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Search of human proteins with 88014625
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|88014625 spindle and KT associated 1 [Homo sapiens]
(255 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21450832 spindle and KT associated 1 [Homo sapiens] 513 e-146
gi|88014625 spindle and KT associated 1 [Homo sapiens] 513 e-146
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens] 37 0.022
gi|23503243 Ras association (RalGDS/AF-6) domain family (N-termi... 36 0.037
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 35 0.063
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 34 0.11
gi|169166591 PREDICTED: similar to hCG1640714 [Homo sapiens] 33 0.24
gi|169167309 PREDICTED: similar to hCG1640714 [Homo sapiens] 33 0.24
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... 33 0.32
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... 33 0.32
gi|31621309 leucine rich repeat containing 6 [Homo sapiens] 33 0.32
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 32 0.41
gi|16262452 cingulin [Homo sapiens] 32 0.41
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 32 0.41
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 32 0.54
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 32 0.54
gi|4504035 guanine monophosphate synthetase [Homo sapiens] 32 0.54
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 32 0.54
gi|151301215 widely-interspaced zinc finger motifs [Homo sapiens] 32 0.54
gi|118498356 kinectin 1 isoform a [Homo sapiens] 32 0.70
gi|118498368 kinectin 1 isoform c [Homo sapiens] 32 0.70
gi|33620775 kinectin 1 isoform a [Homo sapiens] 32 0.70
gi|58530842 desmoplakin isoform II [Homo sapiens] 32 0.70
gi|32698688 citron [Homo sapiens] 32 0.70
gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens] 31 0.92
gi|4507651 tropomyosin 4 isoform 2 [Homo sapiens] 31 0.92
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 31 0.92
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 31 0.92
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 31 0.92
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 31 0.92
>gi|21450832 spindle and KT associated 1 [Homo sapiens]
Length = 255
Score = 513 bits (1320), Expect = e-146
Identities = 255/255 (100%), Positives = 255/255 (100%)
Query: 1 MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60
MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI
Sbjct: 1 MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60
Query: 61 QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE 120
QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE
Sbjct: 61 QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE 120
Query: 121 PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH 180
PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH
Sbjct: 121 PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH 180
Query: 181 QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR 240
QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR
Sbjct: 181 QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR 240
Query: 241 LSEVRGGGLTRYVIT 255
LSEVRGGGLTRYVIT
Sbjct: 241 LSEVRGGGLTRYVIT 255
>gi|88014625 spindle and KT associated 1 [Homo sapiens]
Length = 255
Score = 513 bits (1320), Expect = e-146
Identities = 255/255 (100%), Positives = 255/255 (100%)
Query: 1 MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60
MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI
Sbjct: 1 MASSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60
Query: 61 QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE 120
QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE
Sbjct: 61 QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEE 120
Query: 121 PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH 180
PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH
Sbjct: 121 PEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILH 180
Query: 181 QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR 240
QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR
Sbjct: 181 QPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRR 240
Query: 241 LSEVRGGGLTRYVIT 255
LSEVRGGGLTRYVIT
Sbjct: 241 LSEVRGGGLTRYVIT 255
>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
Length = 898
Score = 36.6 bits (83), Expect = 0.022
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 5 DLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQE 64
+LE L E + ++ + C ++ L+T DE+ E++N+ + EIQ
Sbjct: 483 ELEDLKRTFKEGMDELRTLRTKVKCLEDERLRTE-----DELSKYKEIINRQKAEIQNLL 537
Query: 65 QTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGS 108
+ +L E L+ ++IE+LKE V S + Q ++GS
Sbjct: 538 DKVKTADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGS 581
Score = 30.4 bits (67), Expect = 1.6
Identities = 18/90 (20%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 42 IGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVT 101
I +I + NKL+ E+ ++T + LKE L + ++ + +++N + +
Sbjct: 385 INSHVIKVKWAQNKLKAEMDSHKETKDKLKETTTKLTQAKEEADQIRKNCQDMIKTYQES 444
Query: 102 QSCVKGSDLDPEEPIKVEEPEPVKKPPKEQ 131
+ +K ++LD + + E E + +Q
Sbjct: 445 EE-IKSNELDAKLRVTKGELEKQMQEKSDQ 473
Score = 28.1 bits (61), Expect = 7.8
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 50 NELLNKLELEIQYQEQTNNSLKELCESLEED----YKDIEHLKENVPSHLPQVTVTQSCV 105
N+ L K +I+ Q L +L E+ E + ++I+ LKE++ SH+ +V Q+ +
Sbjct: 340 NKELEKNTNKIKQLSQEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKL 399
Query: 106 KGSDLDPEEPIKVEEPEPVKK 126
K +++D + K + E K
Sbjct: 400 K-AEMDSHKETKDKLKETTTK 419
>gi|23503243 Ras association (RalGDS/AF-6) domain family
(N-terminal) member 8 [Homo sapiens]
Length = 392
Score = 35.8 bits (81), Expect = 0.037
Identities = 45/246 (18%), Positives = 106/246 (43%), Gaps = 26/246 (10%)
Query: 3 SSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQY 62
+ +L++L EK+ +I+K L + + + +EI+ + + + + ++EI+
Sbjct: 163 ADELKKLIRLQTEKLQSIEKQLESNEIEIRFWEQKYNSNLEEEIVRLEQKIKRNDVEIEE 222
Query: 63 QEQTNNSL-------KELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPE-E 114
+E N L K+L + L+E + I + + +L Q+ +S ++ L E +
Sbjct: 223 EEFWENELQIEQENEKQLKDQLQEIRQKITECENKLKDYLAQIRTMESGLEAEKLQREVQ 282
Query: 115 PIKVEEPEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVIS 174
+V E E K K + I + G S ++ + IK + +++
Sbjct: 283 EAQVNEEEVKGKIGKVKGEI---------DIQGQQSL--------RLENGIKAVERSLGQ 325
Query: 175 KYKILHQPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKAD-KKFHVLLN 233
K L ++ + +T+ L + + + T + ++ A+ E AD ++ ++L+
Sbjct: 326 ATKRLQDKEQELEQLTKELRQVNLQQFIQQTGTKVTVLPAEPIEIEASHADIERGIIILS 385
Query: 234 ILRHCR 239
+ C+
Sbjct: 386 DKQECK 391
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 35.0 bits (79), Expect = 0.063
Identities = 35/157 (22%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 60 IQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVE 119
+Q + + ++++ CE L+++ K +E N+ SH+ + V VK + EE + E
Sbjct: 1430 LQEELLSMKTVQKKCEKLQKNKKKLEQEVINLRSHIERNMVELGQVKQYKQEIEERARQE 1489
Query: 120 EPEPVKKP----PKEQRSIKEMPFITCDEFNGVPSYMKSRL-----TYNQINDVIKEINK 170
E +K+ + S + + + F + S M+ R+ ++I ++ NK
Sbjct: 1490 IAEKLKEVNLFLQAQAASQENLEQFRENNFASMKSQMELRIKDLESELSKIKTSQEDFNK 1549
Query: 171 AVISKYKILH----QPKKSMNSVTRNLYHRFIDEETK 203
+ KYK L+ + +KS++S R + TK
Sbjct: 1550 TELEKYKQLYLEELKVRKSLSSKLTKTNERLAEVNTK 1586
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 34.3 bits (77), Expect = 0.11
Identities = 32/165 (19%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 59 EIQYQEQTNNSLKELCESLEEDYKDIEHLKEN-----VPSHLPQVTVTQSCVKGSDLDPE 113
E++ ++ T+ L+ + ++LE+ KD++H + + Q+ ++ V+ + + E
Sbjct: 1772 ELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEGEVE 1831
Query: 114 EPIKVEEPEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVI 173
K E VK K +R +KE+ + T ++ R ++ D++ ++ +A +
Sbjct: 1832 SEQK-RNVEAVKGLRKHERKVKELTYQTEED----------RKNILRLQDLVDKL-QAKV 1879
Query: 174 SKYKILHQPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKE 218
YK + + ++V + + R I E ++ + R I E+ + +
Sbjct: 1880 KSYKRQAEEAEEQSNVNLSKFRR-IQHELEEAEERADIAESQVNK 1923
