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Search of human proteins with 89111953
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89111953 transmembrane protein 132B [Homo sapiens]
(1078 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89111953 transmembrane protein 132B [Homo sapiens] 2152 0.0
gi|171460922 transmembrane protein 132D [Homo sapiens] 1064 0.0
gi|209870052 transmembrane protein 132C [Homo sapiens] 966 0.0
gi|46560555 transmembrane protein 132E [Homo sapiens] 516 e-146
gi|30089935 transmembrane protein 132A isoform a [Homo sapiens] 496 e-140
gi|30089937 transmembrane protein 132A isoform b [Homo sapiens] 493 e-139
gi|169205040 PREDICTED: similar to TMEM132B protein [Homo sapiens] 314 3e-85
gi|169205620 PREDICTED: similar to TMEM132B protein [Homo sapiens] 314 3e-85
gi|239744766 PREDICTED: hypothetical protein [Homo sapiens] 314 3e-85
gi|32490557 poly(A) polymerase alpha [Homo sapiens] 35 0.50
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 35 0.50
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 35 0.50
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 35 0.50
gi|156071420 hypothetical protein LOC728912 [Homo sapiens] 33 1.5
gi|119709825 neuroblastoma breakpoint family, member 11-like [Ho... 33 1.5
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 32 2.5
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 32 2.5
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 32 2.5
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 32 2.5
gi|44890068 zinc finger protein 262 [Homo sapiens] 32 2.5
gi|154937342 ring finger protein 190 [Homo sapiens] 32 3.2
gi|154937340 ring finger protein 190 [Homo sapiens] 32 3.2
gi|24429592 chondroitin sulfate N-acetylgalactosaminyltransferas... 32 4.2
gi|150417973 supervillin isoform 2 [Homo sapiens] 32 4.2
gi|31742501 sorting nexin family member 27 [Homo sapiens] 32 4.2
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 32 4.2
gi|105990532 apolipoprotein B precursor [Homo sapiens] 31 5.5
gi|5032055 reticulon 2 isoform A [Homo sapiens] 31 5.5
gi|46255005 reticulon 2 isoform B [Homo sapiens] 31 5.5
gi|5454112 transcription factor Dp-2 (E2F dimerization partner 2... 31 5.5
>gi|89111953 transmembrane protein 132B [Homo sapiens]
Length = 1078
Score = 2152 bits (5576), Expect = 0.0
Identities = 1078/1078 (100%), Positives = 1078/1078 (100%)
Query: 1 MFGAASRMDTTAVCTGGVTESRGIVDSLQKFSSLPAYLPTNLHISNAEESFFLKEANQDL 60
MFGAASRMDTTAVCTGGVTESRGIVDSLQKFSSLPAYLPTNLHISNAEESFFLKEANQDL
Sbjct: 1 MFGAASRMDTTAVCTGGVTESRGIVDSLQKFSSLPAYLPTNLHISNAEESFFLKEANQDL 60
Query: 61 TRNSSLQARVEPFFIYRARTPPIINASYGPFSVEKIIPQELLLTSTAFGNMDKFPFNWKL 120
TRNSSLQARVEPFFIYRARTPPIINASYGPFSVEKIIPQELLLTSTAFGNMDKFPFNWKL
Sbjct: 61 TRNSSLQARVEPFFIYRARTPPIINASYGPFSVEKIIPQELLLTSTAFGNMDKFPFNWKL 120
Query: 121 KSHILDSSIYSNRPKVQTLFYVTGMGWDDSDLTEDLPCVKMFAFPEAREVAASCRLQGAP 180
KSHILDSSIYSNRPKVQTLFYVTGMGWDDSDLTEDLPCVKMFAFPEAREVAASCRLQGAP
Sbjct: 121 KSHILDSSIYSNRPKVQTLFYVTGMGWDDSDLTEDLPCVKMFAFPEAREVAASCRLQGAP 180
Query: 181 GLCVAELELLPEWFSSGLDLEPEEEIPALLGGTTMELFFTLYPADKAGQCPLEEEGKWEN 240
GLCVAELELLPEWFSSGLDLEPEEEIPALLGGTTMELFFTLYPADKAGQCPLEEEGKWEN
Sbjct: 181 GLCVAELELLPEWFSSGLDLEPEEEIPALLGGTTMELFFTLYPADKAGQCPLEEEGKWEN 240
Query: 241 NIHSGLESPQQAFPARERIGSVVVYPTQDDLKWSLVSLDENVVISVPLNLVREGDTATFL 300
NIHSGLESPQQAFPARERIGSVVVYPTQDDLKWSLVSLDENVVISVPLNLVREGDTATFL
Sbjct: 241 NIHSGLESPQQAFPARERIGSVVVYPTQDDLKWSLVSLDENVVISVPLNLVREGDTATFL 300
Query: 301 VSLTSSSVADQFTLRIKAAAGVKITAVRVSSEDQWAVQEEIDNGSTQTSATLTCMGHRPD 360
VSLTSSSVADQFTLRIKAAAGVKITAVRVSSEDQWAVQEEIDNGSTQTSATLTCMGHRPD
Sbjct: 301 VSLTSSSVADQFTLRIKAAAGVKITAVRVSSEDQWAVQEEIDNGSTQTSATLTCMGHRPD 360
Query: 361 TQSRVNGSFYEILQVDFGIDNSSDLAGAQQITWQVEYPIEDSMSELVVSEIFVSQTTFVG 420
TQSRVNGSFYEILQVDFGIDNSSDLAGAQQITWQVEYPIEDSMSELVVSEIFVSQTTFVG
Sbjct: 361 TQSRVNGSFYEILQVDFGIDNSSDLAGAQQITWQVEYPIEDSMSELVVSEIFVSQTTFVG 420
Query: 421 IVPLAMDTEVLNTAILTGKPVSVPVKVVGVQEDGSVVDVSESVECKSADEDVIKVSNNCD 480
IVPLAMDTEVLNTAILTGKPVSVPVKVVGVQEDGSVVDVSESVECKSADEDVIKVSNNCD
Sbjct: 421 IVPLAMDTEVLNTAILTGKPVSVPVKVVGVQEDGSVVDVSESVECKSADEDVIKVSNNCD 480
Query: 481 SIFVNGKEMKSKVDTIVNFTHQHFTSQFEVTVWAPRLPLQIEISDTELSQIKGWRIPVAA 540
SIFVNGKEMKSKVDTIVNFTHQHFTSQFEVTVWAPRLPLQIEISDTELSQIKGWRIPVAA
Sbjct: 481 SIFVNGKEMKSKVDTIVNFTHQHFTSQFEVTVWAPRLPLQIEISDTELSQIKGWRIPVAA 540
Query: 541 NRRPTRESDDEDDEEKKGRGCSLQYQHATVRVLTQFVAESPDLGQLTYMLGPDWQFDITD 600
NRRPTRESDDEDDEEKKGRGCSLQYQHATVRVLTQFVAESPDLGQLTYMLGPDWQFDITD
Sbjct: 541 NRRPTRESDDEDDEEKKGRGCSLQYQHATVRVLTQFVAESPDLGQLTYMLGPDWQFDITD 600
Query: 601 LVTEFMKVEEPKIAQLQDGRTLAGREPGITTVQVLSPLSDSILAEKTVIVLDDRVTIAEL 660
LVTEFMKVEEPKIAQLQDGRTLAGREPGITTVQVLSPLSDSILAEKTVIVLDDRVTIAEL
Sbjct: 601 LVTEFMKVEEPKIAQLQDGRTLAGREPGITTVQVLSPLSDSILAEKTVIVLDDRVTIAEL 660
Query: 661 GVQLVAGMSLSLQPHRADKRAIVSTAAALDVLQSPQQEAIVSSWILFSDGSVTPLDIYDP 720
GVQLVAGMSLSLQPHRADKRAIVSTAAALDVLQSPQQEAIVSSWILFSDGSVTPLDIYDP
Sbjct: 661 GVQLVAGMSLSLQPHRADKRAIVSTAAALDVLQSPQQEAIVSSWILFSDGSVTPLDIYDP 720
