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Search of human proteins with 88853066
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens]
(485 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens] 1023 0.0
gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens] 888 0.0
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens] 68 2e-11
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 61 3e-09
gi|55956899 keratin 9 [Homo sapiens] 59 1e-08
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 57 5e-08
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 57 5e-08
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 55 1e-07
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 53 7e-07
gi|91208420 bassoon protein [Homo sapiens] 52 9e-07
gi|239744833 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06
gi|89276766 trophinin isoform 5 [Homo sapiens] 52 1e-06
gi|133922582 zinc finger protein 358 [Homo sapiens] 52 1e-06
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 52 2e-06
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 52 2e-06
gi|126352608 elastin isoform e precursor [Homo sapiens] 51 2e-06
gi|126352322 elastin isoform c precursor [Homo sapiens] 51 2e-06
gi|126352700 elastin isoform b precursor [Homo sapiens] 51 2e-06
gi|195972866 keratin 10 [Homo sapiens] 51 2e-06
gi|53829370 neuralized homolog 4 isoform 1 [Homo sapiens] 51 2e-06
gi|53829368 neuralized homolog 4 isoform 2 [Homo sapiens] 51 2e-06
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 51 3e-06
gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo ... 50 5e-06
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 50 5e-06
gi|169205935 PREDICTED: hypothetical protein [Homo sapiens] 50 5e-06
gi|126352446 elastin isoform d precursor [Homo sapiens] 50 6e-06
gi|126352440 elastin isoform a precursor [Homo sapiens] 50 6e-06
gi|169206147 PREDICTED: hypothetical protein [Homo sapiens] 49 8e-06
gi|239750526 PREDICTED: hypothetical protein [Homo sapiens] 49 8e-06
gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens] 49 8e-06
>gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens]
Length = 485
Score = 1023 bits (2645), Expect = 0.0
Identities = 485/485 (100%), Positives = 485/485 (100%)
Query: 1 METNESTEGSRSRSRSLDIQPSSEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAA 60
METNESTEGSRSRSRSLDIQPSSEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAA
Sbjct: 1 METNESTEGSRSRSRSLDIQPSSEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAA 60
Query: 61 TAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSC 120
TAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSC
Sbjct: 61 TAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSC 120
Query: 121 IAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG 180
IAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG
Sbjct: 121 IAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG 180
Query: 181 PGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPGFRNLVADRVPNYTSWSQHCPWEPQ 240
PGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPGFRNLVADRVPNYTSWSQHCPWEPQ
Sbjct: 181 PGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPGFRNLVADRVPNYTSWSQHCPWEPQ 240
Query: 241 KQPPWEFLQVLEPGARGLWKPPDIKGKLMVCYETLPRGQCLLYNWEEERATNHLDQVPSM 300
KQPPWEFLQVLEPGARGLWKPPDIKGKLMVCYETLPRGQCLLYNWEEERATNHLDQVPSM
Sbjct: 241 KQPPWEFLQVLEPGARGLWKPPDIKGKLMVCYETLPRGQCLLYNWEEERATNHLDQVPSM 300
Query: 301 QDGSESFFFRHGHRGLLTMQLKSPMPSSTTQKDSYQPPGNVYWPLRGKREAMLEMLLQHQ 360
QDGSESFFFRHGHRGLLTMQLKSPMPSSTTQKDSYQPPGNVYWPLRGKREAMLEMLLQHQ
Sbjct: 301 QDGSESFFFRHGHRGLLTMQLKSPMPSSTTQKDSYQPPGNVYWPLRGKREAMLEMLLQHQ 360
Query: 361 ICKEVQAEQEPTRKLFEVESVTHHDYRMELAQAGTPAPTKPHDYRQEQPETFWIQRAPQL 420
ICKEVQAEQEPTRKLFEVESVTHHDYRMELAQAGTPAPTKPHDYRQEQPETFWIQRAPQL
Sbjct: 361 ICKEVQAEQEPTRKLFEVESVTHHDYRMELAQAGTPAPTKPHDYRQEQPETFWIQRAPQL 420
Query: 421 PGVSNIRTLDTPFRKNCSFSTPVPLSLGKLLPYEPENYPYQLGEISSLPCPGGRLGGGGG 480
PGVSNIRTLDTPFRKNCSFSTPVPLSLGKLLPYEPENYPYQLGEISSLPCPGGRLGGGGG
Sbjct: 421 PGVSNIRTLDTPFRKNCSFSTPVPLSLGKLLPYEPENYPYQLGEISSLPCPGGRLGGGGG 480
Query: 481 RMTPF 485
RMTPF
Sbjct: 481 RMTPF 485
>gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens]
Length = 501
Score = 888 bits (2294), Expect = 0.0
Identities = 421/421 (100%), Positives = 421/421 (100%)
Query: 1 METNESTEGSRSRSRSLDIQPSSEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAA 60
METNESTEGSRSRSRSLDIQPSSEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAA
Sbjct: 1 METNESTEGSRSRSRSLDIQPSSEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAA 60
Query: 61 TAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSC 120
TAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSC
Sbjct: 61 TAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSC 120
Query: 121 IAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG 180
IAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG
Sbjct: 121 IAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG 180
Query: 181 PGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPGFRNLVADRVPNYTSWSQHCPWEPQ 240
PGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPGFRNLVADRVPNYTSWSQHCPWEPQ
Sbjct: 181 PGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPGFRNLVADRVPNYTSWSQHCPWEPQ 240
Query: 241 KQPPWEFLQVLEPGARGLWKPPDIKGKLMVCYETLPRGQCLLYNWEEERATNHLDQVPSM 300
KQPPWEFLQVLEPGARGLWKPPDIKGKLMVCYETLPRGQCLLYNWEEERATNHLDQVPSM
Sbjct: 241 KQPPWEFLQVLEPGARGLWKPPDIKGKLMVCYETLPRGQCLLYNWEEERATNHLDQVPSM 300
Query: 301 QDGSESFFFRHGHRGLLTMQLKSPMPSSTTQKDSYQPPGNVYWPLRGKREAMLEMLLQHQ 360
QDGSESFFFRHGHRGLLTMQLKSPMPSSTTQKDSYQPPGNVYWPLRGKREAMLEMLLQHQ
Sbjct: 301 QDGSESFFFRHGHRGLLTMQLKSPMPSSTTQKDSYQPPGNVYWPLRGKREAMLEMLLQHQ 360
Query: 361 ICKEVQAEQEPTRKLFEVESVTHHDYRMELAQAGTPAPTKPHDYRQEQPETFWIQRAPQL 420
ICKEVQAEQEPTRKLFEVESVTHHDYRMELAQAGTPAPTKPHDYRQEQPETFWIQRAPQL
Sbjct: 361 ICKEVQAEQEPTRKLFEVESVTHHDYRMELAQAGTPAPTKPHDYRQEQPETFWIQRAPQL 420
Query: 421 P 421
P
Sbjct: 421 P 421
>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
Length = 411
Score = 68.2 bits (165), Expect = 2e-11
Identities = 46/105 (43%), Positives = 50/105 (47%), Gaps = 24/105 (22%)
Query: 134 NPGPVPGSSSGPVLGSSSG--------------AGHGSGSGSGPGCGSVPG------SGS 173
NPGP+PG + GP+ G SG G SG SGP G +PG SG
Sbjct: 175 NPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISGPNPGPIPGPIPGPISGP 234
Query: 174 GPGPGSGPGSGPGHG--SGSHPGPASGPGPDTGPDSELSPCIPPG 216
PGP GP SGP G G PGP SGPGP GP SP PG
Sbjct: 235 NPGPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIP--SPAQIPG 277
Score = 65.5 bits (158), Expect = 1e-10
Identities = 41/87 (47%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 135 PGPVPGSSSGPVLGSSSGAGHGSGSG--SGPGCGSVPGSGSGPGPG------SGPGSGPG 186
PGP+PG SGP+ G + G G G SGP G +PG SGP PG GP SGPG
Sbjct: 204 PGPIPGPISGPISGPNPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPG 263
Query: 187 HGSGSHPGPASGPGPD--TGPDSELSP 211
G P PA PGP GP LSP
Sbjct: 264 PIIGPIPSPAQIPGPGRLQGPGPILSP 290
Score = 65.1 bits (157), Expect = 1e-10
Identities = 38/85 (44%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 134 NPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGC--GSVPGSGSGPGPGSGPGSGPGHGSGS 191
NPGP+PG GP+ G + G G SG PG G +PG SGPGP GP P G
Sbjct: 219 NPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPG- 277
Query: 192 HPGPASGPGPDTGPDSELSPCIPPG 216
PG GPGP P SP PG
Sbjct: 278 -PGRLQGPGPILSPGRMRSPGSLPG 301
Score = 63.5 bits (153), Expect = 4e-10
Identities = 44/96 (45%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 133 SNPGPVPGSSSGPVLGSSSGAGHGSG--------SGSGPGCGSVPGSGSGPGPGSGPGSG 184
S P P+PG SGP G + G G SG PG SVP G PGP SGP SG
Sbjct: 158 SGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGPISG 217
Query: 185 PGHG--SGSHPGPASG--PGPDTGPDSELSPCIPPG 216
P G G PGP SG PGP GP S +P + PG
Sbjct: 218 PNPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPG 253
Score = 58.9 bits (141), Expect = 1e-08
Identities = 37/82 (45%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 135 PGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPG 194
PGP G GP+ G + G SG SGP G +PG GP P GP SGP G S P
Sbjct: 146 PGPFRGPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIP--GPISGPIPGPISVPI 203
Query: 195 PASGPGPDTGPDSELSPCIPPG 216
P PGP +GP S +P PG
Sbjct: 204 PGPIPGPISGPISGPNPGPIPG 225
Score = 57.8 bits (138), Expect = 2e-08
Identities = 38/98 (38%), Positives = 40/98 (40%), Gaps = 28/98 (28%)
Query: 134 NPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGS-------------- 179
NPGP+PG SGP G G G SG GP G +P PGPG
Sbjct: 235 NPGPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMR 294
Query: 180 ------------GPGSGPGHGSGSHPGPASGPGPDTGP 205
GPGSGP GSGS P P GPG P
Sbjct: 295 SPGSLPGLAPILGPGSGP--GSGSVPAPIPGPGSLPAP 330
Score = 57.0 bits (136), Expect = 4e-08
Identities = 42/100 (42%), Positives = 47/100 (47%), Gaps = 18/100 (18%)
Query: 135 PGPVPGSSSGPVLGSSS----------GAGHGSGSGSGPGCGSVPGSGSGP----GPGSG 180
PGP+PGS GP+ G + G G GP G +PG SGP GP SG
Sbjct: 110 PGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISGPAPIPGPISG 169
Query: 181 PGSGPGHG--SGSHPGPASGP--GPDTGPDSELSPCIPPG 216
P SGP G G +PGP GP GP GP S P PG
Sbjct: 170 PFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPG 209
Score = 54.7 bits (130), Expect = 2e-07
Identities = 32/79 (40%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 135 PGPVPG--SSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSH 192
PGP+PG S GP++G G G G G + G PGS PG P G GS
Sbjct: 252 PGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPILSPGRMRSPGSLPGLAPILGPGSG 311
Query: 193 PGPASGPGPDTGPDSELSP 211
PG S P P GP S +P
Sbjct: 312 PGSGSVPAPIPGPGSLPAP 330
Score = 53.5 bits (127), Expect = 4e-07
Identities = 38/102 (37%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 135 PGPVPGSSSGPVLGSSSGAG--------HGSGSGSGPGCGSVPGSGSGPGPGSGPGSGP- 185
PGP+ G + GP+ G SG G SG GP G +P PGPG G GP
Sbjct: 228 PGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGPIIGPIPSPAQIPGPGRLQGPGPI 287
Query: 186 -----GHGSGSHPGPASGPGPDTGPDSELSPCIPPGFRNLVA 222
GS PG A GP +GP S P PG +L A
Sbjct: 288 LSPGRMRSPGSLPGLAPILGPGSGPGSGSVPAPIPGPGSLPA 329
Score = 52.4 bits (124), Expect = 9e-07
Identities = 36/90 (40%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 135 PGPVPGSSS--GPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGP----GPGSGPGSGPGHG 188
P P+PG + GP+ GS G G P +PG SGP GP GP GP G
Sbjct: 100 PAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISG 159
