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Search of human proteins with 89035075
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89035075 PREDICTED: similar to hCG1730248 [Homo sapiens]
(156 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89035075 PREDICTED: similar to hCG1730248 [Homo sapiens] 330 3e-91
gi|89034219 PREDICTED: similar to hCG1730248 [Homo sapiens] 327 2e-90
gi|122937277 heat shock transcription factor family member 5 [Ho... 32 0.29
gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo ... 30 0.64
gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo ... 30 0.64
gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo ... 30 0.64
gi|123173757 RAVER1 [Homo sapiens] 30 0.64
gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens] 30 0.83
gi|11038659 ADAM metallopeptidase with thrombospondin type 1 mot... 30 0.83
gi|110825974 ADAM metallopeptidase with thrombospondin type 1 mo... 30 0.83
gi|18152771 hypothetical protein LOC128653 [Homo sapiens] 30 0.83
gi|15029506 homeobox D8 [Homo sapiens] 29 1.4
gi|151101459 SAPS domain family, member 1 [Homo sapiens] 29 1.4
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 29 1.4
gi|122937396 coiled-coil domain containing 150 [Homo sapiens] 29 1.4
gi|145699105 connexin40.1 [Homo sapiens] 29 1.4
gi|126090909 engrailed homeobox 1 [Homo sapiens] 29 1.8
gi|24308458 Lix1 homolog (mouse) like [Homo sapiens] 29 1.8
gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens] 29 1.8
gi|12751477 forkhead box L2 [Homo sapiens] 28 2.4
gi|239756433 PREDICTED: hypothetical protein [Homo sapiens] 28 2.4
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 28 2.4
gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo ... 28 2.4
gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo ... 28 2.4
gi|150456465 tetratricopeptide repeat domain 9 [Homo sapiens] 28 2.4
gi|32307177 forkhead box G1 [Homo sapiens] 28 2.4
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens] 28 2.4
gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sa... 28 3.2
gi|21735552 mitogen-activated protein kinase kinase kinase 12 [H... 28 4.1
gi|169161340 PREDICTED: hypothetical protein [Homo sapiens] 28 4.1
>gi|89035075 PREDICTED: similar to hCG1730248 [Homo sapiens]
Length = 156
Score = 330 bits (846), Expect = 3e-91
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MATRDASHAGLPATELRRKPCPGLSEDRCGMTGEEAVVVTAVVAPEAGREEEQPPPPAGL 60
MATRDASHAGLPATELRRKPCPGLSEDRCGMTGEEAVVVTAVVAPEAGREEEQPPPPAGL
Sbjct: 1 MATRDASHAGLPATELRRKPCPGLSEDRCGMTGEEAVVVTAVVAPEAGREEEQPPPPAGL 60
Query: 61 GCGARGEPGRGPLEHGQQWKKFLYCEPHKRIKEVLEEERHIKRDECHIKNPAAVAVEGIW 120
GCGARGEPGRGPLEHGQQWKKFLYCEPHKRIKEVLEEERHIKRDECHIKNPAAVAVEGIW
Sbjct: 61 GCGARGEPGRGPLEHGQQWKKFLYCEPHKRIKEVLEEERHIKRDECHIKNPAAVAVEGIW 120
