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Search of human proteins with 8922188
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922188 F-box only protein 6 [Homo sapiens]
(293 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922188 F-box only protein 6 [Homo sapiens] 621 e-178
gi|34878735 F-box protein 44 isoform 1 [Homo sapiens] 405 e-113
gi|62388868 F-box protein 44 isoform 1 [Homo sapiens] 405 e-113
gi|15812198 F-box only protein 2 [Homo sapiens] 264 8e-71
gi|34878749 F-box protein 44 isoform 2 [Homo sapiens] 209 2e-54
gi|34878753 F-box protein 44 isoform 2 [Homo sapiens] 209 2e-54
gi|30520327 F-box protein 27 [Homo sapiens] 199 3e-51
gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens] 174 8e-44
gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens] 174 8e-44
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol... 96 5e-20
gi|27312027 F-box only protein 16 [Homo sapiens] 41 0.001
gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo sap... 40 0.002
gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo sap... 40 0.002
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 39 0.004
gi|83035136 F-box protein 31 [Homo sapiens] 37 0.021
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H... 33 0.30
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 33 0.30
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 33 0.30
gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [H... 33 0.30
gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [H... 33 0.30
gi|124248558 F-box and WD-40 domain protein 9 [Homo sapiens] 33 0.30
gi|148922963 F-box and leucine-rich repeat protein 21 [Homo sapi... 30 3.3
gi|153792756 hypothetical protein LOC196951 [Homo sapiens] 30 3.3
gi|226442878 ADAMTS-like 5 [Homo sapiens] 29 4.3
gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens] 29 4.3
gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo sapi... 29 4.3
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 29 5.6
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 29 5.6
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 29 5.6
gi|157426875 F-box and leucine-rich repeat protein 18 [Homo sapi... 29 5.6
>gi|8922188 F-box only protein 6 [Homo sapiens]
Length = 293
Score = 621 bits (1602), Expect = e-178
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLR 60
MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLR
Sbjct: 1 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLR 60
Query: 61 EGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAH 120
EGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAH
Sbjct: 61 EGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAH 120
Query: 121 GTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCT 180
GTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCT
Sbjct: 121 GTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCT 180
Query: 181 YQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQ 240
YQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQ
Sbjct: 181 YQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQ 240
Query: 241 YWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQEEAAQSPYRAVVQIF 293
YWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQEEAAQSPYRAVVQIF
Sbjct: 241 YWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQEEAAQSPYRAVVQIF 293
>gi|34878735 F-box protein 44 isoform 1 [Homo sapiens]
Length = 255
Score = 405 bits (1042), Expect = e-113
Identities = 190/253 (75%), Positives = 210/253 (83%)
Query: 9 ALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGFITKDW 68
A+ +INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDL+TLWKRKCLREGFIT+DW
Sbjct: 2 AVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREGFITEDW 61
Query: 69 DQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPK 128
DQPVADWKIFYFLRSLHRNLL NPCAEE W +D NGGD WKVE L +FP+ +
Sbjct: 62 DQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQRKEFPNDQ 121
Query: 129 VKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
VKKYFVTSY CLKSQ+VDL AEGYWEEL+DT RPDI VKDWFAAR DCG YQL VQL