>gi|169166591 PREDICTED: similar to hCG1640714 [Homo sapiens]
Length = 597
Score = 33.1 bits (74), Expect = 0.24
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 122 EPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINK 170
+P++K P QRS+ FIT D G+P+ + + + ++ EI K
Sbjct: 266 DPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEIPVEVVLKMVTEIKK 314
>gi|169167309 PREDICTED: similar to hCG1640714 [Homo sapiens]
Length = 597
Score = 33.1 bits (74), Expect = 0.24
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 122 EPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINK 170
+P++K P QRS+ FIT D G+P+ + + + ++ EI K
Sbjct: 266 DPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEIPVEVVLKMVTEIKK 314
>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
sapiens]
Length = 728
Score = 32.7 bits (73), Expect = 0.32
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 51 ELLNKLELEIQYQEQTNNSLKEL-CESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSD 109
EL ++ ++ +Y++ + E+ ES EED D + E PS L Q T Q +GSD
Sbjct: 238 ELGARILIQERYEKFGESEEVEMEVESDEED--DKQEKAEEPPSQLDQDTQVQDMDEGSD 295
Query: 110 LDPEEPIKVEEPEPVKKPP 128
D EE KV P PP
Sbjct: 296 -DEEEGQKVPPPPETPMPP 313
>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
sapiens]
Length = 793
Score = 32.7 bits (73), Expect = 0.32
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 51 ELLNKLELEIQYQEQTNNSLKEL-CESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSD 109
EL ++ ++ +Y++ + E+ ES EED D + E PS L Q T Q +GSD
Sbjct: 303 ELGARILIQERYEKFGESEEVEMEVESDEED--DKQEKAEEPPSQLDQDTQVQDMDEGSD 360
Query: 110 LDPEEPIKVEEPEPVKKPP 128
D EE KV P PP
Sbjct: 361 -DEEEGQKVPPPPETPMPP 378
>gi|31621309 leucine rich repeat containing 6 [Homo sapiens]
Length = 466
Score = 32.7 bits (73), Expect = 0.32
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 4 SDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQ 63
S L++L ++N + NI+K +L C + L +N IG E+ I L
Sbjct: 63 SKLKKL-EYLNLALNNIEKIENLEGCEELAKLDLTVNFIG-ELSSIKNL----------- 109
Query: 64 EQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEEPEP 123
Q N LKEL + +H +E V + LPQ+ + G +++P E IK +
Sbjct: 110 -QHNIHLKELF-LMGNPCASFDHYREFVVATLPQL----KWLDGKEIEPSERIKALQDYS 163
Query: 124 VKKP 127
V +P
Sbjct: 164 VIEP 167
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 32.3 bits (72), Expect = 0.41
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 77 LEEDYKDIEHLKENVPSHLPQVTVT--QSCVKGSDLDPEEPIK-VEEPEPVKKPPKEQRS 133
LE +KD +H + SHL T Q + P+ ++ VE PE K +E+R
Sbjct: 612 LESSFKDRDHFQLGSLSHLLNAKATGYQELPDWPEEAPDPSVRNVEVPEWTKCSNREKRK 671
Query: 134 IKEMPFITCDEFNGVPS 150
KE PF + E P+
Sbjct: 672 EKEKPFYSDSEGESGPT 688
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 32.3 bits (72), Expect = 0.41
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 3 SSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQY 62
S +E HVN++ K LSLR LK +++ +EI ++ L K + E++
Sbjct: 1086 SIQIEDERQHVNDQ----KDQLSLR----VKALKRQVDEAEEEIERLDGLRKKAQREVEE 1137
Query: 63 QEQTNNSLKELCESLEED 80
Q + N L+ +SLE+D
Sbjct: 1138 QHEVNEQLQARIKSLEKD 1155
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 32.3 bits (72), Expect = 0.41
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 31 QEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESL--EEDYKDIEHLK 88
Q P + ++IGD + +L+N+ EIQ +E L+ + +L + D + E L
Sbjct: 1566 QAPGIIIEADEIGDVRMAKYKLMNQASPEIQKEEIIRADLRNIMVNLLSKRDCTEREILI 1625
Query: 89 ENVPSHLPQVTVTQSCVKGSDL--DPEEPIKVEEPEPVKKPPKEQRSIKEMPFITCDE 144
+T TQ + ++ + EE +K + + +K E+RS+K+ I DE
Sbjct: 1626 SEEEKGNVNLTKTQLLNRSTEFHAEKEEIVKGDVQQAIKNLFSEERSVKKGILIQEDE 1683
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 32.0 bits (71), Expect = 0.54
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 6 LEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLN--KIGDEIIVINELLNKLELEIQYQ 63
LE+ NE++ N++ +L Q+ TVL K+ E I IN+L +KL+ +Q Q
Sbjct: 1306 LEEQEKRKNEEMQNVRTSLIAE---QQTNFNTVLTREKMRKENI-INDLSDKLKSTMQQQ 1361
Query: 64 EQTNNSLKELCESLEED 80
E+ K+L ESL ED