Query: 721 KDYSVTVSSLDEMVVSVQANLESKWPIVVAEGEGQGPLIKLEMMISEPCQKTKRKSVLAV 780
KDYSVTVSSLDEMVVSVQANLESKWPIVVAEGEGQGPLIKLEMMISEPCQKTKRKSVLAV
Sbjct: 721 KDYSVTVSSLDEMVVSVQANLESKWPIVVAEGEGQGPLIKLEMMISEPCQKTKRKSVLAV 780
Query: 781 GKGNVKVKFEPSSDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQ 840
GKGNVKVKFEPSSDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQ
Sbjct: 781 GKGNVKVKFEPSSDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQ 840
Query: 841 EESTNKSTTPQSPMEGKNKLLKSGGPDAFTSFPTQGKSPDPNNPSDLTVTSRGLTDLEIG 900
EESTNKSTTPQSPMEGKNKLLKSGGPDAFTSFPTQGKSPDPNNPSDLTVTSRGLTDLEIG
Sbjct: 841 EESTNKSTTPQSPMEGKNKLLKSGGPDAFTSFPTQGKSPDPNNPSDLTVTSRGLTDLEIG 900
Query: 901 MYALLCVFCLAILVFLINCVAFAWKYRHKRFAVSEQGNIPHSHDWVWLGNEVELLENPVD 960
MYALLCVFCLAILVFLINCVAFAWKYRHKRFAVSEQGNIPHSHDWVWLGNEVELLENPVD
Sbjct: 901 MYALLCVFCLAILVFLINCVAFAWKYRHKRFAVSEQGNIPHSHDWVWLGNEVELLENPVD 960
Query: 961 ITLPSEECTTMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSDYVYEKEIKNEPMNSSGPK 1020
ITLPSEECTTMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSDYVYEKEIKNEPMNSSGPK
Sbjct: 961 ITLPSEECTTMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSDYVYEKEIKNEPMNSSGPK 1020
Query: 1021 RKRVKFTSYTTILPEDGGPYTNSILFDSDDNIKWVCQDMGLGDSQDFRDYMESLQDQM 1078
RKRVKFTSYTTILPEDGGPYTNSILFDSDDNIKWVCQDMGLGDSQDFRDYMESLQDQM
Sbjct: 1021 RKRVKFTSYTTILPEDGGPYTNSILFDSDDNIKWVCQDMGLGDSQDFRDYMESLQDQM 1078
>gi|171460922 transmembrane protein 132D [Homo sapiens]
Length = 1099
Score = 1064 bits (2752), Expect = 0.0
Identities = 549/1075 (51%), Positives = 737/1075 (68%), Gaps = 16/1075 (1%)
Query: 18 VTESRGIVDSLQKFSSLPAYLPTNLHISNAEESFFLKEANQDLTRNSSLQARVEPFFIYR 77
VTE RGI++S+Q+FS LP YLP HI+NA+ SFFLKEANQD+ RNSSLQ+RVE F IY+
Sbjct: 27 VTEGRGILESIQRFSLLPTYLPVTYHINNADVSFFLKEANQDIMRNSSLQSRVESFLIYK 86
Query: 78 ARTPPIINASYGPFSVEKIIPQELLLTSTAFGNMDKFPFNWKLKSHILDSSIYSNRPKVQ 137
+R P++NASYGPFS+E+++PQ+L+L S FG +KF NWKLK+HIL +Y +RPKVQ
Sbjct: 87 SRRLPVLNASYGPFSIEQVVPQDLMLPSNPFGFTNKFSLNWKLKAHILRDKVYLSRPKVQ 146
Query: 138 TLFYVTGMGWDDSDLTEDLPCVKMFAFPEAREVAASCRLQGAPGLCVAELELLPEWFSSG 197
LF++ G WDD E LPC+++FAF E REV SCRLQG GLCVAELELL WFS
Sbjct: 147 VLFHIMGRDWDDRSAGEKLPCLRVFAFRETREVRGSCRLQGDLGLCVAELELLSSWFSPP 206
Query: 198 LDLEPEEEIPALLGGTTMELFFTLYPADKAGQCPLEEEGKWENNIHSGLESPQQAFPARE 257
+ + GT +EL++T++P + G C + E+ + N I +G ++ P +
Sbjct: 207 TVVAGRRKSVDQPEGTPVELYYTVHPGGERGDC-VREDARRSNGIRTGHSDIDESGPPLQ 265
Query: 258 RIGSVVVYPTQDDLKWSLVSLDENVVISVPLNLVREGDTATFLVSLTSSSVADQFTLRIK 317
RIGS+ +Y T + LD +V I VR+GD TF VS++ +S D+FTLR K
Sbjct: 266 RIGSIFLYQTHRKPSLRELRLDNSVAIHYIPKTVRKGDVLTFPVSISRNSTEDRFTLRAK 325
Query: 318 AAAGVKITAVRVSSEDQWAVQEEIDNGSTQTSATLTCMGHRPDTQSRVNGSFYEILQVDF 377
GV I VR SS W V+E D A + C +++ +G+ YE++Q+D
Sbjct: 326 VKKGVNIIGVRASSPSIWDVKERTDYTGKYAPAVIVCQKKAAGSENSADGASYEVMQIDV 385
Query: 378 GIDNSSDLAGAQQITWQVEYPIEDSMSELVVSEIFVSQTTFVGIVPLAMDTEVLNTAILT 437
++ DL Q +TWQVEYP E + S+L VS+I+VS +G+VPLAM+ E+LNTAILT
Sbjct: 386 EVEEPGDLPATQLVTWQVEYPGEIT-SDLGVSKIYVSPKDLIGVVPLAMEAEILNTAILT 444
Query: 438 GKPVSVPVKVVGVQEDGSVVDVSESVECKSADEDVIKVSNNCDSIFVNGKEMKSKVDTIV 497
GK V+VPVKVV V++DG+V ++ ESVEC+S+DEDVIKVS+ CD +FVNGKEMK KV+ +V
Sbjct: 445 GKTVAVPVKVVSVEDDGTVTELLESVECRSSDEDVIKVSDRCDYVFVNGKEMKGKVNVVV 504
Query: 498 NFTHQHFTSQFEVTVWAPRLPLQIEISDTELSQIKGWRIPVAANRRPTRESDDEDDEEKK 557
NFT+QH +S E+TVW PRLPLQIE+SDTEL+QIKGWR+P+ ++RRP +S++E+D+E++
Sbjct: 505 NFTYQHLSSPLEMTVWVPRLPLQIEVSDTELNQIKGWRVPIVSSRRPAGDSEEEEDDERR 564
Query: 558 GRGCSLQYQHATVRVLTQFVAESPDLG-QLTYMLGPDWQFDITDLVTEFMKVEEPKIAQL 616
GRGC+LQYQHA VRVLTQFVAE+ G L ++LG DWQ DIT+L+ +FM+VEEP+IA+L
Sbjct: 565 GRGCTLQYQHAMVRVLTQFVAEAAGPGGHLAHLLGSDWQVDITELINDFMQVEEPRIAKL 624
Query: 617 QDGRTLAGREPGITTVQVLSPLSDSILAEKTVIVLDDRVTIAELGVQLVAGMSLSLQPHR 676
Q G+ L G+E G+TT+Q+LSPLSD+ILAEKT+ VLD++VTI +LGVQLV G+SLSLQ
Sbjct: 625 QGGQILMGQELGMTTIQILSPLSDTILAEKTITVLDEKVTITDLGVQLVTGLSLSLQLSP 684
Query: 677 ADKRAIVSTAAALDVLQSPQQEAIVSSWILFSDGSVTPLDIYDPKDYSVTVSSLDEMVVS 736
RAI +TA A ++LQ P+QEA +S W+ FSDGSVTPLDIYD KD+S+ +SLDE VVS
Sbjct: 685 GSNRAIFATAVAQELLQRPKQEAAISCWVQFSDGSVTPLDIYDGKDFSLMATSLDEKVVS 744
Query: 737 VQANLESKWPIVVAEGEGQGPLIKLEMMISEPCQKTKRKSVLAVGKGNVKVKFEPSSDEH 796
+ + + KWPI+ AE EGQG L+K+EM+ISE CQK+KRKSVLAVG N+KVKF +
Sbjct: 745 IHQDPKFKWPIIAAETEGQGTLVKVEMVISESCQKSKRKSVLAVGTANIKVKFGQNDANP 804
Query: 797 QGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQEESTNKSTTPQSPME- 855
+ G ++++S+ ++ +QE QE + G+ +TT +S ++
Sbjct: 805 NTSDSRHTGAGVHMENNVSDRRPKKPSQEWGSQEGQYYGSSSMGLMEGRGTTTDRSILQK 864
Query: 856 --GKNKLLKSGG-----PDAFTSFPTQGKSPDPN---NPSDLTVTSRGLTDLEIGMYALL 905
G+ LL P TSFP Q P N + +DL S+GL+DLEIGMYALL
Sbjct: 865 KKGQESLLDDNSHLQTIPSDLTSFPAQVDLPRSNGEMDGNDLMQASKGLSDLEIGMYALL 924
Query: 906 CVFCLAILVFLINCVAFAWKYRHKRFAVSEQGNIPHSHDWVWLGNEVELLENPVDITLPS 965
VFCLAILVFLINCV FA KYRHK+ EQ + HSHDWV L N ELLEN ++
Sbjct: 925 GVFCLAILVFLINCVTFALKYRHKQVPFEEQEGMSHSHDWVGLSNRTELLENHINFASSQ 984
Query: 966 EECTTMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSD--YVYEKEIKNEPMNSSGPKRKR 1023
