Guide to the Human Genome
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Name: C18orf24 Sequence: fasta or formatted (255aa) NCBI GI: 88014625
Description:

spindle and KT associated 1

Referenced in:

Spindle, M phase, and Meiosis

Other entries for this name:
alt mRNA [255aa] spindle and KT associated 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.6          4           1
 C cysteine            2.4          6           1
 D aspartate           4.7         12           1
 E glutamate          11.0         28           2
 F phenylalanine       2.4          6           1
 G glycine             3.5          9           3
 H histidine           2.7          7           1
 I isoleucine          8.2         21           2
 K lysine             11.0         28           2
 L leucine             9.8         25           2
 M methionine          1.6          4           1
 N asparagine          6.3         16           2
 P proline             4.7         12           2
 Q glutamine           3.9         10           1
 R arginine            4.3         11           2
 S serine              6.3         16           2
 T threonine           5.9         15           2
 V valine              6.7         17           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spindle and KT associated 1 
C18orf24              1.000   spindle and KT associated 1 
C10orf118             0.025   CTCL tumor antigen L14-2 
RASSF8                0.023   Ras association (RalGDS/AF-6) domain family (N-termi...
ANKRD26               0.020   ankyrin repeat domain 26 
MYH1                  0.018   myosin, heavy chain 1, skeletal muscle, adult [Homo...
LOC728564             0.016   PREDICTED: similar to hCG1640714 
LOC728564             0.016   PREDICTED: similar to hCG1640714 
SF3A1                 0.016   splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom...
SF3A1                 0.016   splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo...
LRRC6                 0.016   leucine rich repeat containing 6 
AP3B2                 0.014   adaptor-related protein complex 3, beta 2 subunit [H...
CGN                   0.014   cingulin 
XIRP2                 0.014   xin actin-binding repeat containing 2 isoform 1 [Ho...
RB1CC1                0.014   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.014   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
GMPS                  0.014   guanine monophosphate synthetase 
KIF20B                0.014   M-phase phosphoprotein 1 
WIZ                   0.014   widely-interspaced zinc finger motifs 
KTN1                  0.014   kinectin 1 isoform a 
KTN1                  0.014   kinectin 1 isoform c 
KTN1                  0.014   kinectin 1 isoform a 
DSP                   0.014   desmoplakin isoform II 
CIT                   0.014   citron 
TPM4                  0.012   tropomyosin 4 isoform 1 
TPM4                  0.012   tropomyosin 4 isoform 2 
LAMA2                 0.012   laminin alpha 2 subunit isoform b precursor 
LAMA2                 0.012   laminin alpha 2 subunit isoform a precursor 
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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