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Search of human proteins with 84626580
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|84626580 hypothetical protein LOC80178 [Homo sapiens]
(433 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|84626580 hypothetical protein LOC80178 [Homo sapiens] 862 0.0
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 46 6e-05
gi|166362732 ELK1 protein [Homo sapiens] 39 0.007
gi|166362730 ELK1 protein [Homo sapiens] 39 0.007
gi|148806884 AKT1 substrate 1 (proline-rich) [Homo sapiens] 39 0.007
gi|148806906 AKT1 substrate 1 (proline-rich) [Homo sapiens] 39 0.007
gi|148806896 AKT1 substrate 1 (proline-rich) [Homo sapiens] 39 0.007
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 39 0.012
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 38 0.016
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.046
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 36 0.060
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 36 0.060
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 36 0.060
gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens] 36 0.060
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 36 0.078
gi|122937195 plasma membrane associated protein, S3-12 [Homo sap... 35 0.10
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens] 35 0.10
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens] 35 0.13
gi|239742514 PREDICTED: similar to Putative POM121-like protein ... 35 0.13
gi|24497609 nucleoporin 62kDa [Homo sapiens] 35 0.13
gi|24497607 nucleoporin 62kDa [Homo sapiens] 35 0.13
gi|24497605 nucleoporin 62kDa [Homo sapiens] 35 0.13
gi|24497603 nucleoporin 62kDa [Homo sapiens] 35 0.13
gi|162329608 phosphodiesterase 4A isoform 1 [Homo sapiens] 35 0.13
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 35 0.13
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 35 0.13
gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo ... 34 0.23
gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo ... 34 0.23
gi|38683860 insulin receptor substrate 2 [Homo sapiens] 34 0.23
gi|40254834 kinesin family member 1C [Homo sapiens] 34 0.23
>gi|84626580 hypothetical protein LOC80178 [Homo sapiens]
Length = 433
Score = 862 bits (2227), Expect = 0.0
Identities = 433/433 (100%), Positives = 433/433 (100%)
Query: 1 MLPAGCSRRLVAELQGALDACAQRQLQLEQSLRVCRRLLHAWEPTGTRALKPPPGPETNG 60
MLPAGCSRRLVAELQGALDACAQRQLQLEQSLRVCRRLLHAWEPTGTRALKPPPGPETNG
Sbjct: 1 MLPAGCSRRLVAELQGALDACAQRQLQLEQSLRVCRRLLHAWEPTGTRALKPPPGPETNG 60
Query: 61 EDPLPACTPSPQDLKELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRSIVTSSGTTAS 120
EDPLPACTPSPQDLKELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRSIVTSSGTTAS
Sbjct: 61 EDPLPACTPSPQDLKELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRSIVTSSGTTAS 120
Query: 121 APPHSPGQAGGHASDTRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGLR 180
APPHSPGQAGGHASDTRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGLR
Sbjct: 121 APPHSPGQAGGHASDTRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGLR 180
Query: 181 DQQMAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWAQLSSTQTSDSTDAAAAK 240
DQQMAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWAQLSSTQTSDSTDAAAAK
Sbjct: 181 DQQMAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWAQLSSTQTSDSTDAAAAK 240
Query: 241 TQFLQNMQTASGGPQPRLSAVEVEAEAGRLRKACSLLRLRMREELSAAPMDWMQEYRCLL 300
TQFLQNMQTASGGPQPRLSAVEVEAEAGRLRKACSLLRLRMREELSAAPMDWMQEYRCLL
Sbjct: 241 TQFLQNMQTASGGPQPRLSAVEVEAEAGRLRKACSLLRLRMREELSAAPMDWMQEYRCLL 300
Query: 301 TLEGLQAMVGQCLHRLQELRAAVAEQPPRPCPVGRPPGASPSCGGRAEPAWSPQLLVYSS 360
TLEGLQAMVGQCLHRLQELRAAVAEQPPRPCPVGRPPGASPSCGGRAEPAWSPQLLVYSS
Sbjct: 301 TLEGLQAMVGQCLHRLQELRAAVAEQPPRPCPVGRPPGASPSCGGRAEPAWSPQLLVYSS 360
Query: 361 TQELQTLAALKLRVAVLDQQIHLEKVLMAELLPLVSAAQPQGPPWLALCRAVHSLLCEGG 420
TQELQTLAALKLRVAVLDQQIHLEKVLMAELLPLVSAAQPQGPPWLALCRAVHSLLCEGG
Sbjct: 361 TQELQTLAALKLRVAVLDQQIHLEKVLMAELLPLVSAAQPQGPPWLALCRAVHSLLCEGG 420
Query: 421 ARVLTILRDEPAV 433
ARVLTILRDEPAV
Sbjct: 421 ARVLTILRDEPAV 433
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 46.2 bits (108), Expect = 6e-05
Identities = 67/317 (21%), Positives = 111/317 (35%), Gaps = 23/317 (7%)
Query: 44 PTGTRALKPPPGPETNGEDPLPACTPSPQDLKELEFLTQALEKAVRVRRGITKAGERDKA 103
PTGT + P G + + T SP T A +T+ R
Sbjct: 358 PTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRASPTGTPSTA-----SLTRKPPRASP 412
Query: 104 PSLKSRSIVTSSGTTASAPPHSPGQAGGHASDTRPTKGLRQTTVPAKGHPERRLLSVGDG 163
+ SR+ +T +TAS P +P +A + R + T P++ P +
Sbjct: 413 TGMLSRTSITKMDSTAS-PTRTPPRASPTGTPPRASP----TGTPSRASPTGTQSTASPT 467
Query: 164 TRVGMGARTPRPGAGLRDQQMAPSAAPQAPEAFTLKEKGHLLRLP--AAFRKAASQNSSL 221
+ T P +P+ +P + L ++ A+ + S+ S
Sbjct: 468 GSPSTASPTGSPSTA------SPTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPT 521
Query: 222 WAQLSSTQTSDSTDAAA----AKTQFLQNMQTASGGPQPRLSAVEVEAEAGRLRKACSLL 277
W +++ T + A A ++ + AS P +++ + A R ++L
Sbjct: 522 WTPSTASPTGSPSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRASLTRTPSTVL 581
Query: 278 RLRMREELSAAPMDWMQEYRCLLTLEGLQAMVGQCLHRLQELRAAVAEQPPRPCPVGRPP 337
RM S M + + L M RA+ E PPR P G PP
Sbjct: 582 LTRMPPSASPTGMPSRTSPTGMPSSALLTKMDSTASITRTPPRASPTETPPRASPTGTPP 641
Query: 338 GASPS-CGGRAEPAWSP 353
ASP+ RA P +P
Sbjct: 642 RASPTGTPPRASPTGTP 658
Score = 35.0 bits (79), Expect = 0.13