Sbjct: 1362 ERD----KDLIESLSED 1374
>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
sapiens]
Length = 1594
Score = 32.0 bits (71), Expect = 0.54
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 6 LEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLN--KIGDEIIVINELLNKLELEIQYQ 63
LE+ NE++ N++ +L Q+ TVL K+ E I IN+L +KL+ +Q Q
Sbjct: 1306 LEEQEKRKNEEMQNVRTSLIAE---QQTNFNTVLTREKMRKENI-INDLSDKLKSTMQQQ 1361
Query: 64 EQTNNSLKELCESLEED 80
E+ K+L ESL ED
Sbjct: 1362 ERD----KDLIESLSED 1374
>gi|4504035 guanine monophosphate synthetase [Homo sapiens]
Length = 693
Score = 32.0 bits (71), Expect = 0.54
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 122 EPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINK 170
+P++K P QRS+ FIT D G+P+ + + + ++ EI K
Sbjct: 623 DPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTEIKK 671
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 32.0 bits (71), Expect = 0.54
Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 21/176 (11%)
Query: 5 DLEQLCSHVNEKIGNIK----KTLSLRNCGQEPT-----LKTVLNKIGDEIIVINELLNK 55
+L++ H+ + + N K K L L+ + T +K +L +E + K
Sbjct: 1160 NLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQLKEEEEETNRQETEK 1219
Query: 56 LELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEP 115
L+ E+ +LK + EEDY D++ + + QV S ++ D D
Sbjct: 1220 LKEELSASSARTQNLKADLQRKEEDYADLKEKLTDAKKQIKQVQKEVSVMR--DEDKLLR 1277
Query: 116 IKVEEPEPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKA 171
IK+ E E K ++ +K+ +K +L ++ + I++ +A
Sbjct: 1278 IKINELEKKKNQCSQELDMKQRTI----------QQLKEQLNNQKVEEAIQQYERA 1323
>gi|151301215 widely-interspaced zinc finger motifs [Homo sapiens]
Length = 794
Score = 32.0 bits (71), Expect = 0.54
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 74 CESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLDPEEPIKVEEPEP--VKKPP 128
CE E +++ + L + SHL Q+ VT+ V GS +D I ++ +P +KK P
Sbjct: 372 CEFCGEFFENRKGLSSHARSHLRQMGVTEWSVNGSPIDTLREILKKKSKPCLIKKEP 428
Score = 28.5 bits (62), Expect = 5.9
Identities = 13/50 (26%), Positives = 29/50 (58%)
Query: 62 YQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVKGSDLD 111
+++ +++S + CE +++ + L + +HL Q VT+ CV GS ++
Sbjct: 530 HEKTSHSSTEACCELCGLYFENRKALASHARAHLRQFGVTEWCVNGSPIE 579
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 31.6 bits (70), Expect = 0.70
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 35 LKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSH 94
LK V+++ +I + ELL L++ +E+T LK+ ++L+E+ +++ K S
Sbjct: 799 LKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSI 858
Query: 95 LPQVTVTQSCVKGSD 109
+V Q+ +KG +
Sbjct: 859 TSKVQELQNLLKGKE 873
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 31.6 bits (70), Expect = 0.70
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 35 LKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSH 94
LK V+++ +I + ELL L++ +E+T LK+ ++L+E+ +++ K S
Sbjct: 799 LKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSI 858
Query: 95 LPQVTVTQSCVKGSD 109
+V Q+ +KG +
Sbjct: 859 TSKVQELQNLLKGKE 873
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 31.6 bits (70), Expect = 0.70
Identities = 20/75 (26%), Positives = 41/75 (54%)
Query: 35 LKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENVPSH 94
LK V+++ +I + ELL L++ +E+T LK+ ++L+E+ +++ K S
Sbjct: 799 LKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLSI 858
Query: 95 LPQVTVTQSCVKGSD 109
+V Q+ +KG +
Sbjct: 859 TSKVQELQNLLKGKE 873
>gi|58530842 desmoplakin isoform II [Homo sapiens]
Length = 2272
Score = 31.6 bits (70), Expect = 0.70
Identities = 33/185 (17%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 10 CSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNS 69
CS K+ ++++ + + K L+K +I +NE + +L EI+ +++ S
Sbjct: 1069 CSQFKAKLASLEELKRQAELDGK-SAKQNLDKCYGQIKELNEKITRLTYEIEDEKRRRKS 1127
Query: 70 LKELCESLEEDYKDIEHLKENVPSHLP-QVTVTQSCVKGSDLDPEEPIKVEEPEPVKKPP 128
+++ + + DY ++ ++ +L Q ++ +K + + E + + E +K
Sbjct: 1128 VEDRFDQQKNDYDQLQKARQCEKENLGWQKLESEKAIKEKEYEIERLRVLLQEEGTRKRE 1187