Query: 189 SGSHPGPASGP--GPDTGPDSELSPCIPPG 216
PGP SGP GP+ GP +P PG
Sbjct: 160 PAPIPGPISGPFSGPNPGPIPGPNPGPIPG 189
Score = 50.8 bits (120), Expect = 3e-06
Identities = 33/78 (42%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPG--SGSGPGPGSGPGSGPGHGS 189
S PGP+P GP G GS G PG +P PGP SGP PG
Sbjct: 93 SPGPGPIPAPIPGP--AQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFR 150
Query: 190 GSHPGPASGPGPDTGPDS 207
G PGP SGP P GP S
Sbjct: 151 GPIPGPISGPAPIPGPIS 168
Score = 40.4 bits (93), Expect = 0.004
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 144 GPVLGSSSGAGHGSGSGSGPGCGSVPGSGS--GPGPGSGPGSGPGHGSGSHPGPASGPGP 201
GP + G G GP +PG GP PGS PG PG P PA PGP
Sbjct: 79 GPGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGP 138
Query: 202 DTGP 205
+GP
Sbjct: 139 ISGP 142
Score = 37.7 bits (86), Expect = 0.024
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 139 PGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGS--GSGPGPGSGPGSGPGHGSGSHPGPA 196
PG + + ++ G G PG +PG GS PGP GP P PGP
Sbjct: 80 PGCRAQKGIPAALSPGPGPIPAPIPGPAQIPGPLPGSIPGPIPGPAQIPSPIPAPIPGPI 139
Query: 197 SGP--------GPDTGPDSELSPCIPP 215
SGP GP GP S +P P
Sbjct: 140 SGPVQIPGPFRGPIPGPISGPAPIPGP 166
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 60.8 bits (146), Expect = 3e-09
Identities = 31/70 (44%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 135 PGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPG 194
PG + S P L +GAG + G G PG G GPG G GPG GPG G G PG
Sbjct: 113 PGDLLDHISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPG 172
Query: 195 PASGPGPDTG 204
G GP G
Sbjct: 173 -GGGGGPGGG 181
Score = 53.9 bits (128), Expect = 3e-07
Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 130 DHSSNPGP--VPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGH 187
DH S+P + G+ GA G G G GPG G PG G G G G GPG G G
Sbjct: 118 DHISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGG 177
Query: 188 GSGSHPGPASGPGP 201
G G ++ P P
Sbjct: 178 PGGGLLGGSAHPHP 191
Score = 45.1 bits (105), Expect = 1e-04
Identities = 28/72 (38%), Positives = 30/72 (41%), Gaps = 11/72 (15%)
Query: 139 PGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGH------GSGSH 192
PG GP G G G G G G GPG G G GPG G GS H G SH
Sbjct: 147 PGGGGGPGGGGGPGGGPGGGGGGGPG-----GGGGGPGGGLLGGSAHPHPHMHSLGHLSH 201
Query: 193 PGPASGPGPDTG 204
P A+ +G
Sbjct: 202 PAAAAAMNMPSG 213
Score = 33.1 bits (74), Expect = 0.58
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 21 PSSEGLGPTSEPFPSS-----DDSPRSALAAATAAAAAAASAAAATAAFTTAKAAALSTK 75
P LG S P ++ P L AA A AAA+AAAA A A +AA +
Sbjct: 191 PHMHSLGHLSHPAAAAAMNMPSGLPHPGLVAAAAHHGAAAAAAAAAAGQVAAASAAAAVV 250
Query: 76 TPAPCSEFMEPSSDP 90
A + + +DP
Sbjct: 251 GAAGLASICDSDTDP 265
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/72 (47%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGS----GPGSGPGHGSGSHPGP 195
G S G G SG G+G GSGS G G G GSG G GS G GSG GH GS G
Sbjct: 491 GGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGH 550
Query: 196 ASGPGPDTGPDS 207
+ G G + G S
Sbjct: 551 SGGSGGNYGGGS 562
Score = 55.5 bits (132), Expect = 1e-07
Identities = 30/69 (43%), Positives = 31/69 (44%)
Query: 136 GPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGP 195
G G SG G SG GH GSG G GS G G G G G G G G GSGS G
Sbjct: 523 GSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGS 582
Query: 196 ASGPGPDTG 204
G +G
Sbjct: 583 GGSHGGGSG 591
Score = 52.4 bits (124), Expect = 9e-07
Identities = 31/70 (44%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 140 GSSSGPVLGSS-----SGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPG 194
G S G G S SG +G GSGSG G G G GSG G G G G GSG + G
Sbjct: 500 GGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYG 559
Query: 195 PASGPGPDTG 204
SG G +G
Sbjct: 560 GGSGSGGGSG 569
Score = 51.6 bits (122), Expect = 2e-06
Identities = 34/80 (42%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 131 HSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPG--SGPGHG 188
HS G SG G SG+G GSG G G G GS GSG G GSG G SG +G
Sbjct: 542 HSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYG 601
Query: 189 SGSH-PGPASGPGPDTGPDS 207
G G G G +G S
Sbjct: 602 GGEEASGSGGGYGGGSGKSS 621
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/70 (45%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSG--SGPGPGSGPGSGPGHGSGSHPGPAS 197
GS S G S G G GSG GSG G G G G G G G GSG +G GS G S
Sbjct: 509 GSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGS 568
Query: 198 GPGPDTGPDS 207
G G G S
Sbjct: 569 GGGYGGGSGS 578
Score = 49.7 bits (117), Expect = 6e-06
Identities = 31/69 (44%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGS 191
S + G GS G GS SG G G G G G G G GSG G GSG G G GSG
Sbjct: 510 SGSRGGSGGSYGG---GSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGG 566
Query: 192 HPGPASGPG 200
G G G
Sbjct: 567 GSGGGYGGG 575
Score = 48.9 bits (115), Expect = 1e-05
Identities = 29/65 (44%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 140 GSSSGPVLGSSSGAG--HGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPAS 197
G S G G S G+G +G GSGSG G G G GSG GSG G G G G G +
Sbjct: 541 GHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSY 600
Query: 198 GPGPD 202
G G +
Sbjct: 601 GGGEE 605
Score = 47.8 bits (112), Expect = 2e-05
Identities = 31/74 (41%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGS------GPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHP 193
G S G GS G+G G G GS G G G GSG G GSG G G G G G
Sbjct: 517 GGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGS 576
Query: 194 GPASGPGPDTGPDS 207
G G G G S
Sbjct: 577 GSRGGSGGSHGGGS 590
Score = 47.4 bits (111), Expect = 3e-05
Identities = 35/80 (43%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 133 SNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHG---S 189
S G GS G GS G GSGSG G G G GSGS G G G G G G
Sbjct: 538 SGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESG 597
Query: 190 GSHPG--PASGPGPDTGPDS 207
GS+ G ASG G G S
Sbjct: 598 GSYGGGEEASGSGGGYGGGS 617
Score = 43.9 bits (102), Expect = 3e-04
Identities = 27/56 (48%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 140 GSSSGPVLGSSSGAGHGSGS-----GSGPGCGSVPGSGSGPGPGSGPGSGPGHGSG 190
G S G SS G G G GS SG G S G G G G GSG G G G+GSG
Sbjct: 75 GGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSG 130
Score = 43.5 bits (101), Expect = 4e-04
Identities = 26/61 (42%), Positives = 26/61 (42%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
G S G S G GS G G G G GSGS G G G G G G GS G G
Sbjct: 479 GGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGS 538
Query: 200 G 200
G
Sbjct: 539 G 539
Score = 42.7 bits (99), Expect = 7e-04
Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGS 191
SS G G S G G +SG G+ S G G G G G G G G GSG G G G G+
Sbjct: 84 SSLGGGFGGGSRG--FGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGA 141
Query: 192 HPG 194
G
Sbjct: 142 GGG 144
Score = 42.4 bits (98), Expect = 0.001
Identities = 24/49 (48%), Positives = 26/49 (53%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHG 188
G +SG SS G G G G GSG G G GSG G G G G+G G G
Sbjct: 98 GGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDG 146
Score = 42.4 bits (98), Expect = 0.001
Identities = 30/73 (41%), Positives = 30/73 (41%), Gaps = 11/73 (15%)
Query: 131 HSSNPGPVPGSSSGPVLGSSSGAGHGSGS--------GSGPGCGSVPGSGSGPG---PGS 179
HS G G SG GS G G GSGS G G G G G G G GS
Sbjct: 550 HSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGS 609
Query: 180 GPGSGPGHGSGSH 192
G G G G G SH
Sbjct: 610 GGGYGGGSGKSSH 622
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/73 (36%), Positives = 29/73 (39%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGS 191
SS G + G GS G GS G GS G G G G G G G GSGS
Sbjct: 467 SSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGS 526
Query: 192 HPGPASGPGPDTG 204
G G G +G
Sbjct: 527 GGGSGGGYGGGSG 539
Score = 38.9 bits (89), Expect = 0.011
Identities = 24/51 (47%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSG 190
G+S G G SS G G G G G G G G GSG G G G G G G G
Sbjct: 99 GASGG---GYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDG 146
Score = 37.4 bits (85), Expect = 0.031
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 132 SSNPGPVPGSSS--GPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGS 189
SS+ G GSS G G S G +G GSG G S+ G G G G SG G+ S
Sbjct: 48 SSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSS 107
Query: 190 GSHPGPASGPGPDTG 204
G G G G
Sbjct: 108 SGGFGGGFGGGSGGG 122
Score = 35.8 bits (81), Expect = 0.090
Identities = 25/68 (36%), Positives = 26/68 (38%)
Query: 133 SNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSH 192
S G S G G S G G SG G G G G G G G G G G G G
Sbjct: 77 SGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGG 136
Query: 193 PGPASGPG 200
G +G G
Sbjct: 137 FGGGAGGG 144
Score = 35.0 bits (79), Expect = 0.15
Identities = 29/66 (43%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 140 GSSSGPVLGSSSGAGHGS----GSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHP-G 194
G G SSSG G GS G G G G G GSG G S G G G GS G
Sbjct: 40 GGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSG-GGFSASSLGGGFGGGSRGFG 98
Query: 195 PASGPG 200
ASG G
Sbjct: 99 GASGGG 104
Score = 32.7 bits (73), Expect = 0.76
Identities = 23/56 (41%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 152 GAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTGPDS 207
G G GSG G GS GSG GS G G G G G G G G G S
Sbjct: 474 GLGGRGGSGGSYGRGSRGGSG-----GSYGGGGSGGGYGGGSGSRGGSGGSYGGGS 524
Score = 32.3 bits (72), Expect = 0.99
Identities = 25/58 (43%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 149 SSSGAGHGSG-----SGSGPGCGSVPGSGSGPGPGSGPGSGPGHG-SGSHPGPASGPG 200
SSSG G G G SG G G V G G G G G G G G S S G G G
Sbjct: 36 SSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGG 93
Score = 32.0 bits (71), Expect = 1.3
Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Query: 149 SSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPG---SGPGHGSGSHPGPASGPGPDTG 204
S SG G G G GSG S S G G G G S G+G GS G G G
Sbjct: 12 SRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFG 70
Score = 30.4 bits (67), Expect = 3.8
Identities = 28/71 (39%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 141 SSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSG---SGPGPGSGPGS-GPGHGSGSHPGPA 196
SSSG GSS G G G G G G G S G G G GS G G SG +