Identities = 72/311 (23%), Positives = 116/311 (37%), Gaps = 52/311 (16%)
Query: 68 TPSPQDLKELE---FLTQALEKAVRVRR----GITKAGERDKAPSLKSRSIVTSSGTTAS 120
TPS LK + T+ L +A +RR +T++ R + SR+ ++ + +TA+
Sbjct: 88 TPSMASLKRMPPRASRTRTLPRASLMRRPSTASLTRSPSRASLTTTPSRASLSMTPSTAA 147
Query: 121 A-------------PPHSPGQAGGHASDTRPTKGLRQTTVPAK----GHPERRLLSVGDG 163
A P S AS TR T +P++ G P L+ D
Sbjct: 148 ALTMPSRASLTRTPPRASLTMTPSTASLTRTPPRASPTGMPSRTSPTGMPSTASLTKMDS 207
Query: 164 TRVGMGARTPRPGAGLRDQQMAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWA 223
T + R + +P+ +P + L+R P +S
Sbjct: 208 T-ASITRTLSRASPTGTPPRASPTGSPPRASLSMMPSTALLIRTPP--------RASPTG 258
Query: 224 QLSSTQTSDSTDAAAAKTQFLQNMQTASGGPQPRLSAVEVEAEAGRLRKACSLLRLRMRE 283
LS T + D+ A+ T+ TAS P +++ + SL+R+ R
Sbjct: 259 MLSRTSLT-KMDSTASITRTPSRPSTASPTGTPSRASLSMTPSTA------SLMRMLPR- 310
Query: 284 ELSAAPMDWMQEYRCLLTLEGLQAMVGQCLHRLQELRAAVAEQPPRPCPVGRPPGASPS- 342
A+P + R LT A + + RA++ P R P G+P ASP+
Sbjct: 311 ---ASPTGMLS--RTSLTKMDSTASISRT-----PPRASITRTPSRASPTGKPSTASPTG 360
Query: 343 CGGRAEPAWSP 353
RA P SP
Sbjct: 361 TPSRASPTGSP 371
>gi|166362732 ELK1 protein [Homo sapiens]
Length = 428
Score = 39.3 bits (90), Expect = 0.007
Identities = 52/185 (28%), Positives = 67/185 (36%), Gaps = 38/185 (20%)
Query: 44 PTGTRALKPPPGPETNGEDPLPAC---------------TPSPQDLKELEF-----LTQA 83
P G A PP G + PL AC P +LK E L +A
Sbjct: 186 PAGAAA--PPSGSRSTSPSPLEACLEAEEAGLPLQVILTPPEAPNLKSEELNVEPGLGRA 243
Query: 84 LEKAVRV---RRGITKAGERDKAPSLKSR--SIVTSSGTTASAPP---HSPGQAGGHASD 135
L V+V + + AGER P + G A P + GQAGGHA+
Sbjct: 244 LPPEVKVEGPKEELEVAGERGFVPETTKAEPEVPPQEGVPARLPAVVMDTAGQAGGHAAS 303
Query: 136 TRPTKGLRQTTVPAKGHPERRL-LSVGDGTRVGMG-ARTPRPGAGLRDQQMAPSAAPQAP 193
+ + + P KG R L L + G G RTP G+G Q P+ P
Sbjct: 304 S------PEISQPQKGRKPRDLELPLSPSLLGGPGPERTPGSGSGSGLQAPGPALTPSLL 357
Query: 194 EAFTL 198
TL
Sbjct: 358 PTHTL 362
>gi|166362730 ELK1 protein [Homo sapiens]
Length = 428
Score = 39.3 bits (90), Expect = 0.007
Identities = 52/185 (28%), Positives = 67/185 (36%), Gaps = 38/185 (20%)
Query: 44 PTGTRALKPPPGPETNGEDPLPAC---------------TPSPQDLKELEF-----LTQA 83
P G A PP G + PL AC P +LK E L +A
Sbjct: 186 PAGAAA--PPSGSRSTSPSPLEACLEAEEAGLPLQVILTPPEAPNLKSEELNVEPGLGRA 243
Query: 84 LEKAVRV---RRGITKAGERDKAPSLKSR--SIVTSSGTTASAPP---HSPGQAGGHASD 135
L V+V + + AGER P + G A P + GQAGGHA+
Sbjct: 244 LPPEVKVEGPKEELEVAGERGFVPETTKAEPEVPPQEGVPARLPAVVMDTAGQAGGHAAS 303
Query: 136 TRPTKGLRQTTVPAKGHPERRL-LSVGDGTRVGMG-ARTPRPGAGLRDQQMAPSAAPQAP 193
+ + + P KG R L L + G G RTP G+G Q P+ P
Sbjct: 304 S------PEISQPQKGRKPRDLELPLSPSLLGGPGPERTPGSGSGSGLQAPGPALTPSLL 357
Query: 194 EAFTL 198
TL
Sbjct: 358 PTHTL 362
