Guide to the Human Genome
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Name: LOC652022 Sequence: fasta or formatted (233aa) NCBI GI: 89062345
Description:

PREDICTED: similar to mindbomb homolog 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.2         33           3
 C cysteine            0.0          0           0
 D aspartate           7.7         18           1
 E glutamate          10.7         25           2
 F phenylalanine       2.1          5           1
 G glycine             3.4          8           1
 H histidine           1.7          4           1
 I isoleucine          2.1          5           1
 K lysine              4.3         10           2
 L leucine             8.2         19           2
 M methionine          4.3         10           1
 N asparagine          5.2         12           2
 P proline             8.2         19           2
 Q glutamine           3.4          8           1
 R arginine            3.9          9           1
 S serine              5.2         12           1
 T threonine           5.6         13           2
 V valine              6.4         15           2
 W tryptophan          0.4          1           1
 Y tyrosine            3.0          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to mindbomb homolog 2 
MIB2                  0.112   mindbomb homolog 2 
MIB1                  0.089   mindbomb homolog 1 
DAPK1                 0.087   death-associated protein kinase 1 
ANKRD54               0.087   ankyrin repeat domain 54 
ANKRD50               0.084   ankyrin repeat domain 50 
INVS                  0.084   inversin isoform a 
INVS                  0.084   inversin isoform b 
ANKRD2                0.082   ankyrin repeat domain 2 isoform b 
ANKS1B                0.082   cajalin 2 isoform a 
ANK1                  0.077   ankyrin 1 isoform 9 
ANK1                  0.077   ankyrin 1 isoform 1 
ANK1                  0.077   ankyrin 1 isoform 3 
ANK1                  0.077   ankyrin 1 isoform 2 
ANK1                  0.077   ankyrin 1 isoform 4 
TNKS2                 0.077   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKDD1A               0.077   ankyrin repeat and death domain containing 1A 
ANKRD20A5             0.075   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A5             0.075   PREDICTED: ankyrin repeat domain 20 family, member ...
ANKRD20A3             0.073   ankyrin repeat domain 20 family, member A3 
ANKRD20A2             0.073   ankyrin repeat domain 20 family, member A2 
ANK3                  0.073   ankyrin 3 isoform 1 
HACE1                 0.073   HECT domain and ankyrin repeat containing, E3 ubiqu...
PSMD10                0.071   proteasome 26S non-ATPase subunit 10 isoform 1 
RAI14                 0.071   retinoic acid induced 14 isoform d 
ANKRD1                0.071   cardiac ankyrin repeat protein 
ANKRD20A1             0.071   ankyrin repeat domain 20 family, member A1 
ANKRD20A4             0.071   ankyrin repeat domain 20 family, member A4 
UACA                  0.068   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.068   uveal autoantigen with coiled-coil domains and ankyr...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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