SHOX2 36617

Name: SHOX2	Sequence: fasta or formatted (190aa)		NCBI GI: 87044888
Description: short stature homeobox 2 isoform b		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [331aa] short stature homeobox 2 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 17.4 33 6 C cysteine 1.1 2 1 D aspartate 3.2 6 1 E glutamate 5.8 11 2 F phenylalanine 4.2 8 1 G glycine 3.7 7 1 H histidine 5.3 10 3 I isoleucine 1.6 3 1 K lysine 5.3 10 2 L leucine 11.1 21 1 M methionine 2.6 5 2 N asparagine 3.2 6 1 P proline 4.7 9 2 Q glutamine 7.4 14 2 R arginine 6.8 13 2 S serine 5.8 11 2 T threonine 3.7 7 2 V valine 5.3 10 2 W tryptophan 0.5 1 1 Y tyrosine 1.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 short stature homeobox 2 isoform b SHOX2 0.974 short stature homeobox 2 isoform a SHOX 0.830 short stature homeobox isoform SHOXa SHOX 0.489 short stature homeobox isoform SHOXb ARX 0.236 aristaless related homeobox DRGX 0.213 dorsal root ganglia homeobox RAX 0.199 retina and anterior neural fold homeobox PRRX2 0.199 paired related homeobox 2 PAX3 0.196 paired box 3 isoform PAX3i PAX3 0.196 paired box 3 isoform PAX3g PAX3 0.196 paired box 3 isoform PAX3h PAX3 0.196 paired box 3 isoform PAX3e PAX3 0.196 paired box 3 isoform PAX3d PAX3 0.196 paired box 3 isoform PAX3 PHOX2A 0.196 paired-like homeobox 2a PRRX1 0.196 paired mesoderm homeobox 1 isoform pmx-1a PRRX1 0.196 paired mesoderm homeobox 1 isoform pmx-1b PITX3 0.193 paired-like homeodomain 3 OTP 0.193 PREDICTED: orthopedia homeobox RAX2 0.193 retina and anterior neural fold homeobox 2 OTP 0.193 orthopedia homeobox PAX7 0.193 paired box 7 isoform 1 PAX7 0.193 paired box 7 isoform 2 PAX7 0.193 paired box 7 isoform 3 PHOX2B 0.190 paired-like homeobox 2b ALX4 0.190 aristaless-like homeobox 4 UNCX 0.190 UNC homeobox ALX1 0.188 cartilage paired-class homeoprotein 1 OTX2 0.182 orthodenticle homeobox 2 isoform b OTX2 0.182 orthodenticle homeobox 2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.