Sbjct: 49 SSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSS 108
Query: 197 SGPGPDTGPDS 207
G G G S
Sbjct: 109 GGFGGGFGGGS 119
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 56.6 bits (135), Expect = 5e-08
Identities = 66/206 (32%), Positives = 82/206 (39%), Gaps = 31/206 (15%)
Query: 25 GLGPTSEPFPS----SDDSPRSALAAATAAAAAAASAAAATAAFTTAKAAALSTKTPAPC 80
G+G S P S P SA+ +A A SA +A + +K
Sbjct: 659 GVGLPSAGLPGAGLPSTGLPGSAITSAGLPGAGMPSAGIPSAGGEEHAFLTVGSKEANNG 718
Query: 81 SEFMEPSS--DPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSCIAQDTCTTTDHSSNPG-- 136
F P + + G P PG + G+ G A+ + +S PG
Sbjct: 719 PPFNFPGNFGGSNAFGPPIPPPG----LGGGAFGD--------ARPGMPSVGNSGLPGLG 766
Query: 137 -PVPGSSSGPV-LGSSSGAGHGSGS-GSGPGC-GSVPGSGSGPGPGSGPGSGPGHGSGSH 192
VPG GP L SG G G + G+GPG G PG GSGP G GS PGH G
Sbjct: 767 LDVPGFGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGSGP---PGLGSAPGHLGGPP 823
Query: 193 P-GPASGPGPDTGPDSELSPCIPPGF 217
GP GPGP GP + PPGF
Sbjct: 824 AFGPGPGPGPGPGP---IHIGGPPGF 846
Score = 45.1 bits (105), Expect = 1e-04
Identities = 36/73 (49%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query: 134 NPGPVPGSSSGPVLGSSSGAGHGS-GSGSGPG-CGSVPGSGSGPGPGSGPGSGPGHGSGS 191
N G PGS GP G G G G GS PG G P G GPGP GPG GP H G
Sbjct: 791 NFGNGPGSLGGP-----PGFGSGPPGLGSAPGHLGGPPAFGPGPGP--GPGPGPIH-IGG 842
Query: 192 HPGPASG---PGP 201
PG AS PGP
Sbjct: 843 PPGFASSSGKPGP 855
Score = 30.4 bits (67), Expect = 3.8
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 20/100 (20%)
Query: 137 PVPGSSSGPVLGSSSGAGHGSGSGSGPGCG----SVPGSG--SGPGPGSG-PGSG-PGHG 188
PVPG+ + P + ++ G G S PG G +PGS S PG+G P +G P G
Sbjct: 642 PVPGNPAVPGMPNAGLPGVGLPSAGLPGAGLPSTGLPGSAITSAGLPGAGMPSAGIPSAG 701
Query: 189 SGSHP------------GPASGPGPDTGPDSELSPCIPPG 216
H P + PG G ++ P PPG
Sbjct: 702 GEEHAFLTVGSKEANNGPPFNFPGNFGGSNAFGPPIPPPG 741
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 56.6 bits (135), Expect = 5e-08
Identities = 66/206 (32%), Positives = 82/206 (39%), Gaps = 31/206 (15%)
Query: 25 GLGPTSEPFPS----SDDSPRSALAAATAAAAAAASAAAATAAFTTAKAAALSTKTPAPC 80
G+G S P S P SA+ +A A SA +A + +K
Sbjct: 659 GVGLPSAGLPGAGLPSTGLPGSAITSAGLPGAGMPSAGIPSAGGEEHAFLTVGSKEANNG 718
Query: 81 SEFMEPSS--DPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSCIAQDTCTTTDHSSNPG-- 136
F P + + G P PG + G+ G A+ + +S PG
Sbjct: 719 PPFNFPGNFGGSNAFGPPIPPPG----LGGGAFGD--------ARPGMPSVGNSGLPGLG 766
Query: 137 -PVPGSSSGPV-LGSSSGAGHGSGS-GSGPGC-GSVPGSGSGPGPGSGPGSGPGHGSGSH 192
VPG GP L SG G G + G+GPG G PG GSGP G GS PGH G
Sbjct: 767 LDVPGFGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGSGP---PGLGSAPGHLGGPP 823
Query: 193 P-GPASGPGPDTGPDSELSPCIPPGF 217
GP GPGP GP + PPGF
Sbjct: 824 AFGPGPGPGPGPGP---IHIGGPPGF 846
Score = 45.1 bits (105), Expect = 1e-04
Identities = 36/73 (49%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query: 134 NPGPVPGSSSGPVLGSSSGAGHGS-GSGSGPG-CGSVPGSGSGPGPGSGPGSGPGHGSGS 191
N G PGS GP G G G G GS PG G P G GPGP GPG GP H G
Sbjct: 791 NFGNGPGSLGGP-----PGFGSGPPGLGSAPGHLGGPPAFGPGPGP--GPGPGPIH-IGG 842
Query: 192 HPGPASG---PGP 201
PG AS PGP
Sbjct: 843 PPGFASSSGKPGP 855
Score = 30.4 bits (67), Expect = 3.8
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 20/100 (20%)
Query: 137 PVPGSSSGPVLGSSSGAGHGSGSGSGPGCG----SVPGSG--SGPGPGSG-PGSG-PGHG 188
PVPG+ + P + ++ G G S PG G +PGS S PG+G P +G P G
Sbjct: 642 PVPGNPAVPGMPNAGLPGVGLPSAGLPGAGLPSTGLPGSAITSAGLPGAGMPSAGIPSAG 701
Query: 189 SGSHP------------GPASGPGPDTGPDSELSPCIPPG 216
H P + PG G ++ P PPG
Sbjct: 702 GEEHAFLTVGSKEANNGPPFNFPGNFGGSNAFGPPIPPPG 741
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 55.5 bits (132), Expect = 1e-07
Identities = 31/92 (33%), Positives = 36/92 (39%), Gaps = 11/92 (11%)
Query: 128 TTDHSSNPGPVPGSSSGPVLGSSSGA-----------GHGSGSGSGPGCGSVPGSGSGPG 176
++ HSS G G G S G G+ G G G G PG G G G
Sbjct: 512 SSSHSSGGNQCSGEGQGSRGGQGSNGQGSGGNQCSRDGQGTAGGHGSGGGQRPGGGHGSG 571
Query: 177 PGSGPGSGPGHGSGSHPGPASGPGPDTGPDSE 208
G GPG G G G G + G G G G D +
Sbjct: 572 GGQGPGDGHGSGGGKNSGGGKGSGSGKGSDGD 603
Score = 49.3 bits (116), Expect = 8e-06
Identities = 42/129 (32%), Positives = 44/129 (34%), Gaps = 8/129 (6%)
Query: 87 SSDPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSCIAQDTCTTTDHSSNPGPVPGSSSGPV 146
SS S G C+G G GS G C T H S G PG G
Sbjct: 512 SSSHSSGGNQCSGEGQGSRGGQGSNGQGSGGNQCSRDGQGTAGGHGSGGGQRPGGGHGSG 571
Query: 147 LGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTGPD 206
G G GHGSG G SG G G GSG GS G S G T
Sbjct: 572 GGQGPGDGHGSGGGK--------NSGGGKGSGSGKGSDGDGERGKSLKKRSYFGKLTQSK 623
Query: 207 SELSPCIPP 215
+ P PP
Sbjct: 624 QQQMPPPPP 632
Score = 38.1 bits (87), Expect = 0.018
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 11/77 (14%)
Query: 140 GSSSGPVLGSSSGAGHGSGSG--SGPGCGSVPG---SGSGPG------PGSGPGSGPGHG 188
GS G + H SG SG G GS G +G G G G G G G G
Sbjct: 500 GSGGGQGSNGQGSSSHSSGGNQCSGEGQGSRGGQGSNGQGSGGNQCSRDGQGTAGGHGSG 559
Query: 189 SGSHPGPASGPGPDTGP 205
G PG G G GP
Sbjct: 560 GGQRPGGGHGSGGGQGP 576
Score = 33.5 bits (75), Expect = 0.44
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 138 VPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGP-GHGSGSH 192
V GS SG + G GSG + GSG G GSG G G G GS SH
Sbjct: 460 VSGSGSGNFGEEGNPQGKEDQEGSGGDYMPMNNWGSGNGRGSGGGQGSNGQGSSSH 515
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 26 LGPTSEPFPSSDDSPRSALAAATAAAAAAAS-----AAAATAAFTTAKAAALSTKTPAPC 80
L P+S P +S P AL+ AAA+A A+ AAAA A F +A A A
Sbjct: 1112 LSPSSAPAVASAAEPTLALSQVVAAASALAAAPGIGAAAAAAGFDSASARWFQPVANAAD 1171
Query: 81 SEFMEPSSD 89
+E + + D
Sbjct: 1172 AEAVRGAQD 1180
Score = 31.2 bits (69), Expect = 2.2
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 149 SSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPG 200
S SG+G+ G+ G GSG P + GSG G GSG G ++G G
Sbjct: 461 SGSGSGNFGEEGNPQGKEDQEGSGGDYMPMNNWGSGNGRGSGGGQG-SNGQG 511
Score = 29.3 bits (64), Expect = 8.4
Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 13/111 (11%)
Query: 134 NPGPVPGSSSGPVLGSSSGAGHGSGSGS----GPGCGSVPGSGSGPGPGSGPGSGPGHGS 189
+P P P P + PG G++P + P GS S + S
Sbjct: 751 SPPPAPSPPKAPDTNKEDDSKDNDSESDYMFMAPGAGAIPKNPRNPQGGSSSKSWSSYFS 810
Query: 190 GSHPGPASGPGPDTGPDSELSPCIPPGFRNLVADRVPNYTSWSQHCPWEPQ 240
+P +S G + +SE P +P F D+ +Y W+P+
Sbjct: 811 LPNPFRSSPLGQN--DNSEYVPMLPGKFLGRGLDKEVSYN-------WDPK 852
>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
Length = 1388
Score = 52.8 bits (125), Expect = 7e-07
Identities = 79/306 (25%), Positives = 109/306 (35%), Gaps = 68/306 (22%)
Query: 8 EGSRSRSRSLDIQPSSEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAATAAFTTA 67
E S LD+ S++ LG + PSS+DS AAA+ + + F
Sbjct: 427 EASGVAPGELDLSMSAQSLGEEATVGPSSEDS----------LTTAAAATEVSLSTFEDE 476
Query: 68 KAAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPGFTHNIAHGSL--------GFE----- 114
+A+ + T AP + M P + +GPG ++A + G E
Sbjct: 477 EASGVPTDGLAPLTATMAPERAVT------SGPGDEEDLAAATTEEPLITAGGEESGSPP 530
Query: 115 ----PVYVSCIAQDTCTTTDHSSNPG---------------------PVPGSSSGPVLGS 149
P+ + +A + T + G P P GP G+
Sbjct: 531 PDGPPLPLPTVAPERWITPAQREHVGMKGQAGPKGEKGDAGEELPGPPEPSGPVGPTAGA 590
Query: 150 S---SGAGHGS--GSGSGPGCGS---VPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGP 201
SG G GS GSGSG GS + G PGP PG G+ GP PG
Sbjct: 591 EAEGSGLGWGSDVGSGSGDLVGSEQLLRGPPGPPGPPGLPGIPGKPGTDVFMGPPGSPGE 650
Query: 202 DTGPDSELSPCIPPGFRNLVADRVPNYTSWSQHCPWEPQKQPPWEFLQVLEPGARGLWKP 261
D GP E P P G V T + + P + +PG RGL P
Sbjct: 651 D-GPAGEPGPPGPEG-----QPGVDGATGLPGMKGEKGARGPNGSVGEKGDPGNRGLPGP 704
Query: 262 PDIKGK 267
P KG+
Sbjct: 705 PGKKGQ 710
Score = 33.9 bits (76), Expect = 0.34
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
G +G L S G+ +G +V G PG PG PG G PGP P
Sbjct: 1043 GDINGSFLMSGPPGLPGNPGPAGQKGETVVGPQGPPGAPGLPGP-PGFGRPGDPGPPGPP 1101
Query: 200 GPDTGPDSELSPCI----PPG 216
GP GP + L + PPG
Sbjct: 1102 GP-PGPPAILGAAVALPGPPG 1121
Score = 33.5 bits (75), Expect = 0.44
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 9/77 (11%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAG--HGSGSGSGPGCGSV-----PGSGSGPGPGSGPGSG 184
+ PGP PG P + ++G G GP GSV PG+ PGP G
Sbjct: 654 AGEPGP-PGPEGQPGVDGATGLPGMKGEKGARGPN-GSVGEKGDPGNRGLPGPPGKKGQA 711
Query: 185 PGHGSGSHPGPASGPGP 201
G PGP PGP
Sbjct: 712 GPPGVMGPPGPPGPPGP 728
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 52.4 bits (124), Expect = 9e-07
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
G+ GP+ GAG G G G GPG G P + +G G G+ PGP GP
Sbjct: 10 GAGDGPL--PPGGAGPGPGPGPGPGAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPGPGP 67
Query: 200 GPDTGPDS---ELSPCIPPGFRNLVA--DRVPNYTSWSQHCPWEPQKQPP 244
GP GP S L P P G + + + + T+ P E + Q P
Sbjct: 68 GPGPGPGSTSRRLDPKEPLGNQRAASPTPKQASATTPGHESPRETRAQGP 117
Score = 50.4 bits (119), Expect = 4e-06
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 136 GPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSG--------PGPGSGPGSGPGH 187
GP+P +GP G G G G + G G +P +G+ PGPG GPG GPG
Sbjct: 14 GPLPPGGAGPGPGPGPGPGAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPGPGPGPGPGP 73
Query: 188 GSGS 191
GS S
Sbjct: 74 GSTS 77
Score = 50.4 bits (119), Expect = 4e-06
Identities = 47/187 (25%), Positives = 61/187 (32%), Gaps = 33/187 (17%)
Query: 20 QPSSEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAATAAFTTAKAAALSTKTPAP 79
QP T+EP P + ++P A + A A A T T K L
Sbjct: 305 QPPQPTKPSTAEPRPPAGEAP----AKSATAVPAGLGATEQTQEGLTGKLFGLGASLLTQ 360
Query: 80 CSEFMEPSSDPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSCIAQDTCTTTDHSSNPGPVP 139
S M + G+P G + + D S GP P
Sbjct: 361 ASTLMSVQPEADTQGQPAPSKGTPKIVFN---------------------DASKEAGPKP 399
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
LGS G G G+ + PG PGSG G P +G + P HG H +
Sbjct: 400 -------LGSGPGPGPAPGAKTEPGARMGPGSGPGALPKTGGTTSPKHGRAEHQAASKAA 452
Query: 200 G-PDTGP 205
P T P
Sbjct: 453 AKPKTMP 459
Score = 47.4 bits (111), Expect = 3e-05
Identities = 56/202 (27%), Positives = 72/202 (35%), Gaps = 23/202 (11%)
Query: 5 ESTEGSRSRSRSLDIQPS-SEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAATAA 63
+ T RS+S+ P+ S P +P D RS + A A AT+
Sbjct: 229 DMTTAPRSKSQQQLHSPALSPAHSPAKQPL-GKPDQERSRGPGGPQPGSRQAETARATSV 287
Query: 64 FTTAKAAA------LSTKTPAPCSEFMEPSSDP-------SLLGEPCAGPGFTHNIAHG- 109
A+AAA +S + P P P S P AG G T G
Sbjct: 288 PGPAQAAAPPEVGRVSPQPPQPTKPSTAEPRPPAGEAPAKSATAVP-AGLGATEQTQEGL 346
Query: 110 -----SLGFEPVYVSCIAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPG 164
LG + + D P P G+ +S AG GSGPG
