PT K P + P ++ P + P P
Sbjct: 359 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 418
Query: 323 -------PRPNTQESGSAKP 335
P P T+E P
Sbjct: 419 TPTTPKEPAPTTKEPAPTTP 438
Score = 31.6 bits (70), Expect = 1.2
Identities = 59/285 (20%), Positives = 96/285 (33%), Gaps = 46/285 (16%)
Query: 85 PSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKE------EIK 138
P+T + +P PAP + PP SE S T+++ P I K E+
Sbjct: 787 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVST------PTTTKEPTTIHKSPDESTPELS 840
Query: 139 AKRPP----SPPK-----ACSTPGSCSSGMTSTKND---------VKANTICIPNYLDQE 180
A+ P + PK TP + MT+T D T P +
Sbjct: 841 AEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMTKET 900
Query: 181 IKILAKLCSILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTS--ME 238
K T + +V T+ K ++ L + LA T T+ M
Sbjct: 901 ATTTEKTTESKITATTTQVTSTTTQDTTPFK--ITTLKTTTLAPKVTTTKKTITTTEIMN 958
Query: 239 PAAETGKPP--TVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAE 296
ET KP S T P T K + T +P + + P++
Sbjct: 959 KPEETAKPKDRATNSKATTPKPQKPTKAPK---KPTSTKKPKTMPRVRKPKTTPTPRKMT 1015
Query: 297 HKPPLLIRRNNMKIPVAEYFSKPNSPP-------RPNTQESGSAK 334
P L + + + + ++PN P P ++++G A+
Sbjct: 1016 STMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAE 1060
Score = 29.3 bits (64), Expect = 5.7
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 85 PSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPPS 144
P+T + SP PAP K P EP+ + T+ + P +E P
Sbjct: 467 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 526
Query: 145 PPKACSTP 152
P A +TP
Sbjct: 527 P--APTTP 532
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 33.9 bits (76), Expect = 0.23
Identities = 56/260 (21%), Positives = 83/260 (31%), Gaps = 25/260 (9%)
Query: 85 PSTAVQKSPVRGMSPAPNGAK-VPPRPHSEPSRKIKECFKTSSENPLVIKKEE-IKAKRP 142
P T+ + SP AK + PRP P+ TS E L + KE ++ K
Sbjct: 236 PDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSD------TSKETSLTVNKETTVETKET 289
Query: 143 PSPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAKLCSILHTDSLAEVLQW 202
+ K ST G T++ + ++ L K+LAK T + L
Sbjct: 290 TTTNKQTSTDGK---EKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTT 346
Query: 203 LLHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAETGKPPTVKSPPTVKLPPNFT 262
T + ++ E + + T EPA P T KS PT P T
Sbjct: 347 PKEPTPTTPKEPASTTPKEPTPTTIKS--APTTPKEPA-----PTTTKSAPTTPKEPAPT 399
Query: 263 AKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPPLLIRRNNMKIPVAEYFSKPNSP 322
+ + PT K P + P ++ P + P P
Sbjct: 400 TTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 459
Query: 323 -------PRPNTQESGSAKP 335
P P T+E P
Sbjct: 460 TPTTPKEPAPTTKEPAPTTP 479
Score = 31.6 bits (70), Expect = 1.2
Identities = 59/285 (20%), Positives = 96/285 (33%), Gaps = 46/285 (16%)
Query: 85 PSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKE------EIK 138
P+T + +P PAP + PP SE S T+++ P I K E+
Sbjct: 828 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVST------PTTTKEPTTIHKSPDESTPELS 881
Query: 139 AKRPP----SPPK-----ACSTPGSCSSGMTSTKND---------VKANTICIPNYLDQE 180
A+ P + PK TP + MT+T D T P +
Sbjct: 882 AEPTPKALENSPKEPGVPTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAAPKMTKET 941
Query: 181 IKILAKLCSILHTDSLAEVLQWLLHATSKEKEWVSALIHSELAEINLLTHHRRNTS--ME 238
K T + +V T+ K ++ L + LA T T+ M