Query: 121 SIKRNLPVGGLKPGLPSRNSLLPQAKYYSRHGGLRR 156
SIKRNLPVGGLKPGLPSRNSLLPQAKYYSRHGGLRR
Sbjct: 121 SIKRNLPVGGLKPGLPSRNSLLPQAKYYSRHGGLRR 156
>gi|89034219 PREDICTED: similar to hCG1730248 [Homo sapiens]
Length = 156
Score = 327 bits (839), Expect = 2e-90
Identities = 154/156 (98%), Positives = 156/156 (100%)
Query: 1 MATRDASHAGLPATELRRKPCPGLSEDRCGMTGEEAVVVTAVVAPEAGREEEQPPPPAGL 60
MATRDASHAGLPATELRRKPCPGLSEDRCGMTGEEAVVVTAVVAP+AGREEEQPPPPAGL
Sbjct: 1 MATRDASHAGLPATELRRKPCPGLSEDRCGMTGEEAVVVTAVVAPKAGREEEQPPPPAGL 60
Query: 61 GCGARGEPGRGPLEHGQQWKKFLYCEPHKRIKEVLEEERHIKRDECHIKNPAAVAVEGIW 120
GCGARGEPGRGPLEHGQQWKKFLYCEPHKRIKEVLEEERHIKRDECHIKNPAAVA+EGIW
Sbjct: 61 GCGARGEPGRGPLEHGQQWKKFLYCEPHKRIKEVLEEERHIKRDECHIKNPAAVALEGIW 120
Query: 121 SIKRNLPVGGLKPGLPSRNSLLPQAKYYSRHGGLRR 156
SIKRNLPVGGLKPGLPSRNSLLPQAKYYSRHGGLRR
Sbjct: 121 SIKRNLPVGGLKPGLPSRNSLLPQAKYYSRHGGLRR 156
>gi|122937277 heat shock transcription factor family member 5 [Homo
sapiens]
Length = 596
Score = 31.6 bits (70), Expect = 0.29
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 35 EAVVVTAVVAPEAGREEEQPPPPAGLGCGARGEPGRGPLEHGQQWKKF 82
+ +++T+ A A + +QPPPPA G R EP GP+ GQ + F
Sbjct: 153 QRLLITSASAATAPLQHQQPPPPA----GPRPEP-HGPVAVGQFHRSF 195
>gi|239745773 PREDICTED: hypothetical protein XP_002343550 [Homo
sapiens]
Length = 323
Score = 30.4 bits (67), Expect = 0.64
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 44 APEAGREEEQPPPPAGLGCGARGEPGRGPL 73
+P AGR P G G G RG PG GP+
Sbjct: 144 SPLAGRSVRAPQRRVGAGAGWRGGPGLGPV 173
>gi|239745771 PREDICTED: hypothetical protein XP_002343549 [Homo
sapiens]
Length = 323
Score = 30.4 bits (67), Expect = 0.64
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 44 APEAGREEEQPPPPAGLGCGARGEPGRGPL 73
+P AGR P G G G RG PG GP+
Sbjct: 144 SPLAGRSVRAPQRRVGAGAGWRGGPGLGPV 173
>gi|239745769 PREDICTED: hypothetical protein XP_002343548 [Homo
sapiens]
Length = 323
Score = 30.4 bits (67), Expect = 0.64
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 44 APEAGREEEQPPPPAGLGCGARGEPGRGPL 73
+P AGR P G G G RG PG GP+
Sbjct: 144 SPLAGRSVRAPQRRVGAGAGWRGGPGLGPV 173
>gi|123173757 RAVER1 [Homo sapiens]
Length = 756
Score = 30.4 bits (67), Expect = 0.64
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 12 PATELRRKPCPGLSE----DRCGMTGEEAVVV---TAVVAPEAGREEEQPPPPAGLGCGA 64
P + R P PGLS+ D G + + P + PPP+G G +
Sbjct: 585 PLSSARLPPEPGLSDSYSFDYPSDMGPRRLFSHPREPALGPHGPSRHKMSPPPSGFGERS 644
Query: 65 RGEPGRGPLEH 75
G G GPL H
Sbjct: 645 SGGSGGGPLSH 655
>gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens]
Length = 271
Score = 30.0 bits (66), Expect = 0.83
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Query: 18 RKPCPGLSEDRCGMTGEEAVVVTAVVAPEAGREE-EQPPPPAGLGCGARGEPGRGPL--- 73