+E T IDRG+ FEE +LL+ +SQK+ + QL +P + K+ K+EP S KRKR
Sbjct: 985 DEQITAIDRGMDFEESKYLLSTNSQKSINGQLFKPLGPIIIDGKDQKSEPPTSPTSKRKR 1044
Query: 1024 VKFTSYTTILPEDGGPYTNSILFDSDDNIKWVCQDMGLGDSQDFRDYMESLQDQM 1078
VKFT++T + +D P NSI+ S+D+IKWVCQD+ GD ++ +YME L + +
Sbjct: 1045 VKFTTFTAVSSDDEYPTRNSIVMSSEDDIKWVCQDLDPGDCKELHNYMERLHENV 1099
>gi|209870052 transmembrane protein 132C [Homo sapiens]
Length = 996
Score = 966 bits (2498), Expect = 0.0
Identities = 510/1004 (50%), Positives = 691/1004 (68%), Gaps = 37/1004 (3%)
Query: 102 LLTSTAFGNMDKFPFNWKLKSHILDSSIYSNRPKVQTLFYVTGMGWDDSDLTEDLPCVKM 161
+LTS G +KF F+WKLK+HIL +Y +RPKVQ LF++ G WDD E LPC+++
Sbjct: 1 MLTSNFLGPTNKFSFDWKLKAHILRDKVYLSRPKVQVLFHIMGRDWDDHGAGEKLPCLRV 60
Query: 162 FAFPEAREVAASCRLQGAPGLCVAELELLPEWFSS---GLDLEPEEEIPALLGGTTMELF 218
FAF E REV SCRL+G GLCVAELELL WFS+ G + + P GT +EL+
Sbjct: 61 FAFRETREVRGSCRLKGDLGLCVAELELLSSWFSAPTVGAGRKKSMDQPE---GTPVELY 117
Query: 219 FTLYPADKAGQCPLEEEGKWENNIHSGLESPQQAFPARERIGSVVVYPTQDDLKWSLVSL 278
+T++P ++ G C + K N I G + ++ +RIG+V +Y QD + S + L
Sbjct: 118 YTVHPGNERGDCAGGDFRKG-NAIRPGKDGLEETTSHLQRIGTVGLYRAQDSAQLSELRL 176
Query: 279 DENVVISVPLNLVREGDTATFLVSLTSSSVADQFTLRIKAAAGVKITAVRVSSEDQWAVQ 338
D NVVI +P V++G+ T V+++S+S D F LR K GV I + + QW V+
Sbjct: 177 DGNVVIWLPSRPVKQGEVVTAYVTISSNSSVDLFILRAKVKKGVNILSAQTREPRQWGVK 236
Query: 339 EEIDNGSTQTSATLTCMGHRPDTQSRVNGSFYEILQVDFGIDNSSDLAGAQQITWQVEYP 398
+E+ +G +AT+ C P ++R + F E++Q++F I + S L+G Q ITWQVEYP
Sbjct: 237 QEVGSGGKHVTATVACQRLGPSPRNRSSSLFNEVVQMNFEIASFSSLSGTQPITWQVEYP 296
Query: 399 IEDSMSELVVSEIFVSQTTFVGIVPLAMDTEVLNTAILTGKPVSVPVKVVGVQEDGSVVD 458
+ + +++ VSEIFVSQ VGIVPLAMDTE+LNTA+LTGK V++P+KVV V+E+ +V+D
Sbjct: 297 RKGT-TDIAVSEIFVSQKDLVGIVPLAMDTEILNTAVLTGKTVAMPIKVVSVEENSAVMD 355
Query: 459 VSESVECKSADEDVIKVSNNCDSIFVNGKEMKSKVDTIVNFTHQHFTSQFEVTVWAPRLP 518
+SESVECKS DEDVIKVS CD IFVNGKE+K K+D +VNFT+Q+ ++ VTVW PRLP
Sbjct: 356 ISESVECKSTDEDVIKVSERCDYIFVNGKEIKGKMDAVVNFTYQYLSAPLCVTVWVPRLP 415
Query: 519 LQIEISDTELSQIKGWRIPVAANRRPTRESDDEDDEEKKGRGCSLQYQHATVRVLTQFVA 578
LQIE+SDTELSQIKGWR+P+ N+RPTRES+DED+EE++GRGC+LQYQHATVRVLTQFV+
Sbjct: 416 LQIEVSDTELSQIKGWRVPIVTNKRPTRESEDEDEEERRGRGCALQYQHATVRVLTQFVS 475
Query: 579 E-SPDLGQLTYMLGPDWQFDITDLVTEFMKVEEPKIAQLQDGRTLAGREPGITTVQVLSP 637
E + GQ Y+L P+WQFDIT LV +FMK+EEP +A LQD R L GRE G+TT+QVLSP
Sbjct: 476 EGAGPWGQPNYLLSPNWQFDITHLVADFMKLEEPHVATLQDSRVLVGREVGMTTIQVLSP 535
Query: 638 LSDSILAEKTVIVLDDRVTIAELGVQLVAGMSLSLQPHRADKRAIVSTAAALDVLQSPQQ 697
LSDSILAEKT+ VLDD+V++ +L +QLVAG+S++L P+ + +A+ + A +VL++P+Q
Sbjct: 536 LSDSILAEKTITVLDDKVSVTDLAIQLVAGLSVALYPNAENSKAVTAVVTAEEVLRTPKQ 595
Query: 698 EAIVSSWILFSDGSVTPLDIYDPKDYSVTVSSLDEMVVSVQANLESKWPIVVAEGEGQGP 757
EA+ S+W+ FSDGSVTPLDIYD KD+S+ +S DE VVSV +WP+VVAEGEGQGP
Sbjct: 596 EAVFSTWLQFSDGSVTPLDIYDTKDFSLAATSQDEAVVSVPQPRSPRWPVVVAEGEGQGP 655
Query: 758 LIKLEMMISEPCQKTKRKSVLAVGKGNVKVKF-EPSSDEHQGGSNDIEGINREYKDHLSN 816
LI+++M I+E CQK+KRKS+LAVG GNV+VKF + +D GG + + E K+H S+
Sbjct: 656 LIRVDMTIAEACQKSKRKSILAVGVGNVRVKFGQNDADSSPGGDYEED----EIKNHASD 711
Query: 817 SIEREGNQERAVQE-WFHRGTPVGQEESTNKSTTPQSPMEGKNKLLKS----GG------ 865
++ + ER Q+ + +PV +EE + T + NK++K+ GG
Sbjct: 712 RRQKGQHHERTGQDGHLYGSSPVEREEGALRRATTTARSLLDNKVVKNSRADGGRLAGEG 771
Query: 866 -----PDAFTSFPTQGKSPDPNN---PSDLTVTSRGLTDLEIGMYALLCVFCLAILVFLI 917
P FT+FP P + +DL T RGL+DLEIGMYALL VFCLAILVFLI
Sbjct: 772 QLQNIPIDFTNFPAHVDLPKAGSGLEENDLVQTPRGLSDLEIGMYALLGVFCLAILVFLI 831
Query: 918 NCVAFAWKYRHKRFAVSEQGNIPHSHDWVWLGNEVELLENPVDITLPSEECTTMIDR--G 975
NC FA KYRHK+ + Q ++ HSHDWVWLGNE ELLE+ D P +E TT+IDR G
Sbjct: 832 NCATFALKYRHKQVPLEGQASMTHSHDWVWLGNEAELLESMGDAPPPQDEHTTIIDRGPG 891
Query: 976 LQFEERNFLLNGSSQKTFHSQLLRPSDY--VYEKEIKNEPMNSSGPKRKRVKFTSYTTIL 1033
E + LLNG S K SQ+ R +D +E K +P++S KRK+VKFT++TTI
Sbjct: 892 ACEESNHLLLNGGSHKHVQSQIHRSADSGGRQGREQKQDPLHSPTSKRKKVKFTTFTTIP 951
Query: 1034 PEDGGPYTNSILFDSDDNIKWVCQDMGLGDSQDFRDYMESLQDQ 1077
P+D P NSI+ +D++IKWVCQD+ +G ++ R+Y+E L+D+
Sbjct: 952 PDDSCPTVNSIVSSNDEDIKWVCQDVAVGAPKELRNYLEKLKDK 995
>gi|46560555 transmembrane protein 132E [Homo sapiens]
Length = 984
Score = 516 bits (1330), Expect = e-146
Identities = 315/848 (37%), Positives = 482/848 (56%), Gaps = 74/848 (8%)
Query: 258 RIGSVVVYPTQDDLKWSLVSLDENVVISVPLNLVREGDTATFLVSLT------SSSVADQ 311
RIGS+ ++ LD N++I +P ++ G+ + L+ L SS +
Sbjct: 180 RIGSISLFRPPPRRTLQEHRLDSNLMIRLPDRPLKPGEVLSILLYLAPNSSSPSSPSVEH 239
Query: 312 FTLRIKAAAGVKITAVRVSSEDQWAVQEEIDNGSTQTSATL-TCMGHRPDTQSRVNGSFY 370
FTLR+KA GV + + S QW V E+ G+ ++AT+ R
Sbjct: 240 FTLRVKAKKGVTLLGTK-SRSGQWHVTSELLTGAKHSTATVDVAWAQSTPLPPREGQGPL 298
Query: 371 EILQVDFGIDNSSDLAGAQQITWQVEYPIEDSMSEL--VVSEIFVSQTTFVGIVPLAMDT 428
EILQ+DF ++N + + ++I W ++Y ++ +L V+E+ V Q I+PLAMDT
Sbjct: 299 EILQLDFEMENFTSQSVKRRIMWHIDYRGHGALPDLERAVTELTVIQRDVQAILPLAMDT 358
Query: 429 EVLNTAILTGKPVSVPVKVVGVQEDGSVVDVSESVECKSADEDVIKVSNNCDSIFVNGKE 488
E++NTAILTG+ V++PVKV+ ++ +G V+D+S VEC+S +ED+IKVS++CD +FV+GKE
Sbjct: 359 EIINTAILTGRTVAIPVKVIAIEVNGLVLDISALVECESDNEDIIKVSSSCDYVFVSGKE 418