Sbjct: 347 TGKLFGLGASLLTQASTLMSVQPEADTQGQPAPSKGTPKIVFNDASKEAGP-KPLGSGPG 405
Query: 165 CGSVPGSGSGPGPGSGPGSGPG 186
G PG+ + PG GPGSGPG
Sbjct: 406 PGPAPGAKTEPGARMGPGSGPG 427
Score = 43.9 bits (102), Expect = 3e-04
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 135 PGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSG 184
PGP PG +G + +G G +G+ P G GPGPG GPG G
Sbjct: 25 PGPGPGPGAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPGPGPGPGPGPG 74
Score = 38.1 bits (87), Expect = 0.018
Identities = 61/241 (25%), Positives = 90/241 (37%), Gaps = 49/241 (20%)
Query: 20 QPSSEGLG-----PTSEPFPSSDDSPRSALAAATAAAAAAASAAAATA---AFTTAKAAA 71
+P + LG P S+P S+ P+ ++A + + A++A A + K +
Sbjct: 3668 KPHARDLGRHEARPHSQP-SSAPAMPKKGQPGYPSSAEYSQPSRASSAYHHASDSKKGSR 3726
Query: 72 LSTKTPAPCSEFMEPSSDPSLLGEPCAGPG-------FTHNIAHGS-------------L 111
+ PA EP + P L G A PG + I G+ L
Sbjct: 3727 QAHSGPAALQSKAEPQAQPQLQGRQAA-PGPQQSQSPSSRQIPSGAASRQPQTQQQQQGL 3785
Query: 112 GFEPVYVSC----IAQDTCTTTDHSS--------NPGPVPGSSSGPVLGSSSGAGHGSGS 159
G +P + + Q + TT S+ P P P +++GP A +GS
Sbjct: 3786 GLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTNGS 3845
Query: 160 ---GSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPG-PASGPGPDTGPDSELSPCIPP 215
P G P + PGPG G G G PG PA PG D +S S +P
Sbjct: 3846 KGTAKAPQQGRAPQAQPAPGPGPA-GVKAGARPGGTPGAPAGQPGAD--GESVFSKILPG 3902
Query: 216 G 216
G
Sbjct: 3903 G 3903
Score = 32.0 bits (71), Expect = 1.3
Identities = 35/134 (26%), Positives = 37/134 (27%), Gaps = 55/134 (41%)
Query: 136 GPVPGSSSGPVLGSSSGAGHGSGS----------------GSGPGCGSVPGSGS------ 173
GP PG GP G A G G G GPG G PG GS
Sbjct: 22 GPGPGPGPGPGAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPGPGPGPGPGPGSTSRRLD 81
Query: 174 -----------GPGPGSGPGSGPGHGSGSH---PGPA-------------------SGPG 200
P P + PGH S GPA SG
Sbjct: 82 PKEPLGNQRAASPTPKQASATTPGHESPRETRAQGPAGQEADGPRRTLQVDSRTQRSGRS 141
Query: 201 PDTGPDSELSPCIP 214
P PD +P P
Sbjct: 142 PSVSPDRGSTPTSP 155
>gi|239744833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 129
Score = 52.0 bits (123), Expect = 1e-06
Identities = 34/76 (44%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 129 TDHSSNPGPVPGSSSGPVLGSSSGAGHGS----GSGSGPGCGSVPGSGSGPGPGSGPGSG 184
T +S G GS G GSS G G+G+ G GSG CG GSG G G G G G G
Sbjct: 38 TGYSCGYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGYSCGYGSGSGCGYGTGFGCGYG 97
Query: 185 PGHGSGSHPGPASGPG 200
G+G+G G SG G
Sbjct: 98 CGYGTGYGCGCGSGSG 113
Score = 48.5 bits (114), Expect = 1e-05
Identities = 29/74 (39%), Positives = 36/74 (48%)
Query: 131 HSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSG 190
+ S+ G GS G GSS G G+G+G G GCG G G G G G G G G+ G
Sbjct: 12 YGSSYGCGYGSGYGYGYGSSYGCGYGTGYSCGYGCGYGSGYGCGYGSSYGCGYGTGYSCG 71
Query: 191 SHPGPASGPGPDTG 204
G + G G +G
Sbjct: 72 YGSGYSCGYGSGSG 85
Score = 45.8 bits (107), Expect = 9e-05
Identities = 31/65 (47%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGC--GSVPGSGSGPGPGSGPGSG--PGHGSGSHPGP 195
GSS G G+ G+G G GSG GC GS G G G G G GSG G+GSGS G
Sbjct: 29 GSSYGCGYGTGYSCGYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGYSCGYGSGSGCGY 88
Query: 196 ASGPG 200
+G G
Sbjct: 89 GTGFG 93
Score = 45.1 bits (105), Expect = 1e-04
Identities = 26/57 (45%), Positives = 29/57 (50%)
Query: 148 GSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTG 204
GS G G+GS G G G G G GSG G G GSG G+G+G G G G G
Sbjct: 49 GSGYGCGYGSSYGCGYGTGYSCGYGSGYSCGYGSGSGCGYGTGFGCGYGCGYGTGYG 105
Score = 43.9 bits (102), Expect = 3e-04
Identities = 26/68 (38%), Positives = 30/68 (44%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
G G G G+ +G G G+G CG G G G GSG G G G G G G +G
Sbjct: 45 GCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGYSCGYGSGSGCGYGTGFGCGYGCGYGTGY 104
Query: 200 GPDTGPDS 207
G G S
Sbjct: 105 GCGCGSGS 112
Score = 43.5 bits (101), Expect = 4e-04
Identities = 29/67 (43%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 144 GPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDT 203
G G G+G+G G GS GCG G+G G G G GSG G G GS G G G
Sbjct: 13 GSSYGCGYGSGYGYGYGSSYGCGY--GTGYSCGYGCGYGSGYGCGYGSSYGCGYGTGYSC 70
Query: 204 GPDSELS 210
G S S
Sbjct: 71 GYGSGYS 77
Score = 42.0 bits (97), Expect = 0.001
Identities = 30/65 (46%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
G+S G GSS G G+GSG G G GS G G G G G G G G G G G + G
Sbjct: 7 GNSCG--YGSSYGCGYGSGY--GYGYGSSYGCGYGTGYSCGYGCGYGSGYGCGYGSSYGC 62
Query: 200 GPDTG 204
G TG
Sbjct: 63 GYGTG 67
Score = 41.6 bits (96), Expect = 0.002
Identities = 24/48 (50%), Positives = 25/48 (52%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGH 187
G S G G S G G GSG G G G G G G G G G G GSG G+
Sbjct: 67 GYSCGYGSGYSCGYGSGSGCGYGTGFGCGYGCGYGTGYGCGCGSGSGY 114
>gi|89276766 trophinin isoform 5 [Homo sapiens]
Length = 1431
Score = 52.0 bits (123), Expect = 1e-06
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 127 TTTDHSSNPGPVPGSSSGP--VLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSG 184
T+T + P G SSGP ++G S G G G SGP S G GP G+G G G
Sbjct: 1343 TSTGFTGEPSTSTGFSSGPSSIVGFSGGPSTGVGFCSGP---STSGFSGGPSTGAGFGGG 1399
Query: 185 PGHGSGSHPGPASGPGPDTGPDS 207
P G+G GP++ G +G S
Sbjct: 1400 PNTGAGFGGGPSTSAGFGSGAAS 1422
Score = 40.4 bits (93), Expect = 0.004
Identities = 63/230 (27%), Positives = 87/230 (37%), Gaps = 30/230 (13%)
Query: 1 METNESTEGSRSRSRSLDIQPS-SEGLGP---TSEPFP---SSDDSPRSALAAATAAAAA 53
+ TN G+ S S PS S G G T+ F S+ S A++ + + A
Sbjct: 1033 VSTNTDFGGTLSTSVCFGGSPSTSAGFGGALNTNASFGCAVSTSASFSGAVSTSACFSGA 1092
Query: 54 AASAAAATAAFTTAKA--AALSTK-----TPAPCSEF-MEPSSDPSLLGEP----CAGPG 101
+ AF+T+ ALST TP+ F PS+ S G C G
Sbjct: 1093 PITNPGFGGAFSTSAGFGGALSTAADFGGTPSNSIGFGAAPSTSVSFGGAHGTSLCFGGA 1152
Query: 102 FTHNIAHGS-------LGFEPVYVSCIAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAG 154
+ ++ GS G P +C + T+ P G S G G S+ AG
Sbjct: 1153 PSTSLCFGSASNTNLCFGGPPSTSACFSG--ATSPSFCDGPSTSTGFSFGN--GLSTNAG 1208
Query: 155 HGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTG 204
G G + G G G+ +G G SG G G+ G GPG TG
Sbjct: 1209 FGGGLNTSAGFGGGLGTSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTG 1258
Score = 38.9 bits (89), Expect = 0.011
Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 13/157 (8%)
Query: 43 ALAAATAAAAAAASAAAATAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPGF 102
+ A + A + + F +A L P S ++ PS P GF
Sbjct: 1138 SFGGAHGTSLCFGGAPSTSLCFGSASNTNLCFGGPPSTSACFSGATSPSFCDGPSTSTGF 1197
Query: 103 TH-NIAHGSLGFEPVYVSCIAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGS 161
+ N + GF + S+ G G+S+G G S+ +G G G+
Sbjct: 1198 SFGNGLSTNAGFGG------------GLNTSAGFGGGLGTSAGFSGGLSTSSGFDGGLGT 1245
Query: 162 GPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASG 198
G G PG+ +G G G G +G G G+ G G
Sbjct: 1246 SAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFGGG 1282
Score = 38.9 bits (89), Expect = 0.011
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 15/79 (18%)
Query: 127 TTTDHSSNPGPVPGSSSGPVLG---------------SSSGAGHGSGSGSGPGCGSVPGS 171
T+T SS P + G S GP G S+GAG G G +G G G P +
Sbjct: 1353 TSTGFSSGPSSIVGFSGGPSTGVGFCSGPSTSGFSGGPSTGAGFGGGPNTGAGFGGGPST 1412
Query: 172 GSGPGPGSGPGSGPGHGSG 190
+G G G+ G G
Sbjct: 1413 SAGFGSGAASLGACGFSYG 1431
Score = 38.5 bits (88), Expect = 0.014
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGP------GCGSVPGSGSGPGPGSGPGSGPGHGSGSHP 193
GS+ G G S G G GS P G ++ G GSG +G P +G
Sbjct: 1300 GSTLGTSAGFSGGLSTSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFTGEPSTSTGFSS 1359
Query: 194 GPASGPGPDTGPDSELSPCIPP 215
GP+S G GP + + C P
Sbjct: 1360 GPSSIVGFSGGPSTGVGFCSGP 1381
Score = 38.1 bits (87), Expect = 0.018
Identities = 29/102 (28%), Positives = 37/102 (36%), Gaps = 11/102 (10%)
Query: 127 TTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSG--------SGSGPGCGSVPGSGSGPGPG 178
T+ S P ++G SG+ +G +G G S+ G GP G
Sbjct: 1315 TSDGFGSRPNASFDRGLSTIIGFGSGSNTSTGFTGEPSTSTGFSSGPSSIVGFSGGPSTG 1374
Query: 179 SGPGSGP---GHGSGSHPGPASGPGPDTGPDSELSPCIPPGF 217
G SGP G G G G GP+TG P GF
Sbjct: 1375 VGFCSGPSTSGFSGGPSTGAGFGGGPNTGAGFGGGPSTSAGF 1416
Score = 35.8 bits (81), Expect = 0.090
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 132 SSNPGPVPGSSS--GPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGP------GS 183
S+ G PG+S+ G LG+S+G G G+ +G G G V G G G G+ G+
Sbjct: 1246 SAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGT 1305
Query: 184 GPGHGSGSHPGPASGPGPDTGPDSELSPCI 213
G G G P+ D LS I
Sbjct: 1306 SAGFSGGLSTSDGFGSRPNASFDRGLSTII 1335
>gi|133922582 zinc finger protein 358 [Homo sapiens]
Length = 568
Score = 52.0 bits (123), Expect = 1e-06
Identities = 51/177 (28%), Positives = 62/177 (35%), Gaps = 15/177 (8%)
Query: 42 SALAAATAAAAAAASAAAATAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPG 101
S+L AA+AAAA AA A AA L + M P SLLG
Sbjct: 388 SSLTKHKRVHEGAAAAAAAAAAAAAAAAAGLGLGPGLSPASMMRP-GQVSLLGPDAV--- 443
Query: 102 FTHNIAHGSLGFEPVYVSCIAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGS 161
++ LG P + D S PG +P SS P+ GS S S
Sbjct: 444 ---SVLGSGLGLSP------GTSSGRNPDPGSGPGTLPDPSSKPLPGSRSTPSPTPVESS 494
Query: 162 GPGCGSVPGSGSGPGPGSG--PGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPG 216
P G G P P P P P P S P P + +SP +P G
Sbjct: 495 DPKAGHDAGPDLVPSPDLDPVPSPDPDPVPSPDPNPVSCPDPCSPTRGTVSPALPTG 551
Score = 48.1 bits (113), Expect = 2e-05
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 123 QDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGP----- 177
Q + T + G +++ +++ AG G G G P PG S GP
Sbjct: 386 QASSLTKHKRVHEGAAAAAAAAAAAAAAAAAGLGLGPGLSPASMMRPGQVSLLGPDAVSV 445
Query: 178 -GSGPGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPGFRN 219
GSG G PG SG +P P SGPG T PD P PG R+
Sbjct: 446 LGSGLGLSPGTSSGRNPDPGSGPG--TLPDPSSKPL--PGSRS 484
Score = 46.6 bits (109), Expect = 5e-05
Identities = 59/201 (29%), Positives = 72/201 (35%), Gaps = 58/201 (28%)
Query: 49 AAAAAAASAAAATAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAGPGFTHNIAH 108
AAAAAAA+AAAA AA AG G ++
Sbjct: 400 AAAAAAAAAAAAAAA---------------------------------AAGLGLGPGLSP 426
Query: 109 GSLGFEPVYVSCIAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSV 168
S+ P VS + D + S G PG+SSG + G G G+ P +
Sbjct: 427 ASM-MRPGQVSLLGPDAVSVL--GSGLGLSPGTSSG----RNPDPGSGPGTLPDPSSKPL 479
Query: 169 PGSGSGPGPGSGPGSGP--GHGSG------------SHPGPASGPGPDTGPDSELSPCIP 214
PGS S P P S P GH +G P P P PD P S PC P
Sbjct: 480 PGSRSTPSPTPVESSDPKAGHDAGPDLVPSPDLDPVPSPDPDPVPSPDPNPVSCPDPCSP 539