R+P S + + TA + P+A RE+ E P P G G G+ PG
Sbjct: 39 RQPPSSSSSSTSSTSSTSSSSTTAPLLPKAAREKPEAPAEPPGPGPGSGAHPGGSARPDA 98
Query: 74 --EHGQQWKKFLYCEPHKRIKEV 94
E QQ ++ + KR++++
Sbjct: 99 KEEQQQQLRRKINSRERKRMQDL 121
>gi|11038659 ADAM metallopeptidase with thrombospondin type 1
motif, 2 isoform 2 [Homo sapiens]
Length = 566
Score = 30.0 bits (66), Expect = 0.83
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 54 PPPPAGLGCGARGEPGRGPLEHGQQ 78
PPPPA A +P GPL HG +
Sbjct: 31 PPPPANARLAAAADPPGGPLGHGAE 55
>gi|110825974 ADAM metallopeptidase with thrombospondin type 1
motif, 2 isoform 1 preproprotein [Homo sapiens]
Length = 1211
Score = 30.0 bits (66), Expect = 0.83
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 54 PPPPAGLGCGARGEPGRGPLEHGQQ 78
PPPPA A +P GPL HG +
Sbjct: 31 PPPPANARLAAAADPPGGPLGHGAE 55
>gi|18152771 hypothetical protein LOC128653 [Homo sapiens]
Length = 165
Score = 30.0 bits (66), Expect = 0.83
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 45 PEAGREEEQPPPPAGLGCG-ARGEPGRGPLE-HGQQWKKFL 83
PEA RE+ P PP GLG G G P R P+ G W + L
Sbjct: 9 PEA-REDPIPVPPRGLGAGEGSGSPVRPPVSTWGPSWAQLL 48
>gi|15029506 homeobox D8 [Homo sapiens]
Length = 290
Score = 29.3 bits (64), Expect = 1.4
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 45 PEAGREEEQPPPPAGLGCGARGEPGRG 71
P+A PPP+G GCG G GRG
Sbjct: 66 PQAHAHPHPSPPPSGTGCG--GREGRG 90
>gi|151101459 SAPS domain family, member 1 [Homo sapiens]
Length = 881
Score = 29.3 bits (64), Expect = 1.4
Identities = 28/102 (27%), Positives = 39/102 (38%), Gaps = 14/102 (13%)
Query: 46 EAGREEEQPPPPAGLGCGARG------EPGRGPLEHGQQWKKFLYCEPHKRIKEVLEEER 99
E +EE+ G+GC ARG P GP G W P + R
Sbjct: 673 EEEEDEEEEEDEEGIGCAARGGATPLSYPSPGPQPPGPSWTATFDPVP----TDAPTSPR 728
Query: 100 HIKRDECHIKNPAAVAVEGIWSIKRNLPVGGLKPGLPSRNSL 141
+E H PA +G S+ + LP L P+R++L
Sbjct: 729 VSGEEELHTGPPAP---QGPLSVPQGLPTQSL-ASPPARDAL 766
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 29.3 bits (64), Expect = 1.4
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 14 TELRRKPCPGLSEDRCGMTG--EEAVVVTAVVAPEAGREEEQPPPPAGLGCGA--RGEPG 69
T R +PCP CG TG ++ +P+ G + P P G GA R
Sbjct: 855 TPPRGRPCPQRRSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSAS 914
Query: 70 RGPLEHGQQWKKFL 83
+G G +K L
Sbjct: 915 QGAGSRGLSEEKTL 928
>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
Length = 1101
Score = 29.3 bits (64), Expect = 1.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 70 RGPLEHGQQWKKFLYCEPHKRIKEVLEEERHIKRDECHIKNPAAVAVEGIWSIKRNL 126
RG LE Q KK L E + +EV + E+ I ++ C+++ A I ++ NL
Sbjct: 457 RGELEASMQEKKSLLEEKERFQREVNKTEKEIVQERCNLEKELAKNKVDINTLTHNL 513
>gi|145699105 connexin40.1 [Homo sapiens]
Length = 370
Score = 29.3 bits (64), Expect = 1.4
Identities = 17/51 (33%), Positives = 20/51 (39%)