Sbjct: 942 ATTTEKTTESKITATTTQVTSTTTQDTTPFK--ITTLKTTTLAPKVTTTKKTITTTEIMN 999
Query: 239 PAAETGKPP--TVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAE 296
ET KP S T P T K + T +P + + P++
Sbjct: 1000 KPEETAKPKDRATNSKATTPKPQKPTKAPK---KPTSTKKPKTMPRVRKPKTTPTPRKMT 1056
Query: 297 HKPPLLIRRNNMKIPVAEYFSKPNSPP-------RPNTQESGSAK 334
P L + + + + ++PN P P ++++G A+
Sbjct: 1057 STMPELNPTSRIAEAMLQTTTRPNQTPNSKLVEVNPKSEDAGGAE 1101
Score = 29.3 bits (64), Expect = 5.7
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 85 PSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPPS 144
P+T + SP PAP K P EP+ + T+ + P +E P
Sbjct: 508 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 567
Query: 145 PPKACSTP 152
P A +TP
Sbjct: 568 P--APTTP 573
>gi|115334682 SNAP25-interacting protein [Homo sapiens]
Length = 1183
Score = 33.9 bits (76), Expect = 0.23
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 76 IPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKE 135
IP +C+ +P AP+G K PR +EPS + + S E + +
Sbjct: 945 IPDLDCASKAHPGPAPTPDHKPPKAPHGQKAAPR--TEPSGR-----RGSDELTVPRYRT 997
Query: 136 EIKAKRPPSPPKACSTPGSCSSGMTSTK 163
E +K PP PP S P S G+T+T+
Sbjct: 998 EKPSKSPPPPPPRRSFPS--SHGLTTTR 1023
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 33.5 bits (75), Expect = 0.30
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 77 PFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTS-SENPLVIKKE 135
P A+ S ++A + + PAP+G+ PP P PS ++ TS + +PL
Sbjct: 547 PLADTSLVTASAKVLPTPQPLLPAPSGSSAPPHPAKMPSGTEQQTEGTSVTFSPL----- 601
Query: 136 EIKAKRPPSPPKACSTPGSCSSGMTSTKNDVKANTICIPN 175
K PP + ++P CS + + +PN
Sbjct: 602 ----KSPPQLEREMASPPECSEMPLDLSSKSNRQKLPLPN 637
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 33.1 bits (74), Expect = 0.40
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 241 AETGKPPTVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGS----EENKEVP---- 292
A+ G P + ++PP T + +G + + S +GS ++ KE P
Sbjct: 69 AQAGGKPGKRPGTAAEVPPEKTKDKGKKGKKDKGPKVPKESLEGSPRPPKKGKEKPPKAT 128
Query: 293 KEAEHKPPLLIRRNNMKIPVAEYFSKPNSPPRPNTQESGSAKPVSARS 340
K+ + KPP ++ K P A K P SG P+ A S
Sbjct: 129 KKPKEKPPKATKKPKEKPPKATKKPKEKPPKATKKPPSGKRPPILAPS 176
Score = 28.9 bits (63), Expect = 7.5
Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 84 PPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPP 143
PP +K P P PP+ +P K + K E P K+ KRPP
Sbjct: 116 PPKKGKEKPPKATKKPKEK----PPKATKKPKEKPPKATKKPKEKPPKATKKPPSGKRPP 171
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 33.1 bits (74), Expect = 0.40
Identities = 51/231 (22%), Positives = 77/231 (33%), Gaps = 47/231 (20%)
Query: 127 ENPLVIKKEEIKAKRPPSPPKACSTPGSCSSGMTSTKNDVKANTICIPNYLDQEIKILAK 186
E +I E KRP P+A P + STK D LD + +
Sbjct: 165 EEEEIINDENFLGKRPLDSPEAEELPAMKRPRLLSTKGDT----------LDVVLLEARE 214
Query: 187 LCSILHTDSLAEVLQWL-------LHATSKEKEWVSALIHSEL-----AEINLLTHHRRN 234
S ++T + +L + L S E ++ + S++ E T +
Sbjct: 215 PLSSINTQKIPPMLSPVHVQDSTDLAPPSPEPPMLAPVAKSQMPTAKPLETKSFTPKTKT 274
Query: 235 TSMEPAAETGKPPTVKSPPTVKLP---PNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEV 291
+ P +T P T +SP V P P +K K P R S S ++
Sbjct: 275 KTSSPGQKTKSPKTAQSPAMVGSPIRSPKTVSKEK--------KSPGRSKSPKSPKS--- 323
Query: 292 PKEAEHKPPLLIRRNNMKIPVAEYFSKPNSPPRPNTQESGSAKPVSARSIQ 342
PK H P +R PN P E S + + + IQ