Query: 489 MKSKVDTIVNFTHQHFTSQFEVTVWAPRLPLQIEISDTELSQIKGWRIPVAANRRPTRES 548
+ ++ V F + + E+TVW P+LPL IE+SD LSQ+KGWR+P+ +RR RES
Sbjct: 419 SRGSMNARVTFRYDVLNAPLEMTVWVPKLPLHIELSDARLSQVKGWRVPILPDRRSVRES 478
Query: 549 DDEDDEEKK-----GRGCSLQYQHATVRVLTQF-VAESPDLGQLTYMLGPDWQFDITDLV 602
+DED+EE++ RGC+LQYQHAT++V TQF S Q+ MLGPDW ++TDLV
Sbjct: 479 EDEDEEEEERRQSASRGCTLQYQHATLQVFTQFHTTSSEGTDQVVTMLGPDWLVEVTDLV 538
Query: 603 TEFMKVEEPKIAQLQDGRTLAGREPGITTVQVLSPLSDSILAEKTVIVLDDRVTIAELGV 662
++FM+V +P++A + D TLAG EPG T +V+SPL++++L E + V +++V+I +L
Sbjct: 539 SDFMRVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPLTEAVLGETLLTVTEEKVSITQLQA 598
Query: 663 QLVAGMSLSLQPHRADKRAIVSTAAALDVLQSPQQEAIVSSWILFSDGSVTPLDIYDPKD 722
Q+VA ++LSL+P I++T AA L +QEA++S W+ +SDG+ PL +Y P+D
Sbjct: 599 QVVASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDGTTAPLSLYSPRD 658
Query: 723 YSVTVSSLDEMVVSVQANLESKWPIVVAEGEGQGPLIKLEMMISEPCQKTKRKSVLAVGK 782
Y + VSSLDE V +V + +P+VVAE EG G L++ E+ I+E CQKTKRKSVLA
Sbjct: 659 YGLLVSSLDEHVATV--TQDRAFPLVVAEAEGSGELLRAELTIAESCQKTKRKSVLATTP 716
Query: 783 GNVKVKFEPSSDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQEE 842
++V F + + + D G ++ P G E+
Sbjct: 717 VGLRVHF---GRDEEDPTYDYPGPSQP--------------------------GPGGGED 747
Query: 843 STNKSTTPQSPMEGKNKLLKSGGPDAFTSF--PTQGKSPDPNNPSDLTVTSRGLTDLEIG 900
+ P S + ++ GP + PT+ P P+ RGLTDLEIG
Sbjct: 748 EARGAGPPGSALPAP----EAPGPGTASPVVPPTEDFLP---LPTGFLQVPRGLTDLEIG 800
Query: 901 MYALLCVFCLAILVFLINCVAFAWKYRHKRFAVSEQGNIPHSHDWVWLGNEVELLENPVD 960
MYALL VFCLAILVFLINC+ F +YRHKR Q ++ HSH WV+LGN + L +
Sbjct: 801 MYALLGVFCLAILVFLINCIVFVLRYRHKRIPPEGQTSMDHSHHWVFLGNG-QPLRVQGE 859
Query: 961 ITLPSEECTTMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSDYV---YEKEIKNEPMNSS 1017
++ P+ + + + +GSSQ + SQ+ D ++ +P +S
Sbjct: 860 LSPPAGNPLETVPAFCHGDHHS---SGSSQTSVQSQVHGRGDGSSGGSARDQAEDPASSP 916
Query: 1018 GPKRKRVKFTSYTTILPEDGGPYTNSILFDSD----DNIKWVCQDMGLGDSQ-----DFR 1068
KRKRVKFT++TT LP + Y + + D +++ W C D+ G ++ D
Sbjct: 917 TSKRKRVKFTTFTT-LPSEELAYDSVPAGEEDEEEEEDLGWGCPDVA-GPTRPTAPPDLH 974
Query: 1069 DYMESLQD 1076
+YM +++
Sbjct: 975 NYMRRIKE 982
Score = 111 bits (278), Expect = 3e-24
Identities = 55/134 (41%), Positives = 85/134 (63%), Gaps = 3/134 (2%)
Query: 38 LPTNLHISNAEESFFLKEAN--QDLTRNSSLQARVEPFFIYRARTPPIINASYGPFSVEK 95
LP + +S+ +FFL+EA NSSLQ R EPF +++ + P++N S GPFS +
Sbjct: 43 LPVSYRLSHTRLAFFLREARPPSPAVANSSLQ-RSEPFVVFQTKELPVLNVSLGPFSTSQ 101
Query: 96 IIPQELLLTSTAFGNMDKFPFNWKLKSHILDSSIYSNRPKVQTLFYVTGMGWDDSDLTED 155
++ +ELL S+ ++ NWK+++ I+ S + +++P VQ LFYV G WDD +TE
Sbjct: 102 VVARELLQPSSTLDIPERLTVNWKVRAFIVRSHVPASQPVVQVLFYVAGRDWDDFGVTER 161
Query: 156 LPCVKMFAFPEARE 169
LPCV++ AF +ARE
Sbjct: 162 LPCVRLHAFRDARE 175
>gi|30089935 transmembrane protein 132A isoform a [Homo sapiens]
Length = 1024
Score = 496 bits (1277), Expect = e-140
Identities = 339/1072 (31%), Positives = 526/1072 (49%), Gaps = 124/1072 (11%)
Query: 35 PAYLPTNLHISNAEESFFLKEANQDLTRNSSLQARVEPFFIYRA--RTPPIINASYGPFS 92
P YLP L + +A E F +++ NSSL +R E F + + R P++ ASY PF+
Sbjct: 43 PVYLPAALELLDAPEHFRVQQVGHYPPANSSLSSRSETFLLLQPWPRAQPLLRASYPPFA 102
Query: 93 VEKIIPQELLLTSTAFGNMDKFPFNWKLKSHILDSSIYSNRPKVQTLFYVTGMGWDDSDL 152
++++P + + P W +++ +++++ P + LF++ G W
Sbjct: 103 TQQVVPPRVT-------EPHQRPVPWDVRAVSVEAAVTPAEPYARVLFHLKGQDWPPG-- 153
Query: 153 TEDLPCVKMFAFPEAREVAASCRLQGAPGLCVAELELLPEWFSSGLDLEPEEEIPALLGG 212
+ LPC ++ A A +CR Q + G CV ELEL WFS
Sbjct: 154 SGSLPCARLHATHPAGTAHQACRFQPSLGACVVELELPSHWFSQA-------------ST 200
Query: 213 TTMELFFTLYPADKA-GQCPLEEEGKWENNIHSGLESPQQAFPARERIGSVVVYPTQDDL 271
T EL +TL PA + G C EE + +QA P +G V + P D
Sbjct: 201 TRAELAYTLEPAAEGPGGCGSGEEN----------DPGEQALP----VGGVELRPA-DPP 245
Query: 272 KWSLVSLDENVVISVPLNLVREGDTATFLVSLTSSSVADQFTLRIKAAAGVKITAVRVSS 331
++ V LDE V + VP VR G + + L + A TLRIK G+ +TA R +
Sbjct: 246 QYQEVPLDEAVTLRVPDMPVRPGQLFSATLLLRHNFTASLLTLRIKVKKGLHVTAARPAQ 305
Query: 332 EDQWAVQEEIDNGSTQTSATLTCMGHR-----PDTQSRVNGSFYEILQVDFGIDNSSD-- 384
W + + GS + +TC HR PD+ S + S E L VDF ++NS+
Sbjct: 306 PTLWTAKLDRFKGSRHHTTLITC--HRAGLTEPDSSSPLELS--EFLWVDFVVENSTGGG 361
Query: 385 LAGAQQITWQVEYPIE--DSMSELVVSEIFVSQTTFVGIVPLAMDTEVLNTAILTGKPVS 442
+A + +TWQ+EYP + ++ + +V EI VS+ ++PLA E++NTA LTG P
Sbjct: 362 VAVTRPVTWQLEYPGQAPEAEKDKMVWEILVSERDIRALIPLAKAEELVNTAPLTGVPQH 421
Query: 443 VPVKVVGVQEDGSVVDVSESVECKSADEDVIKVSNNCDSIFVNGKEMKSKVDTIVNFTHQ 502
VPV++V V G++V+V+E V C+SA+ V++VS CD++FV GKE + V+F +
Sbjct: 422 VPVRLVTVDGGGALVEVTEHVGCESANTQVLQVSEACDAVFVAGKESRGARGVRVDFWWR 481
Query: 503 HFTSQFEVTVWAPRLPLQIEISDTELSQIKGWRIPVAANRRPTRESDDEDDEEKKGRGCS 562
+ +TVWAP LPL+IE++DT L Q++GWR+P A ++ D+ E++ RGC
Sbjct: 482 RLRASLRLTVWAPLLPLRIELTDTTLEQVRGWRVPGPAEGPAEPAAEASDEAERRARGCH 541
Query: 563 LQYQHATVRVLTQFVAESPDLG-QLTYMLGPDWQFDITDLVTEFMKVEEPKIAQLQDGRT 621
LQYQ A VR L F A D G +LT++LGPDW D++ LV +V + ++A L+ GR
Sbjct: 542 LQYQRAGVRFLAPFAAHPLDGGRRLTHLLGPDWLLDVSHLVAPHARVLDSRVASLEGGRV 601
Query: 622 LAGREPGITTVQVLSPLSDSILAEKTVIVLDDRVTIAELGVQLVAGMSLSLQPHRADKRA 681