Query: 215 PGFRNLVADRVPNYTS--WSQ 233
R V+ +P S W Q
Sbjct: 540 T--RGTVSPALPTGESPEWVQ 558
Score = 45.8 bits (107), Expect = 9e-05
Identities = 41/119 (34%), Positives = 47/119 (39%), Gaps = 21/119 (17%)
Query: 135 PGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSG--PGPGSGPGSGPGHGSGSH 192
PG P S P G S G + S G G G PG+ SG P PGSGPG+ P S
Sbjct: 422 PGLSPASMMRP--GQVSLLGPDAVSVLGSGLGLSPGTSSGRNPDPGSGPGTLPDPSSKPL 479
Query: 193 PGPASGP----------------GPDTGPDSELSPCIPPGFRNLVADRVPNYTSWSQHC 235
PG S P GPD P +L P +P + V PN S C
Sbjct: 480 PGSRSTPSPTPVESSDPKAGHDAGPDLVPSPDLDP-VPSPDPDPVPSPDPNPVSCPDPC 537
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 51.6 bits (122), Expect = 2e-06
Identities = 35/86 (40%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGS 191
SS+ G GSSSG G SSG G+ GS GS GS G SG G G G+G
Sbjct: 267 SSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGH 326
Query: 192 HPG------PASGPGPDTGPDSELSP 211
PG A G G +SE SP
Sbjct: 327 KPGCEKPGNEARGSGESGIQNSETSP 352
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/67 (44%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 140 GSSSGPVLGSSSGAGHGSGSG--SGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPAS 197
GSSSG GSSSG+ G SG SG G+ GS G S GS G SG+H G
Sbjct: 266 GSSSG---GSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGG 322
Query: 198 GPGPDTG 204
G G G
Sbjct: 323 GNGHKPG 329
Score = 42.4 bits (98), Expect = 0.001
Identities = 37/95 (38%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query: 132 SSNPGPVPGSSSGPV---------LGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPG 182
SSN G GS SG GSSSG G SGS SG G G SG GS
Sbjct: 241 SSNSGGGSGSQSGSSGSGSNGDNNNGSSSG-GSSSGSSSGGSSGGSSGGSSGNSGGSRGD 299
Query: 183 SGPGHGSGSHPGPASG-PGPDTGPDSELSPCIPPG 216
SG GS G +SG G G + C PG
Sbjct: 300 SGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPG 334
Score = 41.2 bits (95), Expect = 0.002
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 137 PVPGSSSGPVLGSSSGAGHGSG-SGSGPGCGSVPGSGS-GPGPGSGPGSGPGHGSGSHPG 194
P P S G S G+G SG SGSG + GS S G GS G G SG G
Sbjct: 232 PPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSG 291
Query: 195 PASGPGPDTGPDS 207
+ G D+G +S
Sbjct: 292 NSGGSRGDSGSES 304
Score = 34.7 bits (78), Expect = 0.20
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 14/83 (16%)
Query: 139 PGSSSGPVLGSSSGAGHGSGSGSG--------------PGCGSVPGSGSGPGPGSGPGSG 184
PG+S+G + GA G G G PG GSV S G + P SG
Sbjct: 177 PGNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSG 236
Query: 185 PGHGSGSHPGPASGPGPDTGPDS 207
G GS + G + +G S
Sbjct: 237 SGGGSSNSGGGSGSQSGSSGSGS 259
Score = 33.1 bits (74), Expect = 0.58
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 132 SSNPGPVPGSS-SGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSG 190
S N G G S S GSS+G+ G+ GSG G G PG G G S
Sbjct: 290 SGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARGSGESGIQNSE 349
Query: 191 SHPG 194
+ PG
Sbjct: 350 TSPG 353
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 51.6 bits (122), Expect = 2e-06
Identities = 35/86 (40%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGS 191
SS+ G GSSSG G SSG G+ GS GS GS G SG G G G+G
Sbjct: 267 SSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGH 326
Query: 192 HPG------PASGPGPDTGPDSELSP 211
PG A G G +SE SP
Sbjct: 327 KPGCEKPGNEARGSGESGIQNSETSP 352
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/67 (44%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 140 GSSSGPVLGSSSGAGHGSGSG--SGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPAS 197
GSSSG GSSSG+ G SG SG G+ GS G S GS G SG+H G
Sbjct: 266 GSSSG---GSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGG 322
Query: 198 GPGPDTG 204
G G G
Sbjct: 323 GNGHKPG 329
Score = 42.4 bits (98), Expect = 0.001
Identities = 37/95 (38%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query: 132 SSNPGPVPGSSSGPV---------LGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPG 182
SSN G GS SG GSSSG G SGS SG G G SG GS
Sbjct: 241 SSNSGGGSGSQSGSSGSGSNGDNNNGSSSG-GSSSGSSSGGSSGGSSGGSSGNSGGSRGD 299
Query: 183 SGPGHGSGSHPGPASG-PGPDTGPDSELSPCIPPG 216
SG GS G +SG G G + C PG
Sbjct: 300 SGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPG 334
Score = 41.2 bits (95), Expect = 0.002
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 137 PVPGSSSGPVLGSSSGAGHGSG-SGSGPGCGSVPGSGS-GPGPGSGPGSGPGHGSGSHPG 194
P P S G S G+G SG SGSG + GS S G GS G G SG G
Sbjct: 232 PPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSG 291
Query: 195 PASGPGPDTGPDS 207
+ G D+G +S
Sbjct: 292 NSGGSRGDSGSES 304
Score = 34.7 bits (78), Expect = 0.20
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 14/83 (16%)
Query: 139 PGSSSGPVLGSSSGAGHGSGSGSG--------------PGCGSVPGSGSGPGPGSGPGSG 184
PG+S+G + GA G G G PG GSV S G + P SG
Sbjct: 177 PGNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSG 236
Query: 185 PGHGSGSHPGPASGPGPDTGPDS 207
G GS + G + +G S
Sbjct: 237 SGGGSSNSGGGSGSQSGSSGSGS 259
Score = 33.1 bits (74), Expect = 0.58
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 132 SSNPGPVPGSS-SGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSG 190
S N G G S S GSS+G+ G+ GSG G G PG G G S
Sbjct: 290 SGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARGSGESGIQNSE 349
Query: 191 SHPG 194
+ PG
Sbjct: 350 TSPG 353
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 51.2 bits (121), Expect = 2e-06
Identities = 58/214 (27%), Positives = 72/214 (33%), Gaps = 52/214 (24%)
Query: 49 AAAAAAASAAAATAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAG------PGF 102
A A+AAAA AA AK A + P P P ++G P AG PG
Sbjct: 296 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGG------PGFGPGVVGVPGAGVPGVGVPGA 349
Query: 103 THNIAHGSL---GFEPVYVS--CIAQDTCTTTDHSSNPGP-------------------- 137
+ G+ P VS A+ + + PG
Sbjct: 350 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 409
Query: 138 ----VPGSSSGPVLGSSSGAGHGSGSGSGPGC-----------GSVPGSGSGPGPGSGPG 182
+PG + P +G G G G G P G VPG G PG G PG
Sbjct: 410 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 469
Query: 183 SGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPG 216
G G G PG PG P ++P I PG
Sbjct: 470 VGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPG 503
Score = 39.3 bits (90), Expect = 0.008
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 131 HSSNPGPVPGSSSGPVLGS--SSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHG 188
H S PG VPG+ G V G GAG G+ G G G P P PG G+G G G
Sbjct: 22 HPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKP---LKPVPGGLAGAGLGAG 78
Query: 189 SGSHP 193
G+ P
Sbjct: 79 LGAFP 83
Score = 33.1 bits (74), Expect = 0.58
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 136 GPVP-GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG-PGSGPGHGSGSHP 193
G +P G G V G++ AG+ +G+G GP + + + G+G G PG G P
Sbjct: 224 GKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 283
Query: 194 G-PASGPG 200
G P + PG
Sbjct: 284 GVPGAIPG 291
Score = 31.2 bits (69), Expect = 2.2
Identities = 33/108 (30%), Positives = 37/108 (34%), Gaps = 40/108 (37%)
Query: 137 PVPGSSSGPVLGSSSGA-------------------------GHGSGSGSGPGCGS---- 167
PVPG +G LG+ GA G+G G PG G
Sbjct: 65 PVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVS 124
Query: 168 ----VPGSGSGPGPGSGPGSG-PGHGSGS------HPGPASGPGPDTG 204
VP G+G PG PG G PG G PG PG TG
Sbjct: 125 AGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTG 172
Score = 30.4 bits (67), Expect = 3.8
Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 18/91 (19%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGS----------------GPGPGSGPGS 183
G+ + VL GAG G+ PG G + G G+ G G PG
Sbjct: 267 GAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG- 325
Query: 184 GPGHGSGSHPGPASGPGPDTGPDSELSPCIP 214
GPG G G P +G P G P +P
Sbjct: 326 GPGFGPGVVGVPGAGV-PGVGVPGAGIPVVP 355
Score = 29.3 bits (64), Expect = 8.4
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 40 PRSALAAATAAAAAAASAAAATAAFTTAKAAAL 72
P + A AAAAAAA AAA A F AA L
Sbjct: 596 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL 628
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 51.2 bits (121), Expect = 2e-06
Identities = 58/214 (27%), Positives = 72/214 (33%), Gaps = 52/214 (24%)
Query: 49 AAAAAAASAAAATAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAG------PGF 102
A A+AAAA AA AK A + P P P ++G P AG PG
Sbjct: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGG------PGFGPGVVGVPGAGVPGVGVPGA 354
Query: 103 THNIAHGSL---GFEPVYVS--CIAQDTCTTTDHSSNPGP-------------------- 137
+ G+ P VS A+ + + PG
Sbjct: 355 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 414
Query: 138 ----VPGSSSGPVLGSSSGAGHGSGSGSGPGC-----------GSVPGSGSGPGPGSGPG 182
+PG + P +G G G G G P G VPG G PG G PG
Sbjct: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
Query: 183 SGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPG 216
G G G PG PG P ++P I PG
Sbjct: 475 VGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPG 508
Score = 39.3 bits (90), Expect = 0.008
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 131 HSSNPGPVPGSSSGPVLGS--SSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHG 188
H S PG VPG+ G V G GAG G+ G G G P P PG G+G G G
Sbjct: 22 HPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKP---LKPVPGGLAGAGLGAG 78
Query: 189 SGSHP 193
G+ P
Sbjct: 79 LGAFP 83
Score = 33.1 bits (74), Expect = 0.58
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 136 GPVP-GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG-PGSGPGHGSGSHP 193
G +P G G V G++ AG+ +G+G GP + + + G+G G PG G P
Sbjct: 229 GKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 288
Query: 194 G-PASGPG 200
G P + PG
Sbjct: 289 GVPGAIPG 296
Score = 30.4 bits (67), Expect = 3.8
Identities = 30/93 (32%), Positives = 35/93 (37%), Gaps = 35/93 (37%)
Query: 137 PVPGSSSGPVLGSSSGA-------------------------GHGSGSGSGPGCG----- 166
PVPG +G LG+ GA G+G G PG G
Sbjct: 65 PVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVS 124
Query: 167 ---SVPGS-GSGPGPGSGPGSGPGHG-SGSHPG 194
SVPG+ PG G PG PG G G +PG
Sbjct: 125 AAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPG 157
Score = 30.4 bits (67), Expect = 3.8
Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 18/91 (19%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGS----------------GPGPGSGPGS 183
G+ + VL GAG G+ PG G + G G+ G G PG
Sbjct: 272 GAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG- 330
Query: 184 GPGHGSGSHPGPASGPGPDTGPDSELSPCIP 214
