Guide to the Human Genome
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Name: LOC728564 Sequence: fasta or formatted (597aa) NCBI GI: 169166591
Description:

PREDICTED: similar to hCG1640714

Not currently referenced in the text

Other entries for this name:
alt mRNA {597aa} PREDICTED: similar to hCG1640714
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         50           2
 C cysteine            2.3         14           2
 D aspartate           5.0         30           1
 E glutamate           5.0         30           2
 F phenylalanine       3.4         20           2
 G glycine             8.0         48           2
 H histidine           2.7         16           1
 I isoleucine          3.7         22           2
 K lysine              3.9         23           2
 L leucine            10.2         61           3
 M methionine          1.7         10           1
 N asparagine          1.2          7           1
 P proline             8.4         50           2
 Q glutamine           5.7         34           2
 R arginine            5.4         32           2
 S serine              8.5         51           3
 T threonine           5.9         35           2
 V valine              6.9         41           2
 W tryptophan          2.7         16           1
 Y tyrosine            1.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1640714 
LOC728564             1.000   PREDICTED: similar to hCG1640714 
GMPS                  0.173   guanine monophosphate synthetase 
LOC100291562          0.007   PREDICTED: similar to hCG2045708 
LOC100287770          0.007   PREDICTED: similar to hCG2045708 
LOC100287770          0.007   PREDICTED: hypothetical protein XP_002343109 
C18orf24              0.007   spindle and KT associated 1 
C18orf24              0.007   spindle and KT associated 1 
MYBL2                 0.007   MYB-related protein B 
LOC729081             0.005   PREDICTED: similar to hCG2040253 
LOC729081             0.005   PREDICTED: similar to hCG2040253 
SMARCD2               0.004   SWI/SNF-related matrix-associated actin-dependent r...
AMMECR1               0.004   AMMECR1 protein isoform 2 
AMMECR1               0.004   AMMECR1 protein isoform 1 
GGA3                  0.004   ADP-ribosylation factor binding protein 3 isoform sh...
GGA3                  0.004   ADP-ribosylation factor binding protein 3 isoform lo...
FLG                   0.004   filaggrin 
CCDC88C               0.004   DVL-binding protein DAPLE 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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