Sbjct: 122 VKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAARPDCGSKYQLCVQLL 181
Query: 189 SADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGP 248
S+ + L +F+P P TIQQ ++A W EVS+TFS+YP GVRYI FQHGG DT YWAGWYGP
Sbjct: 182 SSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQHGGVDTHYWAGWYGP 241
Query: 249 RVTNSSIVVSPKM 261
RVTNSSI + P +
Sbjct: 242 RVTNSSITIGPPL 254
>gi|62388868 F-box protein 44 isoform 1 [Homo sapiens]
Length = 255
Score = 405 bits (1042), Expect = e-113
Identities = 190/253 (75%), Positives = 210/253 (83%)
Query: 9 ALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGFITKDW 68
A+ +INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDL+TLWKRKCLREGFIT+DW
Sbjct: 2 AVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREGFITEDW 61
Query: 69 DQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPK 128
DQPVADWKIFYFLRSLHRNLL NPCAEE W +D NGGD WKVE L +FP+ +
Sbjct: 62 DQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQRKEFPNDQ 121
Query: 129 VKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
VKKYFVTSY CLKSQ+VDL AEGYWEEL+DT RPDI VKDWFAAR DCG YQL VQL
Sbjct: 122 VKKYFVTSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAARPDCGSKYQLCVQLL 181
Query: 189 SADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGP 248
S+ + L +F+P P TIQQ ++A W EVS+TFS+YP GVRYI FQHGG DT YWAGWYGP
Sbjct: 182 SSAHAPLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQHGGVDTHYWAGWYGP 241
Query: 249 RVTNSSIVVSPKM 261
RVTNSSI + P +
Sbjct: 242 RVTNSSITIGPPL 254
>gi|15812198 F-box only protein 2 [Homo sapiens]
Length = 296
Score = 264 bits (674), Expect = 8e-71
Identities = 128/255 (50%), Positives = 170/255 (66%), Gaps = 3/255 (1%)
Query: 8 AALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGFITKD 67
AA ++ELPE +LL + +PA +L+ CRLVC W++L+D LW KC +EG + +
Sbjct: 42 AAAAYLDELPEPLLLRVLAALPAAELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEG 101
Query: 68 WDQPVAD-WKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAHGTDFP- 125
+ D W+ FYFL RNLLRNPC EED+ W +GGD W+VE LPG G +F
Sbjct: 102 GVEEERDHWQQFYFLSKRRRNLLRNPCGEEDLEGWCDVEHGGDGWRVEELPGDSGVEFTH 161
Query: 126 DPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKV 185
D VKKYF +S+E C K+Q++DL AEGYWEELLDT +P IVVKDW++ R+D GC Y+L V
Sbjct: 162 DESVKKYFASSFEWCRKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRSDAGCLYELTV 221
Query: 186 QLASADYFVLASFEPPPVTI-QQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQYWAG 244
+L S VLA F V + Q + W E+S+TF+DY GVR++ F+HGG+D+ YW G
Sbjct: 222 KLLSEHENVLAEFSSGQVAVPQDSDGGGWMEISHTFTDYGPGVRFVRFEHGGQDSVYWKG 281
Query: 245 WYGPRVTNSSIVVSP 259
W+G RVTNSS+ V P
Sbjct: 282 WFGARVTNSSVWVEP 296
>gi|34878749 F-box protein 44 isoform 2 [Homo sapiens]
Length = 224
Score = 209 bits (532), Expect = 2e-54
Identities = 96/122 (78%), Positives = 105/122 (86%)
Query: 9 ALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGFITKDW 68
A+ +INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDL+TLWKRKCLREGFIT+DW
Sbjct: 2 AVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREGFITEDW 61
Query: 69 DQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPK 128
DQPVADWKIFYFLRSLHRNLL NPCAEE W +D NGGD WKVE L +FP+ +
Sbjct: 62 DQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQRKEFPNDQ 121
Query: 129 VK 130
V+
Sbjct: 122 VR 123
>gi|34878753 F-box protein 44 isoform 2 [Homo sapiens]
Length = 224
Score = 209 bits (532), Expect = 2e-54
Identities = 96/122 (78%), Positives = 105/122 (86%)
Query: 9 ALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGFITKDW 68
A+ +INELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDL+TLWKRKCLREGFIT+DW
Sbjct: 2 AVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREGFITEDW 61
Query: 69 DQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPK 128
DQPVADWKIFYFLRSLHRNLL NPCAEE W +D NGGD WKVE L +FP+ +
Sbjct: 62 DQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQRKEFPNDQ 121
Query: 129 VK 130
V+
Sbjct: 122 VR 123
>gi|30520327 F-box protein 27 [Homo sapiens]
Length = 283