+ GREPG+T+++V SPLSDSIL E+ + V DD+V++ EL VQ V G+SL+L A
Sbjct: 602 VVGREPGVTSIEVRSPLSDSILGEQALAVTDDKVSVLELRVQPVMGISLTLSRGTAHPGE 661
Query: 682 IVSTAAALDVLQSPQQEAIVSSWILFSDGSVTPLDIYDPKDYSVTVSSLDEMVVSVQANL 741
+ +T A L +P+QE +S W+ FSD +V P ++YD +D ++VS+ + +
Sbjct: 662 VTATCWAQSALPAPKQEVALSLWLSFSDHTVAPAELYDRRDLGLSVSAEEPGAILPAEEQ 721
Query: 742 ESKWPIVVAEGEGQGPLIKLEMMISEPCQKTKRKSVLAVG-------KGNVKVKFEPSSD 794
++ +VV+ +G + + + EPC++ + + LA G + PSS
Sbjct: 722 GAQLGVVVSGAGAEGLPLHVALHPPEPCRRGRHRVPLASGTAWLGLPPASTPAPALPSSP 781
Query: 795 EHQGGSNDIE-GINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQEESTNKSTTPQSP 853
+ + G R+ + + G ERA +E T +EE + +P
Sbjct: 782 AWSPPATEATMGGKRQVAGSVGGNTGVRGKFERAEEEARKEETEAREEEEEEEEEMVPAP 841
Query: 854 MEGKNKLLKSGGPDAFTSFPTQGKSPDPNNPSDLTVTSRGLTDLEIGMYALLCVFCLAIL 913
+T+LE+GMYALL VFC+AI
Sbjct: 842 QH--------------------------------------VTELELGMYALLGVFCVAIF 863
Query: 914 VFLINCVAFAWKYRHKRFAVS-EQGNIPHSHDWVWLGNEVELLENPVDITLPSE---ECT 969
+FL+N V F +Y+ K S P H+WVWLG + E L +D P E +
Sbjct: 864 IFLVNGVVFVLRYQRKEPPDSATDPTSPQPHNWVWLGTDQEELSRQLDRQSPGPPKGEGS 923
Query: 970 TMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSDYVYEKEIKNEPMNSSGPKRKRVKFTSY 1029
+ G E T S L + +G +RKRV+F ++
Sbjct: 924 CPCESGGGGEAPTLAPGPPGGTTSSSSTLARKE--------------AGGRRKRVEFVTF 969
Query: 1030 TTILPED------GGPYTNSILFDSDDNIKWVCQDMGLGDSQDFRDYMESLQ 1075
P G P SIL +++I+WVC+DMGL D ++ R+YME ++
Sbjct: 970 APAPPAQSPEEPVGAPAVQSILVAGEEDIRWVCEDMGLKDPEELRNYMERIR 1021
>gi|30089937 transmembrane protein 132A isoform b [Homo sapiens]
Length = 1023
Score = 493 bits (1268), Expect = e-139
Identities = 337/1072 (31%), Positives = 523/1072 (48%), Gaps = 125/1072 (11%)
Query: 35 PAYLPTNLHISNAEESFFLKEANQDLTRNSSLQARVEPFFIYRA--RTPPIINASYGPFS 92
P YLP L + +A E F +++ NSSL +R E F + + R P++ ASY PF+
Sbjct: 43 PVYLPAALELLDAPEHFRVQQVGHYPPANSSLSSRSETFLLLQPWPRAQPLLRASYPPFA 102
Query: 93 VEKIIPQELLLTSTAFGNMDKFPFNWKLKSHILDSSIYSNRPKVQTLFYVTGMGWDDSDL 152
++++P + + P W +++ +++++ P + LF++ G W
Sbjct: 103 TQQVVPPRVT-------EPHQRPVPWDVRAVSVEAAVTPAEPYARVLFHLKGQDWPPG-- 153
Query: 153 TEDLPCVKMFAFPEAREVAASCRLQGAPGLCVAELELLPEWFSSGLDLEPEEEIPALLGG 212
+ LPC ++ A A +CR Q + G CV ELEL WFS
Sbjct: 154 SGSLPCARLHATHPAGTAHQACRFQPSLGACVVELELPSHWFSQA-------------ST 200
Query: 213 TTMELFFTLYPADKA-GQCPLEEEGKWENNIHSGLESPQQAFPARERIGSVVVYPTQDDL 271
T EL +TL PA + G C EE + +QA P +G V + P D
Sbjct: 201 TRAELAYTLEPAAEGPGGCGSGEEN----------DPGEQALP----VGGVELRPA-DPP 245
Query: 272 KWSLVSLDENVVISVPLNLVREGDTATFLVSLTSSSVADQFTLRIKAAAGVKITAVRVSS 331
++ V LDE V + VP VR G + + L + A TLRIK G+ +TA R +
Sbjct: 246 QYQEVPLDEAVTLRVPDMPVRPGQLFSATLLLRHNFTASLLTLRIKVKKGLHVTAARPAQ 305
Query: 332 EDQWAVQEEIDNGSTQTSATLTCMGHR-----PDTQSRVNGSFYEILQVDFGIDNSSD-- 384
W + + GS + +TC HR PD+ E L VDF ++NS+
Sbjct: 306 PTLWTAKLDRFKGSRHHTTLITC--HRAGLTEPDSSPL---ELSEFLWVDFVVENSTGGG 360
Query: 385 LAGAQQITWQVEYPIE--DSMSELVVSEIFVSQTTFVGIVPLAMDTEVLNTAILTGKPVS 442
+A + +TWQ+EYP + ++ + +V EI VS+ ++PLA E++NTA LTG P
Sbjct: 361 VAVTRPVTWQLEYPGQAPEAEKDKMVWEILVSERDIRALIPLAKAEELVNTAPLTGVPQH 420
Query: 443 VPVKVVGVQEDGSVVDVSESVECKSADEDVIKVSNNCDSIFVNGKEMKSKVDTIVNFTHQ 502
VPV++V V G++V+V+E V C+SA+ V++VS CD++FV GKE + V+F +
Sbjct: 421 VPVRLVTVDGGGALVEVTEHVGCESANTQVLQVSEACDAVFVAGKESRGARGVRVDFWWR 480
Query: 503 HFTSQFEVTVWAPRLPLQIEISDTELSQIKGWRIPVAANRRPTRESDDEDDEEKKGRGCS 562
+ +TVWAP LPL+IE++DT L Q++GWR+P A ++ D+ E++ RGC
Sbjct: 481 RLRASLRLTVWAPLLPLRIELTDTTLEQVRGWRVPGPAEGPAEPAAEASDEAERRARGCH 540
Query: 563 LQYQHATVRVLTQFVAESPDLG-QLTYMLGPDWQFDITDLVTEFMKVEEPKIAQLQDGRT 621
LQYQ A VR L F A D G +LT++LGPDW D++ LV +V + ++A L+ GR
Sbjct: 541 LQYQRAGVRFLAPFAAHPLDGGRRLTHLLGPDWLLDVSHLVAPHARVLDSRVASLEGGRV 600
Query: 622 LAGREPGITTVQVLSPLSDSILAEKTVIVLDDRVTIAELGVQLVAGMSLSLQPHRADKRA 681
+ GREPG+T+++V SPLSDSIL E+ + V DD+V++ EL VQ V G+SL+L A
Sbjct: 601 VVGREPGVTSIEVRSPLSDSILGEQALAVTDDKVSVLELRVQPVMGISLTLSRGTAHPGE 660
Query: 682 IVSTAAALDVLQSPQQEAIVSSWILFSDGSVTPLDIYDPKDYSVTVSSLDEMVVSVQANL 741
+ +T A L +P+QE +S W+ FSD +V P ++YD +D ++VS+ + +
Sbjct: 661 VTATCWAQSALPAPKQEVALSLWLSFSDHTVAPAELYDRRDLGLSVSAEEPGAILPAEEQ 720
Query: 742 ESKWPIVVAEGEGQGPLIKLEMMISEPCQKTKRKSVLAVG-------KGNVKVKFEPSSD 794
++ +VV+ +G + + + EPC++ + + LA G + PSS
Sbjct: 721 GAQLGVVVSGAGAEGLPLHVALHPPEPCRRGRHRVPLASGTAWLGLPPASTPAPALPSSP 780
Query: 795 EHQGGSNDIE-GINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQEESTNKSTTPQSP 853
+ + G R+ + + G ERA +E T +EE + +P
Sbjct: 781 AWSPPATEATMGGKRQVAGSVGGNTGVRGKFERAEEEARKEETEAREEEEEEEEEMVPAP 840
Query: 854 MEGKNKLLKSGGPDAFTSFPTQGKSPDPNNPSDLTVTSRGLTDLEIGMYALLCVFCLAIL 913
+T+LE+GMYALL VFC+AI
Sbjct: 841 QH--------------------------------------VTELELGMYALLGVFCVAIF 862
Query: 914 VFLINCVAFAWKYRHKRFAVS-EQGNIPHSHDWVWLGNEVELLENPVDITLPSE---ECT 969
+FL+N V F +Y+ K S P H+WVWLG + E L +D P E +
Sbjct: 863 IFLVNGVVFVLRYQRKEPPDSATDPTSPQPHNWVWLGTDQEELSRQLDRQSPGPPKGEGS 922
Query: 970 TMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSDYVYEKEIKNEPMNSSGPKRKRVKFTSY 1029