Sbjct: 324 PKVTTHIPQTPVRPET-----------PNRTPSATLSEKISKETIQVKQIQ 363
>gi|115511030 hypothetical protein LOC115004 [Homo sapiens]
Length = 522
Score = 33.1 bits (74), Expect = 0.40
Identities = 31/112 (27%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 239 PAAETGKPPTVKSPPTVKLPPNFT--AKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAE 296
PA ++G +P T + PP A++K + + QP+ +S E E P E
Sbjct: 53 PARKSGSRQKKSAPDTQERPPVRATGARAKKAPQRAQDTQPSDATSAPGAEGLEPPAARE 112
Query: 297 HKPPLLIRRNNMKIPVAEYFSKPNSPPRPNTQESGSAKPVSARSIQEYNLCP 348
P L R + + A +KP PP P S PVSA + + P
Sbjct: 113 ---PALSRAGSCRQRGARCSTKPRPPPGPWDVPS-PGLPVSAPILVRRDAAP 160
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 32.7 bits (73), Expect = 0.52
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 67 QSNYLEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSS 126
Q + + ++ A S P S +SPVR SP+ ++ P S+ S + +T++
Sbjct: 2314 QPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQ--TRIRPSTPSQLSPGQQSQVQTTT 2371
Query: 127 ENPLVIKKE---EIKAK-RPPSPPKACSTPGSCSSGMTSTKNDVKA-------------N 169
P+ I+ +I ++ +P S P+ S+ + SSG T + V +
Sbjct: 2372 SQPIPIQPHTSLQIPSQGQPQSQPQVQSSTQTLSSGQTLNQVTVSSPSRPQLQIQQPQPQ 2431
Query: 170 TICIPNYLDQEIKILAKLCS 189
I +P L Q++++L+++ S
Sbjct: 2432 VIAVPQ-LQQQVQVLSQIQS 2450
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 32.7 bits (73), Expect = 0.52
Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 68 SNYLEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKI--KECFKTS 125
SN + + F PPS + +SPV SP P G P S S + E K S
Sbjct: 223 SNPKPQKQSHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPS 282
Query: 126 -SENPLVIKKEEIKAKRPPSPPKACSTPGSCSSGMTSTKNDVKAN 169
SE+P K + P P A S PGS G + K+N
Sbjct: 283 PSESPEPWKPFPAVSPEPRRPAPAVS-PGSWKPGPPGSPRPWKSN 326
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 32.7 bits (73), Expect = 0.52
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 14/100 (14%)
Query: 247 PTVKSPPTVKLPPNFTAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPPLLIRRN 306
P V V+ PP +K KV+ + D+P + ++ S KEVP + E P
Sbjct: 566 PEVTKVNHVEKPPKVESKEKVMVKK---DKPIKTETKPSVTEKEVPSKEEPSP------- 615
Query: 307 NMKIPVAEYFS---KPNSPPRPNTQESGSAKPVSARSIQE 343
+K VAE + KP + ++ KP + +E
Sbjct: 616 -VKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKE 654
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 32.7 bits (73), Expect = 0.52
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 96 GMSPAPNGAKVPPRPHSEPSRKIKECFKT-------SSENPLVIKKEEIKAKRPPSPPK 147
G +PA A PP PH+ PS E T S+ +P V + I+ + SPP+
Sbjct: 521 GGAPAWQPASAPPAPHANPSNPFYEALSTPSVLPVISARSPSVSSEYYIRLEEHGSPPE 579
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 32.3 bits (72), Expect = 0.67
Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 2/99 (2%)
Query: 204 LHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAE--TGKPPTVKSPPTVKLPPNF 261
+H S +++ L H + L H + + P A +PP PP PP
Sbjct: 24 VHFQSYPFDFLEFLNHQRFEPMELYGEHAKAVAALPCAPGPPPQPPPQPPPPQYDYPPQS 83
Query: 262 TAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPP 300
T K K + + SS S + ++ K P
Sbjct: 84 TFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKP 122
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 32.3 bits (72), Expect = 0.67
Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 2/99 (2%)