Score = 199 bits (505), Expect = 3e-51
Identities = 111/272 (40%), Positives = 152/272 (55%), Gaps = 19/272 (6%)
Query: 4 PHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGF 63
P + ALD +++LP +LL + +HVP R LL CR VC WR L+D LW R+
Sbjct: 18 PEPEEALD-LSQLPPELLLVVLSHVPPRTLLGRCRQVCRGWRALVDGQALWLLILARDHG 76
Query: 64 IT--------KDWDQPVADWKI-----FYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDR 110
T + P + + F R + RNL+RNPC +E + W + +GGD
Sbjct: 77 ATGRALLHLARSCQSPARNARPCPLGRFCARRPIGRNLIRNPCGQEGLRKWMVQ-HGGDG 135
Query: 111 WKVESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDW 170
W VE + T P + FVTS+ C K Q++DL EG W ELLD+ R +I V DW
Sbjct: 136 WVVEE----NRTTVPGAPSQTCFVTSFSWCCKKQVLDLEEEGLWPELLDSGRIEICVSDW 191
Query: 171 FAARADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYI 230
+ AR D GC Y+L VQL A+ VL F P I QWNN V++ FS+ GVR++
Sbjct: 192 WGARHDSGCMYRLLVQLLDANQTVLDKFSAVPDPIPQWNNNACLHVTHVFSNIKMGVRFV 251
Query: 231 LFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMT 262
F+H G+DTQ+WAG YG RVTNSS++V +++
Sbjct: 252 SFEHRGQDTQFWAGHYGARVTNSSVIVRVRLS 283
>gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens]
Length = 287
Score = 174 bits (441), Expect = 8e-44
Identities = 91/269 (33%), Positives = 145/269 (53%), Gaps = 25/269 (9%)
Query: 12 SINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLW----------------- 54
+++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 26 ALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYA 85
Query: 55 -KRKCLREGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKV 113
++CL +++ P+ + RNL+ N C E+ W+++ +GG+ W +
Sbjct: 86 VAQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAI 142
Query: 114 ESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAA 173
E + T P + FVTS+E C K QLVDLV EG W+ELLD+ + +I V DW+ A
Sbjct: 143 EK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGA 198
Query: 174 RADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQ 233
R +CGC YQL+V+L + F P + QW +VS+ F+++ +G+RY+ F+
Sbjct: 199 RENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFE 258
Query: 234 HGGRDTQYWAGWYGPRVTNSSIVVSPKMT 262
GRD W G YG VT+SS+ V +++
Sbjct: 259 QYGRDVSSWVGHYGALVTHSSVRVRIRLS 287
>gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens]
Length = 278
Score = 174 bits (441), Expect = 8e-44
Identities = 91/269 (33%), Positives = 145/269 (53%), Gaps = 25/269 (9%)
Query: 12 SINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLW----------------- 54
+++ LP +L+++ +HVP R L+ CR VC WRD++D T+W
Sbjct: 17 ALDALPPELLVQVLSHVPPRSLVTRCRPVCRAWRDIVDGPTVWLLQLARDRSAEGRALYA 76
Query: 55 -KRKCLREGFITKDWDQPVADWKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKV 113
++CL +++ P+ + RNL+ N C E+ W+++ +GG+ W +
Sbjct: 77 VAQRCLPSNEDKEEF--PLCALARYCLRAPFGRNLIFNSCGEQGFRGWEVE-HGGNGWAI 133
Query: 114 ESLPGAHGTDFPDPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAA 173
E + T P + FVTS+E C K QLVDLV EG W+ELLD+ + +I V DW+ A
Sbjct: 134 EK----NLTPVPGAPSQTCFVTSFEWCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGA 189
Query: 174 RADCGCTYQLKVQLASADYFVLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQ 233
R +CGC YQL+V+L + F P + QW +VS+ F+++ +G+RY+ F+
Sbjct: 190 RENCGCVYQLRVRLLDVYEKEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFE 249
Query: 234 HGGRDTQYWAGWYGPRVTNSSIVVSPKMT 262
GRD W G YG VT+SS+ V +++
Sbjct: 250 QYGRDVSSWVGHYGALVTHSSVRVRIRLS 278
>gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog
[Homo sapiens]
Length = 275
Score = 95.5 bits (236), Expect = 5e-20
Identities = 65/184 (35%), Positives = 89/184 (48%), Gaps = 5/184 (2%)
Query: 75 WKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFV 134
WK+ R L+RNLLR+P E G + +E+L G K+++
Sbjct: 92 WKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQRPLETLGNFRGWYIRTEKLQQ--- 148
Query: 135 TSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASAD-YF 193
+ +K Q VDL+AEG WEELLD +P I V DWF C Y+L V L +AD
Sbjct: 149 -NQSWTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRT 207
Query: 194 VLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNS 253