GPG G G P +G P G P +P
Sbjct: 331 GPGFGPGVVGVPGAGV-PGVGVPGAGIPVVP 360
Score = 29.3 bits (64), Expect = 8.4
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 40 PRSALAAATAAAAAAASAAAATAAFTTAKAAAL 72
P + A AAAAAAA AAA A F AA L
Sbjct: 601 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL 633
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 51.2 bits (121), Expect = 2e-06
Identities = 58/214 (27%), Positives = 72/214 (33%), Gaps = 52/214 (24%)
Query: 49 AAAAAAASAAAATAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAG------PGF 102
A A+AAAA AA AK A + P P P ++G P AG PG
Sbjct: 286 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGG------PGFGPGVVGVPGAGVPGVGVPGA 339
Query: 103 THNIAHGSL---GFEPVYVS--CIAQDTCTTTDHSSNPGP-------------------- 137
+ G+ P VS A+ + + PG
Sbjct: 340 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 399
Query: 138 ----VPGSSSGPVLGSSSGAGHGSGSGSGPGC-----------GSVPGSGSGPGPGSGPG 182
+PG + P +G G G G G P G VPG G PG G PG
Sbjct: 400 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 459
Query: 183 SGPGHGSGSHPGPASGPGPDTGPDSELSPCIPPG 216
G G G PG PG P ++P I PG
Sbjct: 460 VGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPG 493
Score = 35.8 bits (81), Expect = 0.090
Identities = 39/131 (29%), Positives = 46/131 (35%), Gaps = 45/131 (34%)
Query: 131 HSSNPGPVPGSSSG-------------------PVLGSSSGAGHGSGSGSGPGC----GS 167
H S PG VPG+ G PV G +GAG G+G G+ P
Sbjct: 22 HPSRPGGVPGAIPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGAL 81
Query: 168 VPG-----------SGSGPGPGSGPGSG----------PGHGSGSHPGPASGPG-PDTGP 205
VPG + +G G G PG G P G+G PG G G P P
Sbjct: 82 VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYP 141
Query: 206 DSELSPCIPPG 216
L PG
Sbjct: 142 GGVLPGARFPG 152
Score = 33.1 bits (74), Expect = 0.58
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 136 GPVP-GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG-PGSGPGHGSGSHP 193
G +P G G V G++ AG+ +G+G GP + + + G+G G PG G P
Sbjct: 214 GKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 273
Query: 194 G-PASGPG 200
G P + PG
Sbjct: 274 GVPGAIPG 281
Score = 31.2 bits (69), Expect = 2.2
Identities = 33/108 (30%), Positives = 37/108 (34%), Gaps = 40/108 (37%)
Query: 137 PVPGSSSGPVLGSSSGA-------------------------GHGSGSGSGPGCGS---- 167
PVPG +G LG+ GA G+G G PG G
Sbjct: 55 PVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVS 114
Query: 168 ----VPGSGSGPGPGSGPGSG-PGHGSGS------HPGPASGPGPDTG 204
VP G+G PG PG G PG G PG PG TG
Sbjct: 115 AGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTG 162
Score = 30.4 bits (67), Expect = 3.8
Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 18/91 (19%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGS----------------GPGPGSGPGS 183
G+ + VL GAG G+ PG G + G G+ G G PG
Sbjct: 257 GAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG- 315
Query: 184 GPGHGSGSHPGPASGPGPDTGPDSELSPCIP 214
GPG G G P +G P G P +P
Sbjct: 316 GPGFGPGVVGVPGAGV-PGVGVPGAGIPVVP 345
Score = 29.3 bits (64), Expect = 8.4
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 40 PRSALAAATAAAAAAASAAAATAAFTTAKAAAL 72
P + A AAAAAAA AAA A F AA L
Sbjct: 586 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL 618
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 51.2 bits (121), Expect = 2e-06
Identities = 31/64 (48%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHG---SGSHPGPA 196
GSS G G G GHG SG G G GS G SG G G G S GHG SG + G +
Sbjct: 476 GSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGG-SSSGGHGGSSSGGYGGGS 534
Query: 197 SGPG 200
SG G
Sbjct: 535 SGGG 538
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/63 (50%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 148 GSSSGAGHGSGS-GSGPGCGSVPGSGSGPGPGSGPG--SGPGHGSGSHPGPASGPGPDTG 204
GSS G G G GS G G G GS G SG G G G G SG G+G GS G +SG G G
Sbjct: 457 GSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGG 516
Query: 205 PDS 207
S
Sbjct: 517 SSS 519
Score = 50.4 bits (119), Expect = 4e-06
Identities = 29/58 (50%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGS---GPGSGPGHGSGSHPG 194
GSS G G SS GHG S G G GS G G G G GS G SG G+G GS G
Sbjct: 507 GSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSG 564
Score = 49.7 bits (117), Expect = 6e-06
Identities = 34/75 (45%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 133 SNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSH 192
S+ G G SSG G SSG G+G GS SG GS S G G GS G G G+G GS
Sbjct: 494 SSGGGYGGGSSG---GGSSGGGYGGGSSSGGHGGS---SSGGYGGGSSGGGGGGYGGGSS 547
Query: 193 PGPASGPGPDTGPDS 207
G +S G G S
Sbjct: 548 GGGSSSGGGYGGGSS 562
Score = 48.5 bits (114), Expect = 1e-05
Identities = 30/71 (42%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHG--- 188
SS G G S G G S G SG G G G G G G G G G SG G+G
Sbjct: 458 SSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGS 517
Query: 189 -SGSHPGPASG 198
SG H G +SG
Sbjct: 518 SSGGHGGSSSG 528
Score = 46.6 bits (109), Expect = 5e-05
Identities = 29/78 (37%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 133 SNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSG------PG 186
S+ G G G G SSG G+G GS G G G GS G G SG G
Sbjct: 477 SSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSG 536
Query: 187 HGSGSHPGPASGPGPDTG 204
G G + G +SG G +G
Sbjct: 537 GGGGGYGGGSSGGGSSSG 554
Score = 45.8 bits (107), Expect = 9e-05
Identities = 32/73 (43%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSG------SGPGCGSVPGSGSGPGPGSGPGSGP 185
SS G G G GSSSG GS SG SG G G G SG G SG G G
Sbjct: 503 SSGGGSSGGGYGG---GSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGG 559
Query: 186 GHGSGSHPGPASG 198
G SG H +SG
Sbjct: 560 GSSSGGHKSSSSG 572
Score = 43.5 bits (101), Expect = 4e-04
Identities = 29/69 (42%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 133 SNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSH 192
S+ G GSSSG G SSG G G G G GS G G G G SG G S
Sbjct: 517 SSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSG---GHKSSSSGS 573
Query: 193 PGPASGPGP 201
G +S GP
Sbjct: 574 VGESSSKGP 582
Score = 42.7 bits (99), Expect = 7e-04
Identities = 27/66 (40%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 140 GSSSGPVLGSSS-GAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASG 198
GSS G G S G G+G GS G G G G G G SG G G G G G G
Sbjct: 457 GSSGGGGRGGGSFGGGYGGGSSGGGSSGG--GHGGGHGGSSGGGYGGGSSGGGSSGGGYG 514
Query: 199 PGPDTG 204
G +G
Sbjct: 515 GGSSSG 520
Score = 33.9 bits (76), Expect = 0.34
Identities = 23/61 (37%), Positives = 24/61 (39%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
GSS G G SSG G G G GS S G G G G GS G + G
Sbjct: 60 GSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGG 119
Query: 200 G 200
G
Sbjct: 120 G 120
Score = 33.9 bits (76), Expect = 0.34
Identities = 26/65 (40%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 136 GPVPGSSSGPVLGSSSGAGHGSGS--GSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHP 193
G GS G S G G GS G G GS G G G G G G G G G G
Sbjct: 83 GSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFG---GGGFGGGFGGGFGGDG 139
Query: 194 GPASG 198
G SG
Sbjct: 140 GLLSG 144
Score = 31.6 bits (70), Expect = 1.7
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 150 SSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPG 200
S G G G G G G G S+ S S G G SG G GS +SG G
Sbjct: 16 SGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSG-GFSGGSFSRGSSGGG 65
Score = 30.8 bits (68), Expect = 2.9
Identities = 24/73 (32%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGS 191
S G + G G GS + G G G GS G G G G G G G G
Sbjct: 71 SGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGG 130
Query: 192 HPGPASGPGPDTG 204
G G G D G
Sbjct: 131 FGG---GFGGDGG 140
Score = 30.8 bits (68), Expect = 2.9
Identities = 25/60 (41%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 132 SSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGS 191
SS G GS G GS G G GS G G G G G G G G G G G SG+
Sbjct: 92 SSFGGSYGGSFGG---GSFGGGSFGGGSFGGGGFG---GGGFGGGFGGGFGGDGGLLSGN 145
>gi|53829370 neuralized homolog 4 isoform 1 [Homo sapiens]
Length = 1562
Score = 51.2 bits (121), Expect = 2e-06
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 150 SSGAGHGSGSGSGPGCGSVPGSGSGP-GPGSGPGSGPGHGSGSHPGPASG 198
++G+G GSG GPG G PG G GP G GSGPGS G GSG P +G
Sbjct: 2 AAGSGGSGGSGGGPGPG--PGGGGGPSGSGSGPGSNGGLGSGGELHPRTG 49
Score = 40.4 bits (93), Expect = 0.004
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 141 SSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSG 184
+ SG GS G G G G G GP GSGSGPG G GSG
Sbjct: 3 AGSGGSGGSGGGPGPGPGGGGGPS-----GSGSGPGSNGGLGSG 41
Score = 34.7 bits (78), Expect = 0.20
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 11/46 (23%)
Query: 135 PGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG 180
PGP PG GP SGSGSGPG GSG P +G
Sbjct: 15 PGPGPGGGGGP-----------SGSGSGPGSNGGLGSGGELHPRTG 49
Score = 29.3 bits (64), Expect = 8.4
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 178 GSGPGSGPGHGSGSHPGPASGP-GPDTGPDS 207
GSG G G G G PG GP G +GP S
Sbjct: 4 GSGGSGGSGGGPGPGPGGGGGPSGSGSGPGS 34
>gi|53829368 neuralized homolog 4 isoform 2 [Homo sapiens]
Length = 1560
Score = 51.2 bits (121), Expect = 2e-06
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 150 SSGAGHGSGSGSGPGCGSVPGSGSGP-GPGSGPGSGPGHGSGSHPGPASG 198
++G+G GSG GPG G PG G GP G GSGPGS G GSG P +G
Sbjct: 2 AAGSGGSGGSGGGPGPG--PGGGGGPSGSGSGPGSNGGLGSGGELHPRTG 49
Score = 40.4 bits (93), Expect = 0.004
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 141 SSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSG 184
+ SG GS G G G G G GP GSGSGPG G GSG
Sbjct: 3 AGSGGSGGSGGGPGPGPGGGGGPS-----GSGSGPGSNGGLGSG 41
Score = 34.7 bits (78), Expect = 0.20
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 11/46 (23%)
Query: 135 PGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG 180
PGP PG GP SGSGSGPG GSG P +G
Sbjct: 15 PGPGPGGGGGP-----------SGSGSGPGSNGGLGSGGELHPRTG 49
Score = 29.3 bits (64), Expect = 8.4
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 178 GSGPGSGPGHGSGSHPGPASGP-GPDTGPDS 207
GSG G G G G PG GP G +GP S
Sbjct: 4 GSGGSGGSGGGPGPGPGGGGGPSGSGSGPGS 34
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 50.8 bits (120), Expect = 3e-06
Identities = 49/174 (28%), Positives = 68/174 (39%), Gaps = 21/174 (12%)
Query: 40 PRSALAAATAAAAAAASAAAATAAFTTA-----KAAALSTKTPAPCSEFMEPSSDPSLLG 94
P + AA AAAAA+ +AAAA++ F T+ ALS P E + P L