Query: 204 LHATSKEKEWVSALIHSELAEINLLTHHRRNTSMEPAAE--TGKPPTVKSPPTVKLPPNF 261
+H S +++ L H + L H + + P A +PP PP PP
Sbjct: 24 VHFQSYPFDFLEFLNHQRFEPMELYGEHAKAVAALPCAPGPPPQPPPQPPPPQYDYPPQS 83
Query: 262 TAKSKVLTRDTEGDQPTRVSSQGSEENKEVPKEAEHKPP 300
T K K + + SS S + ++ K P
Sbjct: 84 TFKPKAEVPSSSSSSSSSSSSSSSSSSSSSSSSSQAKKP 122
>gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]
Length = 1844
Score = 32.3 bits (72), Expect = 0.67
Identities = 31/150 (20%), Positives = 53/150 (35%), Gaps = 23/150 (15%)
Query: 226 NLLTHHRRNTSMEPAAETGKPPTVKSPPTVKLPPN--------------FTAKSKVLTRD 271
N+L + R+ + + GK +KSP +V + N F K K +
Sbjct: 61 NILDYFRKTSPTNEKTQLGKECKIKSPESVPVDSNKDCTTPLEMFSNVEFKKKRKRVNLS 120
Query: 272 -------TEGDQPTRVSSQGSEENKEVPKEAEHKPPLLIRRNNMKIPVAEYFSKPNSPPR 324
TE + P +SS S+E+ + + ++R +AE S P
Sbjct: 121 HQLNNIKTENEAPIEISSDDSKEDYSLNNDFVESSTSVLRYKKQVEVLAENIQDTKSQPN 180
Query: 325 PNT--QESGSAKPVSARSIQEYNLCPQRAC 352
T Q S P + ++ +R C
Sbjct: 181 TMTSLQNSKKVNPKQGTTKNDFKKLRKRKC 210
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 32.0 bits (71), Expect = 0.88
Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 6/92 (6%)
Query: 77 PFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKEC---FKTSSENPLVIK 133
P + PP T SP+ P P P + PS I T++ +P
Sbjct: 1668 PITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTT 1727
Query: 134 KEEIKAKRPPSPPKACST---PGSCSSGMTST 162
PSPP T P + SS +T+T
Sbjct: 1728 MTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTT 1759
Score = 29.3 bits (64), Expect = 5.7
Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 9/94 (9%)
Query: 84 PPSTAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPP 143
PP++ P SP P PP P + PS T++ +P I P
Sbjct: 1549 PPTSTTTLPPTTTPSPPPTTTTTPP-PTTTPSPP-----TTTTPSPPTITTTTPPPTTTP 1602
Query: 144 SPPKACST---PGSCSSGMTSTKNDVKANTICIP 174
SPP +T P + S T+T +T +P
Sbjct: 1603 SPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP 1636
>gi|38202209 methyl-CpG binding domain protein 5 [Homo sapiens]
Length = 1494
Score = 32.0 bits (71), Expect = 0.88
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 68 SNYLEKNRIPFANCSYPPSTAVQKSPVRGMSPAPNGAKVPPRPH---SEPSRKIKEC-FK 123
S+ + NR P + PPS + SPV+ +P P P K C F
Sbjct: 263 SSPIHLNRTPLS----PPSVMLHGSPVQSSCAMAGRTNIPLSPTLTTKSPVMKKPMCNFS 318
Query: 124 TSSENPLVIKKEEIKAKRPPSPPKACS 150
T+ E P + + PP PP +C+
Sbjct: 319 TNMEIPRAMFHHKPPQGPPPPPPPSCA 345
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 32.0 bits (71), Expect = 0.88
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 75 RIPFANCSYPP-STAVQKSPVRGMSPAPNGAKVPPRPHSEPSRKIKECFKTS-------S 126
R P + S PP SP R SP+P+ + + +KIK+ S S
Sbjct: 689 RAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVS 748
Query: 127 ENPLVIKKEEIKAKRPPSPP 146
+ V E AK+PP+PP
Sbjct: 749 SSRSVSGSPEPAAKKPPAPP 768
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,697,993
Number of Sequences: 37866
Number of extensions: 924027
Number of successful extensions: 4781
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 4176
Number of HSP's gapped (non-prelim): 712
length of query: 359
length of database: 18,247,518
effective HSP length: 103
effective length of query: 256
effective length of database: 14,347,320
effective search space: 3672913920
effective search space used: 3672913920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.