V+A P T + W +VS+ F Y GVR+I F H ++ G RVT+S
Sbjct: 208 VIAQHHVAPRTSGRGPPGRWVQVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTDS 267
Query: 254 SIVV 257
S+ V
Sbjct: 268 SVSV 271
>gi|27312027 F-box only protein 16 [Homo sapiens]
Length = 292
Score = 40.8 bits (94), Expect = 0.001
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 9 ALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGFITKDW 68
ALD +LP + L +F+ + R L C VC W++L +L LW KCLR +
Sbjct: 85 ALDFTTKLPRVLSLYIFSFLDPRSLC-RCAQVCWHWKNLAELDQLWMLKCLRFNWYINFS 143
Query: 69 DQPVAD--WKIFY--FLRSLHRNLLRNP 92
P WK Y ++ LH + P
Sbjct: 144 PTPFEQGIWKKHYIQMVKELHITKPKTP 171
>gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo
sapiens]
Length = 1094
Score = 40.0 bits (92), Expect = 0.002
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 9 ALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLID--LMTLWKR 56
AL I LP +L +F +P L N LVC LWR++I L WK+
Sbjct: 259 ALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKK 308
>gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo
sapiens]
Length = 1043
Score = 40.0 bits (92), Expect = 0.002
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 9 ALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLID--LMTLWKR 56
AL I LP +L +F +P L N LVC LWR++I L WK+
Sbjct: 208 ALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKK 257
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo
sapiens]
Length = 326
Score = 39.3 bits (90), Expect = 0.004
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 15 ELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWK 55
ELP+++LLE+F+++P R + R VC W+ L+D LW+
Sbjct: 6 ELPDSVLLEIFSYLPVRDRIRISR-VCHRWKRLVDDRWLWR 45
>gi|83035136 F-box protein 31 [Homo sapiens]
Length = 539
Score = 37.0 bits (84), Expect = 0.021
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 12 SINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLRE 61
S+ ELP +L+E+F +P L + VC+ +R ++ T+W+R+C E
Sbjct: 66 SLLELPPELLVEIFASLPGTDLP-SLAQVCTKFRRILHTDTIWRRRCREE 114
>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
sapiens]
Length = 589
Score = 33.1 bits (74), Expect = 0.30
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 11 DSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREG 62
D I+ LP+ + L + + + + LL + C WR L + LW+ KC EG
Sbjct: 161 DFISLLPKELALYVLSFLEPKDLLQAAQ-TCRYWRILAEDNLLWREKCKEEG 211
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 33.1 bits (74), Expect = 0.30
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 11 DSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREG 62
D I+ LP+ + L + + + + LL + C WR L + LW+ KC EG
Sbjct: 279 DFISLLPKELALYVLSFLEPKDLLQAAQ-TCRYWRILAEDNLLWREKCKEEG 329
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 33.1 bits (74), Expect = 0.30
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 11 DSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREG 62
D I+ LP+ + L + + + + LL + C WR L + LW+ KC EG
Sbjct: 199 DFISLLPKELALYVLSFLEPKDLLQAAQ-TCRYWRILAEDNLLWREKCKEEG 249
>gi|30795121 F-box and WD repeat domain containing 8 isoform 2 [Homo
sapiens]
Length = 532
Score = 33.1 bits (74), Expect = 0.30
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 15 ELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGFITKDWDQPVAD 74
+LP + + +F ++ ++L C V W+ + + LW R C +EG + +
Sbjct: 52 QLPYELAINIFQYLDRKELG-RCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSC 110
Query: 75 WKIFY 79
WK+ +
Sbjct: 111 WKLIF 115
>gi|30795123 F-box and WD repeat domain containing 8 isoform 1 [Homo
sapiens]
Length = 598
Score = 33.1 bits (74), Expect = 0.30
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 15 ELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKCLREGFITKDWDQPVAD 74
+LP + + +F ++ ++L C V W+ + + LW R C +EG + +
Sbjct: 118 QLPYELAINIFQYLDRKELG-RCAQVSKTWKVIAEDEVLWYRLCQQEGHLPDSSISDYSC 176
Query: 75 WKIFY 79
WK+ +
Sbjct: 177 WKLIF 181
>gi|124248558 F-box and WD-40 domain protein 9 [Homo sapiens]
Length = 458
Score = 33.1 bits (74), Expect = 0.30