+ G E T S L + +G +RKRV+F ++
Sbjct: 923 CPCESGGGGEAPTLAPGPPGGTTSSSSTLARKE--------------AGGRRKRVEFVTF 968
Query: 1030 TTILPED------GGPYTNSILFDSDDNIKWVCQDMGLGDSQDFRDYMESLQ 1075
P G P SIL +++I+WVC+DMGL D ++ R+YME ++
Sbjct: 969 APAPPAQSPEEPVGAPAVQSILVAGEEDIRWVCEDMGLKDPEELRNYMERIR 1020
>gi|169205040 PREDICTED: similar to TMEM132B protein [Homo sapiens]
Length = 199
Score = 314 bits (804), Expect = 3e-85
Identities = 155/177 (87%), Positives = 161/177 (90%), Gaps = 1/177 (0%)
Query: 887 LTVTSRGLTDLEIGMYALLCVFCLAILVFLINCVAFAWKYRHKRFAVSEQGNIPHSHDWV 946
+ VTSRGL D EIGMYALL VF AILVFLINCVAF+WKYRHKRFAVS+QGN+PHSH+WV
Sbjct: 21 ILVTSRGLRDFEIGMYALLYVFFPAILVFLINCVAFSWKYRHKRFAVSQQGNVPHSHNWV 80
Query: 947 WLGNEVELLENPVDITLPSEECTTMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSDYVYE 1006
WLGNEV LLEN VDITLPSEECTTMIDRGLQFEERNFLLNGS QKTFHSQL R DYVYE
Sbjct: 81 WLGNEVGLLENRVDITLPSEECTTMIDRGLQFEERNFLLNGSFQKTFHSQLFRLVDYVYE 140
Query: 1007 KEIKNEPMNSSGPKRKRVKFTSYTTILPEDGGPYTNSILFDSDDNIKWVCQDMGLGD 1063
KEIKNEPMNSSGPKRKRVKFTSY TILPEDG PYTNSILFDS DNIK VC+DMGLGD
Sbjct: 141 KEIKNEPMNSSGPKRKRVKFTSYITILPEDGSPYTNSILFDS-DNIKCVCEDMGLGD 196
>gi|169205620 PREDICTED: similar to TMEM132B protein [Homo sapiens]
Length = 199
Score = 314 bits (804), Expect = 3e-85
Identities = 155/177 (87%), Positives = 161/177 (90%), Gaps = 1/177 (0%)
Query: 887 LTVTSRGLTDLEIGMYALLCVFCLAILVFLINCVAFAWKYRHKRFAVSEQGNIPHSHDWV 946
+ VTSRGL D EIGMYALL VF AILVFLINCVAF+WKYRHKRFAVS+QGN+PHSH+WV
Sbjct: 21 ILVTSRGLRDFEIGMYALLYVFFPAILVFLINCVAFSWKYRHKRFAVSQQGNVPHSHNWV 80
Query: 947 WLGNEVELLENPVDITLPSEECTTMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSDYVYE 1006
WLGNEV LLEN VDITLPSEECTTMIDRGLQFEERNFLLNGS QKTFHSQL R DYVYE
Sbjct: 81 WLGNEVGLLENRVDITLPSEECTTMIDRGLQFEERNFLLNGSFQKTFHSQLFRLVDYVYE 140
Query: 1007 KEIKNEPMNSSGPKRKRVKFTSYTTILPEDGGPYTNSILFDSDDNIKWVCQDMGLGD 1063
KEIKNEPMNSSGPKRKRVKFTSY TILPEDG PYTNSILFDS DNIK VC+DMGLGD
Sbjct: 141 KEIKNEPMNSSGPKRKRVKFTSYITILPEDGSPYTNSILFDS-DNIKCVCEDMGLGD 196
>gi|239744766 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 314 bits (804), Expect = 3e-85
Identities = 155/177 (87%), Positives = 161/177 (90%), Gaps = 1/177 (0%)
Query: 887 LTVTSRGLTDLEIGMYALLCVFCLAILVFLINCVAFAWKYRHKRFAVSEQGNIPHSHDWV 946
+ VTSRGL D EIGMYALL VF AILVFLINCVAF+WKYRHKRFAVS+QGN+PHSH+WV
Sbjct: 21 ILVTSRGLRDFEIGMYALLYVFFPAILVFLINCVAFSWKYRHKRFAVSQQGNVPHSHNWV 80
Query: 947 WLGNEVELLENPVDITLPSEECTTMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSDYVYE 1006
WLGNEV LLEN VDITLPSEECTTMIDRGLQFEERNFLLNGS QKTFHSQL R DYVYE
Sbjct: 81 WLGNEVGLLENRVDITLPSEECTTMIDRGLQFEERNFLLNGSFQKTFHSQLFRLVDYVYE 140
Query: 1007 KEIKNEPMNSSGPKRKRVKFTSYTTILPEDGGPYTNSILFDSDDNIKWVCQDMGLGD 1063
KEIKNEPMNSSGPKRKRVKFTSY TILPEDG PYTNSILFDS DNIK VC+DMGLGD
Sbjct: 141 KEIKNEPMNSSGPKRKRVKFTSYITILPEDGSPYTNSILFDS-DNIKCVCEDMGLGD 196
>gi|32490557 poly(A) polymerase alpha [Homo sapiens]
Length = 745
Score = 34.7 bits (78), Expect = 0.50
Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 26/225 (11%)
Query: 321 GVKITAVRVSSEDQWAVQEEIDNGSTQTSATLT--------CMGHRPDTQSRVNGSFYEI 372
GVK+TA+ SS D + + + TSAT T G + S I
Sbjct: 512 GVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTNI 571
Query: 373 LQVDFGID--NSSDLAG---AQQITWQVEYPIEDSMSELVVSEIFVSQTTFVGIVPLAMD 427
+ + NSS+ +G ++ I P + VS + VS T V P +
Sbjct: 572 QATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRV-VSSTRLVNPPPRSSG 630
Query: 428 TEVLNTAILTGKPVSVPVKVVGVQEDGSVVDVSESVECKSADEDVIKVSNNCDSIFVNGK 487
N A +P +VGV+ S ES + +ED NC ++ + K
Sbjct: 631 ----NAATSGNAATKIPTPIVGVKRTSS-PHKEESPKKTKTEEDETSEDANCLALSGHDK 685
Query: 488 -EMKSKVDTIVNFTHQHFTSQFEVTVWAPRLPLQIEISDTELSQI 531
E K ++DT + T+Q E A L + S T+LS I
Sbjct: 686 TEAKEQLDT------ETSTTQSETIQTAASLLASQKTSSTDLSDI 724
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 34.7 bits (78), Expect = 0.50
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 793 SDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQEESTNKSTTPQS 852
+DE DI+ NR + + + E + + + Q+ + P + T + P S
Sbjct: 140 NDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSS 199
Query: 853 PMEGKNKLLKSGGPDAFTSFPTQGK---SPDPNNP 884
G +L G + T+ P QG S PN P
Sbjct: 200 APPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQP 234
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 34.7 bits (78), Expect = 0.50
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 793 SDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQEESTNKSTTPQS 852
+DE DI+ NR + + + E + + + Q+ + P + T + P S
Sbjct: 694 NDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSS 753
Query: 853 PMEGKNKLLKSGGPDAFTSFPTQGK---SPDPNNP 884
G +L G + T+ P QG S PN P
Sbjct: 754 APPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQP 788
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 34.7 bits (78), Expect = 0.50
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 3/95 (3%)
Query: 793 SDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQEESTNKSTTPQS 852