Query: 16 LRRKPCPGLSEDRCGMTGEEAVVVTAVVAPEAGREEEQPPPPAGLGCGARG 66
+RR+P P S +G E GREEE P P G G G
Sbjct: 224 MRRRPGPPTSPSIRKQSGASGHAEGRRTDEEGGREEEGAPAPPGARAGGEG 274
>gi|126090909 engrailed homeobox 1 [Homo sapiens]
Length = 392
Score = 28.9 bits (63), Expect = 1.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 42 VVAPEAGREEEQPPPPAGLGCGARGEPGRG 71
++ P+ G ++EQPPP + ARG G G
Sbjct: 110 ILRPDFGCKKEQPPPQLLVAAAARGGAGGG 139
>gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
Length = 337
Score = 28.9 bits (63), Expect = 1.8
Identities = 16/41 (39%), Positives = 17/41 (41%)
Query: 28 RCGMTGEEAVVVTAVVAPEAGREEEQPPPPAGLGCGARGEP 68
R G+TG A T P PPPP L GA G P
Sbjct: 25 RPGVTGAAAATATPPAGPPPAPPPPAPPPPPLLLSGAPGLP 65
>gi|194018497 FYVE, RhoGEF and PH domain containing 5 [Homo sapiens]
Length = 1462
Score = 28.9 bits (63), Expect = 1.8
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 23/117 (19%)
Query: 34 EEAVVVTAVVAPEAGREEEQPPPPAGLGCGARG-----------EPGRGPLEHGQQWKKF 82
E +V A+V+PE+ EEE+ G CG G PG G L +
Sbjct: 81 EGSVGNKALVSPESSAEEEEEREEGGEACGLEGTGAGEDSVAPAAPGAGALSREGEEGTD 140
Query: 83 LYCEPH-----------KRIKEVLEEERHIK-RDECHIKNPAAVAVEGIWSIKRNLP 127
L E +++ EEE+ ++ EC +++ A EG++ LP
Sbjct: 141 LALEDEGEGCADEPGTLEQVSRSEEEEKLVQPHRECSLEDSGPWAGEGVFQSDLLLP 197
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 28.5 bits (62), Expect = 2.4
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 41 AVVAPEAGR---EEEQPPPPAGLGCGARG 66
A++APE GR E E PPP G G G G
Sbjct: 14 ALLAPETGRTVKEPEGPPPSPGKGGGGGG 42
>gi|239756433 PREDICTED: hypothetical protein [Homo sapiens]
Length = 513
Score = 28.5 bits (62), Expect = 2.4
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 19/86 (22%)
Query: 9 AGLPATELRRK----PC-----PGLSEDRCGMTGEEAVVVTAVVAPEAGRE-----EEQP 54
AG+ AT LRR+ P P L+ R G ++ AP A R P
Sbjct: 268 AGVVATGLRRRHRRPPAAAARRPLLAAARRGALPAPGALIGP--APRARRPLACTFANPP 325
Query: 55 PPPAGLGCGAR-GEPGRGPLEHGQQW 79
PPPAG G A GE RG E G W
Sbjct: 326 PPPAGCGSSAPIGEARRG--ERGDHW 349
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 28.5 bits (62), Expect = 2.4
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 12 PATELRRKPCPGLSEDRCGMTGEEAVVVTAVVAPEAGREEEQPPPPAGLGCGA 64
P++ R PG R G G V AV AP A PPPPA G A
Sbjct: 182 PSSSRRWAAMPGPGAPRPGAPGTWPVGF-AVAAPPAAAASVAPPPPAVAGAPA 233
>gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo
sapiens]
Length = 513
Score = 28.5 bits (62), Expect = 2.4
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 19/86 (22%)
Query: 9 AGLPATELRRK----PC-----PGLSEDRCGMTGEEAVVVTAVVAPEAGRE-----EEQP 54
AG+ AT LRR+ P P L+ R G ++ AP A R P
Sbjct: 268 AGVVATGLRRRHRRPPAAAARRPLLAAARRGALPAPGALIGP--APRARRPLACTFANPP 325
Query: 55 PPPAGLGCGAR-GEPGRGPLEHGQQW 79
PPPAG G A GE RG E G W
Sbjct: 326 PPPAGCGSSAPIGEARRG--ERGDHW 349
>gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo
sapiens]
Length = 513
Score = 28.5 bits (62), Expect = 2.4
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 19/86 (22%)
Query: 9 AGLPATELRRK----PC-----PGLSEDRCGMTGEEAVVVTAVVAPEAGRE-----EEQP 54
AG+ AT LRR+ P P L+ R G ++ AP A R P
Sbjct: 268 AGVVATGLRRRHRRPPAAAARRPLLAAARRGALPAPGALIGP--APRARRPLACTFANPP 325
Query: 55 PPPAGLGCGAR-GEPGRGPLEHGQQW 79
PPPAG G A GE RG E G W
Sbjct: 326 PPPAGCGSSAPIGEARRG--ERGDHW 349
>gi|150456465 tetratricopeptide repeat domain 9 [Homo sapiens]
Length = 222
Score = 28.5 bits (62), Expect = 2.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 44 APEAGREEEQPPPPAGLGCGARGEPGRG 71
+P A E ++PPPP + G G P RG
Sbjct: 15 SPPAAGEGQRPPPPLCVPGGGGGAPARG 42
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 28.5 bits (62), Expect = 2.4
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 7/28 (25%)
Query: 54 PPPPAGL-------GCGARGEPGRGPLE 74
PPPPA G G +GEPG GP E
Sbjct: 109 PPPPAAALDGAKADGLGGKGEPGGGPGE 136
>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
Length = 796
Score = 28.5 bits (62), Expect = 2.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 27 DRCGMTGEEAVVVTAVVAPEAGREEEQPPPPAGLG 61
+R G++ A A A E E PPPP LG
Sbjct: 147 ERYGLSAAAAAAAAAAAAVEQRSRFEYPPPPVSLG 181
>gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo
sapiens]
Length = 402
Score = 28.1 bits (61), Expect = 3.2
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
Query: 43 VAPEAGREEEQPPP-----PAGLGCGARGEPGRGP 72
VAP +E PPP PAG A G+ G GP
Sbjct: 72 VAPRCRGADELPPPPLPLQPAGQEVAAAGDSGEGP 106
>gi|21735552 mitogen-activated protein kinase kinase kinase 12 [Homo
sapiens]
Length = 859
Score = 27.7 bits (60), Expect = 4.1
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 7/38 (18%)
Query: 48 GREEEQPPPPAG-------LGCGARGEPGRGPLEHGQQ 78
G + +PPPP G LG G G GRG G Q
Sbjct: 659 GGAKGEPPPPVGPGEGVGLLGTGREGTSGRGGSRAGSQ 696
>gi|169161340 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 27.7 bits (60), Expect = 4.1
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 46 EAGREEEQP-PPPAGLGCGARGEPGRGPLEHGQQWKKFLYCEPHKRIKEVLEEERHIKRD 104
EAG E P PPPA RG PG + + K ++ E +R + L ++RD
Sbjct: 52 EAGSERSLPEPPPARF----RGAPGLSDVCCPRLGKGWVGKEQRRR-RWKLRAGAGVRRD 106
Query: 105 ECHIKNPAAVAVE--GIWSIKRNLPVGGLKPGLPSRNSLLP 143
+ P +E + R VGG+ PG P R S P
Sbjct: 107 VGGHRGPTVEGLERRAQERVPRGTRVGGVLPG-PRRGSCKP 146
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.137 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,477,801
Number of Sequences: 37866
Number of extensions: 476568
Number of successful extensions: 1747
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 1697
Number of HSP's gapped (non-prelim): 92
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.