Query: 129 KEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINKAVISKYKILHQPKKSMNS 188
E K + + + + NQ V++E ++++ K K+L Q K +
Sbjct: 1188 YENELAK--------------ASNRIQESKNQCTQVVQE-RESLLVKIKVLEQDKARLQR 1232
Query: 189 VTRNL 193
+ L
Sbjct: 1233 LEDEL 1237
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 31.6 bits (70), Expect = 0.70
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 41 KIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKENV 91
++ E+ + + + E+++ Q+QT +LK C LEE D+E L + +
Sbjct: 986 QLRSEVDHLRREITEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDEL 1036
>gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens]
Length = 284
Score = 31.2 bits (69), Expect = 0.92
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 7 EQLCSHVNEKIGNIKKTL-SLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQ 65
E C + E++ N+ L SL ++ + K +K +EI ++++ L + E ++ E+
Sbjct: 187 ELKCGDLEEELKNVTNNLKSLEAASEKYSEKE--DKYEEEIKLLSDKLKEAETRAEFAER 244
Query: 66 TNNSLKELCESLEEDYKDIEHLKENVPSH--LPQVTVTQSCV 105
T L++ + LEE K + +ENV H L Q +C+
Sbjct: 245 TVAKLEKTIDDLEE--KLAQAKEENVGLHQTLDQTLNELNCI 284
>gi|4507651 tropomyosin 4 isoform 2 [Homo sapiens]
Length = 248
Score = 31.2 bits (69), Expect = 0.92
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 7 EQLCSHVNEKIGNIKKTL-SLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQ 65
E C + E++ N+ L SL ++ + K +K +EI ++++ L + E ++ E+
Sbjct: 151 ELKCGDLEEELKNVTNNLKSLEAASEKYSEKE--DKYEEEIKLLSDKLKEAETRAEFAER 208
Query: 66 TNNSLKELCESLEEDYKDIEHLKENVPSH--LPQVTVTQSCV 105
T L++ + LEE K + +ENV H L Q +C+
Sbjct: 209 TVAKLEKTIDDLEE--KLAQAKEENVGLHQTLDQTLNELNCI 248
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 31.2 bits (69), Expect = 0.92
Identities = 21/106 (19%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 4 SDLEQLCSHVNEK---IGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60
++ ++L + V E + +K + + L+T+ + +G + N+ KL+
Sbjct: 1979 NEAKKLANDVKENEDHLNGLKTRIENADARNGDLLRTLNDTLGKLSAIPNDTAAKLQAVK 2038
Query: 61 QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVK 106
Q N++ K++ + E +++++ LK+N V T + VK
Sbjct: 2039 DKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVK 2084
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 31.2 bits (69), Expect = 0.92
Identities = 21/106 (19%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 4 SDLEQLCSHVNEK---IGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEI 60
++ ++L + V E + +K + + L+T+ + +G + N+ KL+
Sbjct: 1979 NEAKKLANDVKENEDHLNGLKTRIENADARNGDLLRTLNDTLGKLSAIPNDTAAKLQAVK 2038
Query: 61 QYQEQTNNSLKELCESLEEDYKDIEHLKENVPSHLPQVTVTQSCVK 106
Q N++ K++ + E +++++ LK+N V T + VK
Sbjct: 2039 DKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVK 2084
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 31.2 bits (69), Expect = 0.92
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 31 QEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKEN 90
++ T + + K+ DEI+V+++ NKL E + E+ + L EE K++ LK
Sbjct: 972 EKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNK 1031
Query: 91 VPSHLPQVTV 100
S + ++ V
Sbjct: 1032 HESMISELEV 1041
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 31.2 bits (69), Expect = 0.92
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 31 QEPTLKTVLNKIGDEIIVINELLNKLELEIQYQEQTNNSLKELCESLEEDYKDIEHLKEN 90
++ T + + K+ DEI+V+++ NKL E + E+ + L EE K++ LK
Sbjct: 979 EKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNK 1038
Query: 91 VPSHLPQVTV 100
S + ++ V
Sbjct: 1039 HESMISELEV 1048
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,640,638
Number of Sequences: 37866
Number of extensions: 448937
Number of successful extensions: 2264
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 2113
Number of HSP's gapped (non-prelim): 241
length of query: 255
length of database: 18,247,518
effective HSP length: 100
effective length of query: 155
effective length of database: 14,460,918
effective search space: 2241442290
effective search space used: 2241442290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.