Sbjct: 288 PHVGVTAAAAAAAASGAAAAASSPFATSIRPLDTFRALSHPYSRP--ELLCSFRHPGLYQ 345
Query: 95 EPCAGPGFTHNIAHGSLGFEPVYVSCIAQDTCTTTDHSSNPGPVPGSSSGP---VLGSSS 151
P A G + + A ++ G P S P + SS
Sbjct: 346 APAAAAGLNSAAS----------AAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSS 395
Query: 152 GAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPG-PASGPGPDTG 204
+ + + + GS G G G G G G G G G G GS G A+ P ++G
Sbjct: 396 QSAAAAAAAAAAALGSRGGGGGGGGGGGGGGGGAGAGGGSDFGCSAAAPRSESG 449
Score = 48.9 bits (115), Expect = 1e-05
Identities = 42/143 (29%), Positives = 54/143 (37%), Gaps = 45/143 (31%)
Query: 34 PSSDDSPRSALAAATAAAAAAASAAAATAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLL 93
P +P +A +AA+AAAA+AAAA AA + A A A + APCS
Sbjct: 341 PGLYQAPAAAAGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCS------------ 388
Query: 94 GEPCAGPGFTHNIAHGSLGFEPVYVSCIAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGA 153
+SC HSS +++ LGS G
Sbjct: 389 -----------------------CLSC----------HSSQSAAAAAAAAAAALGSRGGG 415
Query: 154 GHGSGSGSGPGCGSVPGSGSGPG 176
G G G G G G G+ G GS G
Sbjct: 416 GGGGGGGGGGGGGAGAGGGSDFG 438
Score = 29.3 bits (64), Expect = 8.4
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Query: 140 GSSSGPVLGSSSGAGHGS---GSGSGPGCGSVPGSGSG 174
GS++G S+SG+G GS GSG G ++ GSGSG
Sbjct: 148 GSAAGTTT-SASGSGLGSLHGGSGGSGGSAALGGSGSG 184
>gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo
sapiens]
Length = 907
Score = 50.1 bits (118), Expect = 5e-06
Identities = 64/249 (25%), Positives = 93/249 (37%), Gaps = 40/249 (16%)
Query: 7 TEGSRSRSRSLDI---QPSSEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAATAA 63
+EGS + LD+ +P + + ++ P +A + A A AAAAA+ AATAA
Sbjct: 483 SEGSAEAAPELDLFAMKPPETSVPVVTPTASTAPPVPATAPSPAPAVAAAAAATTAATAA 542
Query: 64 FTTAKAAALSTKTPAP-----CSEFMEPSSDPSLLGEPCAGPGF----THNIAHGSLGFE 114
TT + +T T AP + E + + + +P A P T + G
Sbjct: 543 ATTTTTTSAATATTAPPALDIFGDLFESTPEVAAAPKPDAAPSIDLFSTDAFSSPPQGAS 602
Query: 115 PVYVSCIAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGA----GHGSG-SGSGPGCGSVP 169
PV S + D + ++ P P +++ P SSG G G S S P S
Sbjct: 603 PVPESSLTADLLSVDAFAA---PSPATTASPAKVDSSGVIDLFGDAFGSSASEPQPASQA 659
Query: 170 GSGSGPGPGSGPGSGPGHGSGSHPGP-----------------ASGPGPDTGPDSELSPC 212
S S G G GS P P A G P T S P
Sbjct: 660 ASSSSASADLLAGFG---GSFMAPSPSPVTPAQNNLLQPNFEAAFGTTPSTSSSSSFDPS 716
Query: 213 IPPGFRNLV 221
+ G +L+
Sbjct: 717 VFDGLGDLL 725
Score = 34.3 bits (77), Expect = 0.26
Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 9/181 (4%)
Query: 22 SSEGLGPTSEPFPSSDDSPRSALAAATAAAAAAASAAAATAAFTTAKAAALSTKTPAPCS 81
++EG G P P S SP + + + + A + F TA +AA+ T P S
Sbjct: 292 NNEGSGA---PSPLSKSSPATTVTSPNSTPAKTIDTSPPVDLFATA-SAAVPVSTSKPSS 347
Query: 82 EFMEPSSDPSLLG-----EPCAGPGFTHNIAHGSLGFEPVYVSCIAQDTCTTTDHSSNPG 136
+ ++ D S G P P A G L E + + + P
Sbjct: 348 DLLDLQPDFSSGGAAAAAAPAPPPPAGGATAWGDLLGEDSLAALSSVPSEAQISDPFAPE 407
Query: 137 PVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPA 196
P P +++ + +S+ A + + + G PG P + G + + P P
Sbjct: 408 PTPPTTTAEIATASASASTTTTVTAVTAEVDLFGDAFAASPGEAPAASEGAAAPATPTPV 467
Query: 197 S 197
+
Sbjct: 468 A 468
Score = 33.1 bits (74), Expect = 0.58
Identities = 22/73 (30%), Positives = 28/73 (38%)
Query: 139 PGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASG 198
P SS PV G+ S G+G G P +P P + P P G+ + PG
Sbjct: 820 PTSSVPPVAGAPSVGQPGAGFGMPPAGTGMPMMPQQPVMFAQPMMRPPFGAAAVPGTQLS 879
Query: 199 PGPDTGPDSELSP 211
P P S P
Sbjct: 880 PSPTPASQSPKKP 892
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 50.1 bits (118), Expect = 5e-06
Identities = 46/142 (32%), Positives = 50/142 (35%), Gaps = 32/142 (22%)
Query: 85 EPSSDPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSCIAQDTCTTTDHSSNPGPVPGSSSG 144
+P + G P GPG H G G EP P P
Sbjct: 685 DPMRGGPMRGGPGPGPGPYHRGRGGRGGNEP---------------------PPPPPPFR 723
Query: 145 PVLGSSSGAGHGSGSGSGPGCGSVPGSGSGP--GPGSGPGS--------GPGHGSGSHPG 194
G SG G +G G GPG G V G G P GPG G G+ GPG G GS
Sbjct: 724 GARGGRSGGGPPNGRG-GPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHR 782
Query: 195 PASGPGPDTGPDSELSPCIPPG 216
P GPG G P PG
Sbjct: 783 PHEGPGGSMGGGGGHRPHEGPG 804
Score = 49.3 bits (116), Expect = 8e-06
Identities = 34/88 (38%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 128 TTDHSSNPGPVPGSSSG----PVLGSSSGAGHGSGSGSGPGCGSVPGSGSGP--GPGSGP 181
++ H + GP G SG G S G G G GPG G GSG P GPG G
Sbjct: 764 SSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPHEGPGGGM 823
Query: 182 GSGPGH----GSGSHPGPASGPGPDTGP 205
G+G GH G G G + G P GP
Sbjct: 824 GAGGGHRPHEGPGGSMGGSGGHRPHEGP 851
Score = 48.1 bits (113), Expect = 2e-05
Identities = 30/72 (41%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 135 PGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSG--SH 192
PG G+SSG G G GSG G G G G G P GPG G GSG H
Sbjct: 757 PGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGHRPH 816
Query: 193 PGPASGPGPDTG 204
GP G G G
Sbjct: 817 EGPGGGMGAGGG 828
Score = 42.4 bits (98), Expect = 0.001
Identities = 31/81 (38%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 131 HSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSG------PGCGSVPGSGSGPGPGSGPGSG 184
H + GP G S G G G G G+G G PG GS+ GSG G P GPG G
Sbjct: 797 HRPHEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPG-GSMGGSG-GHRPHEGPGHG 854
Query: 185 PGHGSGSHPGPASGPGPDTGP 205
HG H P GP
Sbjct: 855 GPHGHRPHDVPGHRGHDHRGP 875
Score = 36.2 bits (82), Expect = 0.069
Identities = 26/69 (37%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Query: 135 PGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPG----SGSGPGPGSGPG-SGPGHGS 189
P PG S G G G G G G VPG GP P G GPGHG
Sbjct: 831 PHEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGG 890
Query: 190 GSHPGPASG 198
G H G G
Sbjct: 891 GGHRGHDGG 899
Score = 35.8 bits (81), Expect = 0.090
Identities = 30/92 (32%), Positives = 32/92 (34%), Gaps = 18/92 (19%)
Query: 131 HSSNPGPVPGSSS-----GPVLGSSSGAGH----GSGSGSGPGCGSVPGSGSGPG--PGS 179
H G + G S GP G +G GH G G G G P G G G G
Sbjct: 800 HEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGH 859
Query: 180 GPGSGPGHGSGSHPGPA-------SGPGPDTG 204
P PGH H GP GPG G
Sbjct: 860 RPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGG 891
Score = 34.3 bits (77), Expect = 0.26
Identities = 36/111 (32%), Positives = 38/111 (34%), Gaps = 36/111 (32%)
Query: 135 PGPV-----PGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPG------- 182
PGP+ PG GP G H GPG G +PG GPG GP
Sbjct: 622 PGPIANGFPPGGPGGP-----KGMQHFP---PGPG-GPMPGPHGGPGGPVGPRLLGPPPP 672
Query: 183 --------SGPG---HGSGSHPGPASGPGP----DTGPDSELSPCIPPGFR 218
GPG G GP GPGP G P PP FR
Sbjct: 673 PRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRGGRGGNEPPPPPPPFR 723
Score = 34.3 bits (77), Expect = 0.26
Identities = 30/89 (33%), Positives = 33/89 (37%), Gaps = 20/89 (22%)
Query: 136 GPVPGSSSGP-------VLGSSSGAGHGSGSGSGPGCGSVPGS-GSGPGPGSGP-GSGPG 186
GP+PG GP +LG G GPG G GPGPG GP G G
Sbjct: 649 GPMPGPHGGPGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGGPMRGGPGPGPGPYHRGRG 708
Query: 187 HGSGSHPGPA-----------SGPGPDTG 204
G+ P P SG GP G
Sbjct: 709 GRGGNEPPPPPPPFRGARGGRSGGGPPNG 737
Score = 33.9 bits (76), Expect = 0.34
Identities = 24/56 (42%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 160 GSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTGPDSELSPCIPP 215
G GP P G G GP PG G G PGP GPG GP L P PP
Sbjct: 621 GPGPIANGFPPGGPG-GPKGMQHFPPGPG-GPMPGPHGGPGGPVGP-RLLGPPPPP 673
Score = 30.0 bits (66), Expect = 4.9
Identities = 26/73 (35%), Positives = 26/73 (35%), Gaps = 10/73 (13%)
Query: 135 PGPVPGSSSG--PVLGSSSGAGHGSGSGSGPGCGSVPGSGSGP-------GPGSGPGSGP 185
PG G S G P G G HG PG G P GPG G G
Sbjct: 835 PGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPPHEHRGHDGPGHGGGGHR 894
Query: 186 GHGSG-SHPGPAS 197
GH G SH G S
Sbjct: 895 GHDGGHSHGGDMS 907
>gi|169205935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 50.1 bits (118), Expect = 5e-06
Identities = 33/80 (41%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 135 PGPVP----------GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSG 184
P PVP G S G GS G G+GS G G G G G GSG G G G G G
Sbjct: 28 PKPVPCNYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYG 87
Query: 185 PGHGSGSHPGPASGPGPDTG 204
G+G G G G G +G
Sbjct: 88 CGYGCGYGTGYGCGCGSGSG 107
Score = 40.0 bits (92), Expect = 0.005
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 140 GSSSGPVLGS--SSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGH 187
GSS G G+ S G G GSG G G G G G G G G G G GSG G+
Sbjct: 59 GSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGSGY 108
Score = 29.6 bits (65), Expect = 6.4
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 15/96 (15%)
Query: 77 PAPCSEFMEPSSDPSLLGEPCAGPGFTHNIAHGSLGFEPVYVSCIA--QDTCTTTDHSSN 134
P PC+ + G C G G ++ +GS G+ Y S T + + S
Sbjct: 30 PVPCNYY----------GNSC-GYGCSYGCGYGS-GYGCGYGSSYGCGYGTGYSCGYGSG 77
Query: 135 PGPVPGSSSGPVLGSSSGAGHGSGSGSGPG-CGSVP 169
G G+ G G G G+G G GSG G CG P
Sbjct: 78 SGCGYGTGYGCGYGCGYGTGYGCGCGSGSGYCGYRP 113
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 49.7 bits (117), Expect = 6e-06
Identities = 24/51 (47%), Positives = 26/51 (50%)
Query: 136 GPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPG 186
G VPG P +G + G G G G PG G PG G PG G PG GPG
Sbjct: 477 GLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPG 527
Score = 47.0 bits (110), Expect = 4e-05
Identities = 45/147 (30%), Positives = 56/147 (38%), Gaps = 17/147 (11%)
Query: 49 AAAAAAASAAAATAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAG------PGF 102
A A+AAAA AA AK A + P P P ++G P AG PG
Sbjct: 301 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGG------PGFGPGVVGVPGAGVPGVGVPGA 354
Query: 103 THNIAHGSL---GFEPVYVS--CIAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGS 157
+ G+ P VS A+ + + PG G +G+ G G
Sbjct: 355 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 414
Query: 158 GSGSGPGCGSVPGSGSGPGPGSGPGSG 184
G G PG VPG G PG G PG G
Sbjct: 415 GVGGIPGVAGVPGVGGVPGVGGVPGVG 441
Score = 44.3 bits (103), Expect = 3e-04
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 12/93 (12%)
Query: 136 GPVPGSSSGP---VLGSSSGAGHGSGSGSGPGC---------GSVPGSGSGPGPGSGPGS 183
G VPG P ++ A +G G+ + G VPG G PG G PG
Sbjct: 435 GGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGV 494
Query: 184 GPGHGSGSHPGPASGPGPDTGPDSELSPCIPPG 216
G G G PG PG P ++P I PG