+DE DI+ NR + + + E + + + Q+ + P + T + P S
Sbjct: 694 NDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSS 753
Query: 853 PMEGKNKLLKSGGPDAFTSFPTQGK---SPDPNNP 884
G +L G + T+ P QG S PN P
Sbjct: 754 APPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQP 788
>gi|156071420 hypothetical protein LOC728912 [Homo sapiens]
Length = 790
Score = 33.1 bits (74), Expect = 1.5
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 5/135 (3%)
Query: 544 PTRESDDEDDEEKKGRGCSLQYQHATVRVLTQFVAESPDLGQLTYMLGPDWQFDITDLVT 603
P ESDDE++EE KG Q + + Q ES D G T + P+ +
Sbjct: 453 PENESDDEEEEE-KGPVSPRNLQESEEEEVPQ---ESWDEGYSTLSIPPERLASYQSYSS 508
Query: 604 EFMKVEEPKIAQLQD-GRTLAGREPGITTVQVLSPLSDSILAEKTVIVLDDRVTIAELGV 662
F +EE ++ D GR + LS +L EK VL D +
Sbjct: 509 TFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKEPEVLQDSLDRCYSTP 568
Query: 663 QLVAGMSLSLQPHRA 677
+ G++ S QP+R+
Sbjct: 569 SVYLGLTDSCQPYRS 583
>gi|119709825 neuroblastoma breakpoint family, member 11-like [Homo
sapiens]
Length = 790
Score = 33.1 bits (74), Expect = 1.5
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 5/135 (3%)
Query: 544 PTRESDDEDDEEKKGRGCSLQYQHATVRVLTQFVAESPDLGQLTYMLGPDWQFDITDLVT 603
P ESDDE++EE KG Q + + Q ES D G T + P+ +
Sbjct: 453 PENESDDEEEEE-KGPVSPRNLQESEEEEVPQ---ESWDEGYSTLSIPPERLASYQSYSS 508
Query: 604 EFMKVEEPKIAQLQD-GRTLAGREPGITTVQVLSPLSDSILAEKTVIVLDDRVTIAELGV 662
F +EE ++ D GR + LS +L EK VL D +
Sbjct: 509 TFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKEPEVLQDSLDRCYSTP 568
Query: 663 QLVAGMSLSLQPHRA 677
+ G++ S QP+R+
Sbjct: 569 SVYLGLTDSCQPYRS 583
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 32.3 bits (72), Expect = 2.5
Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 34/160 (21%)
Query: 182 LCVAELELLPEWFSSGLDLEPEEEIPALLGG----TTMELFFTLYP---ADKAGQC-PLE 233
L V EL L P+ + D +PE + + GG + F ++P KAG P+
Sbjct: 765 LLVEELRLNPDGVETVNDTKPELNVASSEGGEMERRDSDSFLNIFPEKQVTKAGNTEPVL 824
Query: 234 EEGKW----------------ENNIHSGLESPQQ-----AFPARER---IGSVVVYPTQD 269
EE W ++ + + L SP++ A PA E + ++V +P +D
Sbjct: 825 EE--WIPVLQRPSRTAAVPTVKDALDAALPSPEEGTSIAAVPAPEGTAVVAALVPFPHED 882
Query: 270 DLKWSLVSLDENVVISVPLNLVREGDTATFLVSLTSSSVA 309
L S+VSL+E V + ++ VS+ + A
Sbjct: 883 ILVASIVSLEEEDVTAAAVSAPERATVPAVTVSVPEGTAA 922
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 32.3 bits (72), Expect = 2.5
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 767 EPCQKTKRKSVLAV-----GKGNVKVKFEPSSDEHQGGSNDIEGINREYKDHLSNSIERE 821
+P QK K+K + KG K F D + N ++G E K + +++
Sbjct: 593 QPQQKKKKKKNNHIVAEDPSKGFGKDDFPGGVDNQELNRNSLDGSQEEKKKKKRSKAKKD 652
Query: 822 GNQERAVQEWFHRGTPVGQEESTNKSTTPQSPMEGKNKLLKSGGPDAFTSFPTQGKSPDP 881
+ + +E + P +E T K+ P+ P E K K K+ P +S + K PD
Sbjct: 653 PKEPKEPKE---KKEP--KEPKTPKA--PKIPKEPKEKKAKTATPKPKSSKKSSNKKPDS 705
Query: 882 NNPSDLTVTSRGLTD 896
+ ++G T+
Sbjct: 706 EASALKKKVNKGKTE 720
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 32.3 bits (72), Expect = 2.5
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 790 EPSSDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQEESTNKSTT 849
E E + G + E E + +E E ++E A +E V + E KS
Sbjct: 560 EKEEGEQEEGETEAEAEGEEAEAKEEKKVE-EKSEEVATKEELVADAKVEKPEKA-KSPV 617
Query: 850 PQSPMEGKNKLLKSGGPDAFTSFPTQGKSPDPNNP 884
P+SP+E K K P + +GKSP P +P
Sbjct: 618 PKSPVEEKGK-----SPVPKSPVEEKGKSPVPKSP 647
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 32.3 bits (72), Expect = 2.5
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 790 EPSSDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQEESTNKSTT 849
E E + G + E E + +E E ++E A +E V + E KS
Sbjct: 184 EKEEGEQEEGETEAEAEGEEAEAKEEKKVE-EKSEEVATKEELVADAKVEKPEKA-KSPV 241
Query: 850 PQSPMEGKNKLLKSGGPDAFTSFPTQGKSPDPNNP 884
P+SP+E K K P + +GKSP P +P
Sbjct: 242 PKSPVEEKGK-----SPVPKSPVEEKGKSPVPKSP 271
>gi|44890068 zinc finger protein 262 [Homo sapiens]
Length = 1548
Score = 32.3 bits (72), Expect = 2.5
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 784 NVKVKFEPSSDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQE--------WFHRG 835
N+++K EP DE+ +G+ + KD N+ E Q++ QE + G
Sbjct: 246 NIRIKEEPLDDEYDKAMAPQQGLLDKIKDEPDNAQEYSHGQQQKTQEGELKISAVFSVSG 305
Query: 836 TPVGQEESTNKSTTPQSPMEGKNKLLKS 863
+P+ + +T P G NK+L S
Sbjct: 306 SPLAPQLTT--GFQPSLASSGMNKMLPS 331
>gi|154937342 ring finger protein 190 [Homo sapiens]
Length = 808
Score = 32.0 bits (71), Expect = 3.2
Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 13/118 (11%)
Query: 772 TKRKSVLAVGKGNVKVKFEPSSDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEW 831
TK + VG V + S EH+ G++D EG ++Y + NS+ ++
Sbjct: 405 TKSEPRQEVGVNAENVWSDCISVEHRPGTHDSEGYWKDYLNSSQNSL-----------DY 453
Query: 832 FHRGTPVGQEESTNKSTTPQSPMEGKNKLLKSGGPDAFTSFPTQGKSPDPNNPSDLTV 889
F G P+ S N S P P + L+ P + T S D S V
Sbjct: 454 FISGRPISPRSSVNSSYNP--PASFMHSALRDDIPVDLSMSSTSVHSSDSEGNSGFHV 509
>gi|154937340 ring finger protein 190 [Homo sapiens]
Length = 808
Score = 32.0 bits (71), Expect = 3.2
Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 13/118 (11%)