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 4 PHSKAALDSINE-----LPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKRKC 58
P + + + +++E LP +LLE+ +++ AR +L VC RDL+ W+ +
Sbjct: 65 PRAASRVSAVSEPGLLSLPPELLLEICSYLDARLVLHVLSRVCHALRDLVSDHVTWRLRA 124
Query: 59 LR 60
LR
Sbjct: 125 LR 126
>gi|148922963 F-box and leucine-rich repeat protein 21 [Homo
sapiens]
Length = 434
Score = 29.6 bits (65), Expect = 3.3
Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 1 MDAPHSKAALDSINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLMTLWKR 56
++ H+ L LP +++L++F ++P VC W ++ + LW++
Sbjct: 30 LNQTHTHTVLLDWGSLPHHVVLQIFQYLPLLDRAC-ASSVCRRWNEVFHISDLWRK 84
>gi|153792756 hypothetical protein LOC196951 [Homo sapiens]
Length = 508
Score = 29.6 bits (65), Expect = 3.3
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 16/160 (10%)
Query: 126 DPKVKKYFVTSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAAR-ADCGCTYQLK 184
D +V K + T + L + L+ + +W L FRPD +D R ++ T +
Sbjct: 182 DERVFKIWKTHF---LSEASIALLHDSFWWWFLHKFRPDRENQDCLFDRISESYVTLFMS 238
Query: 185 VQLASADYFVLASFEPPPVTIQQWNNATWTEV----SYTFSDYPR---GVRYILFQHGGR 237
+ L+ D F F+ P + Q AT+ E SY F+D + G L+ G +
Sbjct: 239 IPLSRKDAF----FQIYPDCLAQAIYATFHEAFPESSYLFNDEFKEDLGNNIFLWCSGLK 294
Query: 238 DTQ-YWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKH 276
+ +W W ++ ++I S K Q+H
Sbjct: 295 PQKGFWIHWKLKELSTTTIHGSKKAPAKSVKERIADSQEH 334
>gi|226442878 ADAMTS-like 5 [Homo sapiens]
Length = 471
Score = 29.3 bits (64), Expect = 4.3
Identities = 19/61 (31%), Positives = 26/61 (42%)
Query: 224 PRGVRYILFQHGGRDTQYWAGWYGPRVTNSSIVVSPKMTRNQASSEAQPGQKHGQEEAAQ 283
P G R+I +H R+ G G V N VVSP T A + + G +E Q
Sbjct: 213 PEGARHIRVEHRSRNHLALMGGDGRYVLNGHWVVSPPGTYEAAGTHVVYTRDTGPQETLQ 272
Query: 284 S 284
+
Sbjct: 273 A 273
>gi|49574498 hypothetical protein LOC118461 isoform 2 [Homo sapiens]
Length = 719
Score = 29.3 bits (64), Expect = 4.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 259 PKMTRNQASSEAQPGQKHGQEEAAQSPYRA 288
P N + QPG+KHG++E++++P A
Sbjct: 199 PAEVSNTHQNSYQPGRKHGEQESSKNPEMA 228
>gi|206597543 hypothetical protein LOC118461 isoform 1 [Homo
sapiens]
Length = 1435
Score = 29.3 bits (64), Expect = 4.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 259 PKMTRNQASSEAQPGQKHGQEEAAQSPYRA 288
P N + QPG+KHG++E++++P A
Sbjct: 199 PAEVSNTHQNSYQPGRKHGEQESSKNPEMA 228
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 28.9 bits (63), Expect = 5.6
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 85 HRNLLRNPCAEEDMFAWQ---IDFNGGDRWKVESLPGAHGTDFPDPKVK 130
H L +E +FAW+ FNGG R + PGAH P VK
Sbjct: 212 HLKLTDKSPQDELVFAWEDVKAMFNGGSRKRALPQPGAHPACHPLSSVK 260
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 28.9 bits (63), Expect = 5.6
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 85 HRNLLRNPCAEEDMFAWQ---IDFNGGDRWKVESLPGAHGTDFPDPKVK 130
H L +E +FAW+ FNGG R + PGAH P VK
Sbjct: 212 HLKLTDKSPQDELVFAWEDVKAMFNGGSRKRALPQPGAHPACHPLSSVK 260
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 28.9 bits (63), Expect = 5.6
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 85 HRNLLRNPCAEEDMFAWQ---IDFNGGDRWKVESLPGAHGTDFPDPKVK 130
H L +E +FAW+ FNGG R + PGAH P VK
Sbjct: 212 HLKLTDKSPQDELVFAWEDVKAMFNGGSRKRALPQPGAHPACHPLSSVK 260
>gi|157426875 F-box and leucine-rich repeat protein 18 [Homo
sapiens]
Length = 718
Score = 28.9 bits (63), Expect = 5.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 18 ENILLELFTHVPARQLLLNCRLVC 41
+ ILL + +HVP+ L+LN R C
Sbjct: 33 DEILLHILSHVPSTDLILNVRRTC 56
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.451
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,422,602
Number of Sequences: 37866
Number of extensions: 548220
Number of successful extensions: 1036
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 991
Number of HSP's gapped (non-prelim): 49
length of query: 293
length of database: 18,247,518
effective HSP length: 101
effective length of query: 192
effective length of database: 14,423,052
effective search space: 2769225984
effective search space used: 2769225984
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.