Sbjct: 495 GVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPG 527
Score = 39.3 bits (90), Expect = 0.008
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 131 HSSNPGPVPGSSSGPVLGS--SSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHG 188
H S PG VPG+ G V G GAG G+ G G G P P PG G+G G G
Sbjct: 22 HPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKP---LKPVPGGLAGAGLGAG 78
Query: 189 SGSHP 193
G+ P
Sbjct: 79 LGAFP 83
Score = 33.1 bits (74), Expect = 0.58
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 136 GPVP-GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG-PGSGPGHGSGSHP 193
G +P G G V G++ AG+ +G+G GP + + + G+G G PG G P
Sbjct: 229 GKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 288
Query: 194 G-PASGPG 200
G P + PG
Sbjct: 289 GVPGAIPG 296
Score = 31.2 bits (69), Expect = 2.2
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 135 PGPVPG----SSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSG 190
PG +PG + G +++ A + G G VPG GPG GPG G+G
Sbjct: 291 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG-----GPGFGPGVVGVPGAG 345
Query: 191 SHPGPASGPGPDTGPDSELSPCIPPG 216
G G P + + PG
Sbjct: 346 VPGVGVPGAGIPVVPGAGIPGAAVPG 371
Score = 30.4 bits (67), Expect = 3.8
Identities = 30/93 (32%), Positives = 35/93 (37%), Gaps = 35/93 (37%)
Query: 137 PVPGSSSGPVLGSSSGA-------------------------GHGSGSGSGPGCG----- 166
PVPG +G LG+ GA G+G G PG G
Sbjct: 65 PVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVS 124
Query: 167 ---SVPGS-GSGPGPGSGPGSGPGHG-SGSHPG 194
SVPG+ PG G PG PG G G +PG
Sbjct: 125 AAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPG 157
Score = 30.4 bits (67), Expect = 3.8
Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 18/91 (19%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGS----------------GPGPGSGPGS 183
G+ + VL GAG G+ PG G + G G+ G G PG
Sbjct: 272 GAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG- 330
Query: 184 GPGHGSGSHPGPASGPGPDTGPDSELSPCIP 214
GPG G G P +G P G P +P
Sbjct: 331 GPGFGPGVVGVPGAGV-PGVGVPGAGIPVVP 360
Score = 29.3 bits (64), Expect = 8.4
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 40 PRSALAAATAAAAAAASAAAATAAFTTAKAAAL 72
P + A AAAAAAA AAA A F AA L
Sbjct: 620 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL 652
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 49.7 bits (117), Expect = 6e-06
Identities = 24/51 (47%), Positives = 26/51 (50%)
Query: 136 GPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPG 186
G VPG P +G + G G G G PG G PG G PG G PG GPG
Sbjct: 472 GLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPG 522
Score = 47.0 bits (110), Expect = 4e-05
Identities = 45/147 (30%), Positives = 56/147 (38%), Gaps = 17/147 (11%)
Query: 49 AAAAAAASAAAATAAFTTAKAAALSTKTPAPCSEFMEPSSDPSLLGEPCAG------PGF 102
A A+AAAA AA AK A + P P P ++G P AG PG
Sbjct: 296 AGVGTPAAAAAAAAAAKAAKYGAAAGLVPGG------PGFGPGVVGVPGAGVPGVGVPGA 349
Query: 103 THNIAHGSL---GFEPVYVS--CIAQDTCTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGS 157
+ G+ P VS A+ + + PG G +G+ G G
Sbjct: 350 GIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 409
Query: 158 GSGSGPGCGSVPGSGSGPGPGSGPGSG 184
G G PG VPG G PG G PG G
Sbjct: 410 GVGGIPGVAGVPGVGGVPGVGGVPGVG 436
Score = 44.3 bits (103), Expect = 3e-04
Identities = 30/93 (32%), Positives = 37/93 (39%), Gaps = 12/93 (12%)
Query: 136 GPVPGSSSGP---VLGSSSGAGHGSGSGSGPGC---------GSVPGSGSGPGPGSGPGS 183
G VPG P ++ A +G G+ + G VPG G PG G PG
Sbjct: 430 GGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGVGVAPGVGVAPGV 489
Query: 184 GPGHGSGSHPGPASGPGPDTGPDSELSPCIPPG 216
G G G PG PG P ++P I PG
Sbjct: 490 GVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPG 522
Score = 39.3 bits (90), Expect = 0.008
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 131 HSSNPGPVPGSSSGPVLGS--SSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHG 188
H S PG VPG+ G V G GAG G+ G G G P P PG G+G G G
Sbjct: 22 HPSRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKP---LKPVPGGLAGAGLGAG 78
Query: 189 SGSHP 193
G+ P
Sbjct: 79 LGAFP 83
Score = 33.1 bits (74), Expect = 0.58
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 136 GPVP-GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSG-PGSGPGHGSGSHP 193
G +P G G V G++ AG+ +G+G GP + + + G+G G PG G P
Sbjct: 224 GKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 283
Query: 194 G-PASGPG 200
G P + PG
Sbjct: 284 GVPGAIPG 291
Score = 31.2 bits (69), Expect = 2.2
Identities = 33/108 (30%), Positives = 37/108 (34%), Gaps = 40/108 (37%)
Query: 137 PVPGSSSGPVLGSSSGA-------------------------GHGSGSGSGPGCGS---- 167
PVPG +G LG+ GA G+G G PG G
Sbjct: 65 PVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVS 124
Query: 168 ----VPGSGSGPGPGSGPGSG-PGHGSGS------HPGPASGPGPDTG 204
VP G+G PG PG G PG G PG PG TG
Sbjct: 125 AGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPGVPTG 172
Score = 31.2 bits (69), Expect = 2.2
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 135 PGPVPG----SSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSG 190
PG +PG + G +++ A + G G VPG GPG GPG G+G
Sbjct: 286 PGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG-----GPGFGPGVVGVPGAG 340
Query: 191 SHPGPASGPGPDTGPDSELSPCIPPG 216
G G P + + PG
Sbjct: 341 VPGVGVPGAGIPVVPGAGIPGAAVPG 366
Score = 30.4 bits (67), Expect = 3.8
Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 18/91 (19%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGS----------------GPGPGSGPGS 183
G+ + VL GAG G+ PG G + G G+ G G PG
Sbjct: 267 GAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG- 325
Query: 184 GPGHGSGSHPGPASGPGPDTGPDSELSPCIP 214
GPG G G P +G P G P +P
Sbjct: 326 GPGFGPGVVGVPGAGV-PGVGVPGAGIPVVP 355
Score = 29.3 bits (64), Expect = 8.4
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 40 PRSALAAATAAAAAAASAAAATAAFTTAKAAAL 72
P + A AAAAAAA AAA A F AA L
Sbjct: 615 PGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGL 647
>gi|169206147 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 49.3 bits (116), Expect = 8e-06
Identities = 29/75 (38%), Positives = 35/75 (46%)
Query: 126 CTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGP 185
C +S G G G G G+ +G G G+G CG GSG G G G G G G
Sbjct: 3 CNYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGC 62
Query: 186 GHGSGSHPGPASGPG 200
G+G+G G SG G
Sbjct: 63 GYGTGYGCGCGSGSG 77
Score = 49.3 bits (116), Expect = 8e-06
Identities = 29/65 (44%), Positives = 32/65 (49%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
G S G GS G G+GS G G G G G GSG G G G G G G+G G G G
Sbjct: 13 GCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYGTGYGCGC 72
Query: 200 GPDTG 204
G +G
Sbjct: 73 GSGSG 77
Score = 47.0 bits (110), Expect = 4e-05
Identities = 26/60 (43%), Positives = 30/60 (50%)
Query: 148 GSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTGPDS 207
G G+G+G G GS GCG G G G GSG G G G+G G G +G G G S
Sbjct: 17 GCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGS 76
Score = 41.6 bits (96), Expect = 0.002
Identities = 30/65 (46%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
G+S G G S G G+GSG G G GS G G G G G GSG G G G+ G G
Sbjct: 7 GNSCG--YGCSYGCGYGSGY--GCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGC 62
Query: 200 GPDTG 204
G TG
Sbjct: 63 GYGTG 67
Score = 40.0 bits (92), Expect = 0.005
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 140 GSSSGPVLGS--SSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGH 187
GSS G G+ S G G GSG G G G G G G G G G G GSG G+
Sbjct: 29 GSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGSGY 78
>gi|239750526 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 49.3 bits (116), Expect = 8e-06
Identities = 29/75 (38%), Positives = 35/75 (46%)
Query: 126 CTTTDHSSNPGPVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGP 185
C +S G G G G G+ +G G G+G CG GSG G G G G G G
Sbjct: 3 CNYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGC 62
Query: 186 GHGSGSHPGPASGPG 200
G+G+G G SG G
Sbjct: 63 GYGTGYGCGCGSGSG 77
Score = 49.3 bits (116), Expect = 8e-06
Identities = 29/65 (44%), Positives = 32/65 (49%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
G S G GS G G+GS G G G G G GSG G G G G G G+G G G G
Sbjct: 13 GCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYGTGYGCGC 72
Query: 200 GPDTG 204
G +G
Sbjct: 73 GSGSG 77
Score = 47.0 bits (110), Expect = 4e-05
Identities = 26/60 (43%), Positives = 30/60 (50%)
Query: 148 GSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGPGPDTGPDS 207
G G+G+G G GS GCG G G G GSG G G G+G G G +G G G S
Sbjct: 17 GCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGS 76
Score = 41.6 bits (96), Expect = 0.002
Identities = 30/65 (46%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 140 GSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGHGSGSHPGPASGP 199
G+S G G S G G+GSG G G GS G G G G G GSG G G G+ G G
Sbjct: 7 GNSCG--YGCSYGCGYGSGY--GCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGC 62
Query: 200 GPDTG 204
G TG
Sbjct: 63 GYGTG 67
Score = 40.0 bits (92), Expect = 0.005
Identities = 25/50 (50%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 140 GSSSGPVLGS--SSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGH 187
GSS G G+ S G G GSG G G G G G G G G G G GSG G+
Sbjct: 29 GSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCGYGTGYGCGCGSGSGY 78
>gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens]
Length = 572
Score = 49.3 bits (116), Expect = 8e-06
Identities = 32/74 (43%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 136 GPVPGSSSGPVLGSSSGAGHGSGSGS----GPGCGSVPGSGSGPGPGSGPGSG-PGHGSG 190
GP P SS+G GSS+G G GS G+ GP G VPG G G G GSG S
Sbjct: 13 GPRPDSSAG---GSSAGGGGGSAGGAAPSEGPAVGGVPGGAGGGGGVVGAGSGEDNRSSA 69
Query: 191 SHPGPASGPGPDTG 204
PG A G G
Sbjct: 70 GEPGSAGAGGDVNG 83
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.132 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,240,213
Number of Sequences: 37866
Number of extensions: 1905730
Number of successful extensions: 37668
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 864
Number of HSP's that attempted gapping in prelim test: 13912
Number of HSP's gapped (non-prelim): 11881
length of query: 485
length of database: 18,247,518
effective HSP length: 106
effective length of query: 379
effective length of database: 14,233,722
effective search space: 5394580638
effective search space used: 5394580638
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.