Query: 772 TKRKSVLAVGKGNVKVKFEPSSDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEW 831
TK + VG V + S EH+ G++D EG ++Y + NS+ ++
Sbjct: 405 TKSEPRQEVGVNAENVWSDCISVEHRPGTHDSEGYWKDYLNSSQNSL-----------DY 453
Query: 832 FHRGTPVGQEESTNKSTTPQSPMEGKNKLLKSGGPDAFTSFPTQGKSPDPNNPSDLTV 889
F G P+ S N S P P + L+ P + T S D S V
Sbjct: 454 FISGRPISPRSSVNSSYNP--PASFMHSALRDDIPVDLSMSSTSVHSSDSEGNSGFHV 509
>gi|24429592 chondroitin sulfate N-acetylgalactosaminyltransferase 2
[Homo sapiens]
Length = 542
Score = 31.6 bits (70), Expect = 4.2
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 728 SSLDEMVVSVQANLESKWPIVVAEGEGQGPLIKLEMMIS-----EPCQKTKRKSVLAVGK 782
S +D+ VS+ A L S++ ++ E + +LEM ++ +P +K KR ++ V +
Sbjct: 126 SQIDKAEVSIGAKLPSEYGVIPFESFTLMKVFQLEMGLTRHPEEKPVRKDKRDELVEVIE 185
Query: 783 GNVKVKFEPSSDEHQ 797
++V P D+ Q
Sbjct: 186 AGLEVINNPDEDDEQ 200
>gi|150417973 supervillin isoform 2 [Homo sapiens]
Length = 2214
Score = 31.6 bits (70), Expect = 4.2
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 23/155 (14%)
Query: 697 QEAIVSSWILFSDGSVTPLDIYDPKDYSVTVSSLDEMVVSVQANLESKWPIVVAEGEGQG 756
+ A SW+ + +V PK S+TV D V ESK EGEG+G
Sbjct: 386 ENASECSWVASATQNV-------PKPPSLTVLEGDGRDSPVLHVCESK--AEEEEGEGEG 436
Query: 757 PLIKLEMMISEPCQKTKRKSVLAVGKGNVKVKFEPSSDEHQGGSNDIEGINREYKDHLSN 816
+ ++ +E +++K+ + G G V+ +PS +E G + + E++ L N
Sbjct: 437 EEKEEDVCFTEALEQSKKTLLALEGDGLVRSPEDPSRNE-DFGKPAVSTVTLEHQKELEN 495
Query: 817 ----------SIEREGNQERAVQEWFHRGTPVGQE 841
ER G E + + + PV Q+
Sbjct: 496 VAQPPQAPHQPTERTGRSEMVL---YIQSEPVSQD 527
>gi|31742501 sorting nexin family member 27 [Homo sapiens]
Length = 528
Score = 31.6 bits (70), Expect = 4.2
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 741 LESKWPIVVAEGEGQGPLIKLEMMISEPCQKTKRKSVLAVGKGNVKVKFEPSSDEHQGGS 800
L KWP ++E + LE + + C S+ +G+ ++ +F SDE+ G
Sbjct: 219 LPGKWPFSLSEQQLDARRRGLEEYLEKVC------SIRVIGESDIMQEFLSESDENYNGV 272
Query: 801 NDIE 804
+D+E
Sbjct: 273 SDVE 276
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 31.6 bits (70), Expect = 4.2
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 643 LAEKTVIVLDDRVTIAELGVQLVAGMSLSLQPHRADKRAIVSTAAALDVLQSPQQEAIVS 702
++E TV+ +D + I LV S PH T Q+P A S
Sbjct: 827 ISEHTVLSVDGKEVIGPSSPDLVVASEHSFPPH---------TTEMTSECQAPPLSATPS 877
Query: 703 SWILFSDGSVTPLDIYDPKDYSVTVSSL 730
+++ SD L+ Y P S + S+
Sbjct: 878 EYVVLSDEEAVELERYTPSSTSASEFSV 905
>gi|105990532 apolipoprotein B precursor [Homo sapiens]
Length = 4563
Score = 31.2 bits (69), Expect = 5.5
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 941 HSHDWVWLGNEVELLENPVDITLPSEECTTMIDRGLQFEERNFLLNGSSQKTFHSQLLRP 1000
H + ++ GN +E N V +L +E+ T + G+ + N L S+ K FH +
Sbjct: 2839 HGSEMLFFGNAIEGKSNTV-ASLHTEKNTLELSNGVIVKINNQLTLDSNTKYFHKLNIPK 2897
Query: 1001 SDYVYEKEIKNE 1012
D+ + +++NE
Sbjct: 2898 LDFSSQADLRNE 2909
>gi|5032055 reticulon 2 isoform A [Homo sapiens]
Length = 545
Score = 31.2 bits (69), Expect = 5.5
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 28/127 (22%)
Query: 794 DEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPV--------------- 838
D +GG++D + RE H + E +E Q+W GTP
Sbjct: 23 DSTEGGNDDSDF--REL--HTAREFSEEDEEETTSQDW---GTPRELTFSYIAFDGVVGS 75
Query: 839 -GQEESTNKSTTPQ--SPMEGKNKLLKSGGPDAFTSFPTQGKSPDP---NNPSDLTVTSR 892
G+ +ST + PQ S E +++ + D+ S P+ +SP+P +P + R
Sbjct: 76 GGRRDSTARRPRPQGRSVSEPRDQHPQPSLGDSLESIPSLSQSPEPGRRGDPDTAPPSER 135
Query: 893 GLTDLEI 899
L DL +
Sbjct: 136 PLEDLRL 142
>gi|46255005 reticulon 2 isoform B [Homo sapiens]
Length = 472
Score = 31.2 bits (69), Expect = 5.5
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 28/127 (22%)
Query: 794 DEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPV--------------- 838
D +GG++D + RE H + E +E Q+W GTP
Sbjct: 23 DSTEGGNDDSDF--REL--HTAREFSEEDEEETTSQDW---GTPRELTFSYIAFDGVVGS 75
Query: 839 -GQEESTNKSTTPQ--SPMEGKNKLLKSGGPDAFTSFPTQGKSPDP---NNPSDLTVTSR 892
G+ +ST + PQ S E +++ + D+ S P+ +SP+P +P + R
Sbjct: 76 GGRRDSTARRPRPQGRSVSEPRDQHPQPSLGDSLESIPSLSQSPEPGRRGDPDTAPPSER 135
Query: 893 GLTDLEI 899
L DL +
Sbjct: 136 PLEDLRL 142
>gi|5454112 transcription factor Dp-2 (E2F dimerization partner 2)
[Homo sapiens]
Length = 386
Score = 31.2 bits (69), Expect = 5.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 500 THQHFTSQFEVTVWAPRLPLQIEISDTELSQIKGWRIPVAANRRPTRESDDEDDEEKK 557
T Q TS V + +P P ++ T +++ GW V +R+ R+ D D E K
Sbjct: 5 TPQRLTSSGSVLIGSPYTPAPAMVTQTHIAEATGW---VPGDRKRARKFIDSDFSESK 59
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,779,740
Number of Sequences: 37866
Number of extensions: 1878476
Number of successful extensions: 5000
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 4932
Number of HSP's gapped (non-prelim): 58
length of query: 1078
length of database: 18,247,518
effective HSP length: 113
effective length of query: 965
effective length of database: 13,968,660
effective search space: 13479756900
effective search space used: 13479756900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.