Guide to the Human Genome
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Name: CBY3 Sequence: fasta or formatted (242aa) NCBI GI: 88986509
Description:

PREDICTED: chibby homolog 3 (Drosophila)

Referenced in:

Wnt Signals

Other entries for this name:
alt mRNA [242aa] PREDICTED: chibby homolog 3 (Drosophila)
alt mRNA [242aa] PREDICTED: chibby homolog 3 (Drosophila)
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         24           3
 C cysteine            1.7          4           1
 D aspartate           2.9          7           1
 E glutamate           4.5         11           2
 F phenylalanine       2.9          7           1
 G glycine             5.0         12           2
 H histidine           2.5          6           1
 I isoleucine          1.7          4           1
 K lysine              2.9          7           1
 L leucine            11.2         27           2
 M methionine          3.3          8           1
 N asparagine          2.1          5           2
 P proline             7.4         18           2
 Q glutamine           7.0         17           2
 R arginine           10.7         26           2
 S serine             10.7         26           2
 T threonine           6.2         15           2
 V valine              2.9          7           1
 W tryptophan          2.9          7           1
 Y tyrosine            1.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: chibby homolog 3 (Drosophila) 
CBY3                  1.000   PREDICTED: chibby homolog 3 (Drosophila) 
CBY3                  1.000   PREDICTED: chibby homolog 3 (Drosophila) 
CBY1                  0.136   PKD2 interactor, golgi and endoplasmic reticulum ass...
CBY1                  0.136   PKD2 interactor, golgi and endoplasmic reticulum asso...
SPERT                 0.038   spermatid associated 
MUC4                  0.015   mucin 4 isoform a 
LOC100130837          0.013   PREDICTED: hypothetical protein 
LOC100130837          0.013   PREDICTED: hypothetical protein 
KANK4                 0.013   ankyrin repeat domain 38 
LOC100292407          0.011   PREDICTED: hypothetical protein 
LOC100133714          0.011   PREDICTED: similar to Mucin-12, partial 
MUC12                 0.011   PREDICTED: mucin 12 
MUC12                 0.011   PREDICTED: mucin 12 
MUC12                 0.011   PREDICTED: mucin 12, cell surface associated 
CSF3R                 0.009   colony stimulating factor 3 receptor isoform b precu...
LOC100293644          0.009   PREDICTED: hypothetical protein 
LOC100287563          0.009   PREDICTED: hypothetical protein 
LOC100287563          0.009   PREDICTED: hypothetical protein XP_002343733 
SUV420H2              0.009   suppressor of variegation 4-20 homolog 2 
KLHL21                0.009   kelch-like 21 
TRAFD1                0.009   TRAF-type zinc finger domain containing 1 
TRAFD1                0.009   TRAF-type zinc finger domain containing 1 
TNRC6B                0.006   trinucleotide repeat containing 6B isoform 2 
CSF3R                 0.006   colony stimulating factor 3 receptor isoform d precu...
CSF3R                 0.006   colony stimulating factor 3 receptor isoform c precu...
TNRC6B                0.006   trinucleotide repeat containing 6B isoform 3 
CSF3R                 0.006   colony stimulating factor 3 receptor isoform a precur...
TNRC6B                0.006   trinucleotide repeat containing 6B isoform 1 
NFATC2                0.006   nuclear factor of activated T-cells, cytoplasmic, ca...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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