>gi|148806884 AKT1 substrate 1 (proline-rich) [Homo sapiens]
Length = 256
Score = 39.3 bits (90), Expect = 0.007
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 250 ASGGPQPRLSAVEVEAEAGRLRKACSLLRLRMREELSAAPMDWMQEYRCLLTLEGLQAMV 309
ASG P+ AV AE R R L+ L +AAP + C G A+
Sbjct: 2 ASGRPEELWEAVVGAAERFRARTGTELVLL------TAAPPPPPRPGPCAYAAHGRGALA 55
Query: 310 G---QCLHRLQEL-RAAVAEQPPRPCPVGRPPGASPS 342
+CLH + RAA A +PP P P +PP +PS
Sbjct: 56 EAARRCLHDIALAHRAATAARPPAPPPAPQPPSPTPS 92
>gi|148806906 AKT1 substrate 1 (proline-rich) [Homo sapiens]
Length = 256
Score = 39.3 bits (90), Expect = 0.007
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 250 ASGGPQPRLSAVEVEAEAGRLRKACSLLRLRMREELSAAPMDWMQEYRCLLTLEGLQAMV 309
ASG P+ AV AE R R L+ L +AAP + C G A+
Sbjct: 2 ASGRPEELWEAVVGAAERFRARTGTELVLL------TAAPPPPPRPGPCAYAAHGRGALA 55
Query: 310 G---QCLHRLQEL-RAAVAEQPPRPCPVGRPPGASPS 342
+CLH + RAA A +PP P P +PP +PS
Sbjct: 56 EAARRCLHDIALAHRAATAARPPAPPPAPQPPSPTPS 92
>gi|148806896 AKT1 substrate 1 (proline-rich) [Homo sapiens]
Length = 256
Score = 39.3 bits (90), Expect = 0.007
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 250 ASGGPQPRLSAVEVEAEAGRLRKACSLLRLRMREELSAAPMDWMQEYRCLLTLEGLQAMV 309
ASG P+ AV AE R R L+ L +AAP + C G A+
Sbjct: 2 ASGRPEELWEAVVGAAERFRARTGTELVLL------TAAPPPPPRPGPCAYAAHGRGALA 55
Query: 310 G---QCLHRLQEL-RAAVAEQPPRPCPVGRPPGASPS 342
+CLH + RAA A +PP P P +PP +PS
Sbjct: 56 EAARRCLHDIALAHRAATAARPPAPPPAPQPPSPTPS 92
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 38.5 bits (88), Expect = 0.012
Identities = 41/139 (29%), Positives = 50/139 (35%), Gaps = 13/139 (9%)
Query: 64 LPACTPSPQDLKELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRSIVTSSGTTASAP- 122
LP + FL +L++ R R TK G + + SRS + S T AP
Sbjct: 12 LPPTRKTSHSTPRRMFLASSLKEENRAARRKTKQGASARLSASGSRSPKSGSSETQEAPS 71
Query: 123 ---PHSPGQAGGHASDTRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGL 179
P P A T GL Q + VG G G G R P P AG
Sbjct: 72 APRPSFPPDAKAKGLLTFHDGGLLQVV------GQEVNAGVGVGRGQGTGTRPPAPAAGA 125
Query: 180 RDQQMA---PSAAPQAPEA 195
D A P A+ AP A
Sbjct: 126 ADAHSADETPEASGPAPGA 144
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 38.1 bits (87), Expect = 0.016
Identities = 41/139 (29%), Positives = 49/139 (35%), Gaps = 13/139 (9%)
Query: 64 LPACTPSPQDLKELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRSIVTSSGTTASAP- 122
LP + FL +L + R R TK G + + SRS + S T AP
Sbjct: 12 LPPTRKTSHSTPRRMFLASSLREENRAARRKTKQGASARLSASGSRSPKSGSSETQEAPS 71
Query: 123 ---PHSPGQAGGHASDTRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGL 179
P P A T GL Q + VG G G G R P P AG
Sbjct: 72 APRPSFPPDAKAKGLLTFHDGGLLQVV------GQEVNAGVGVGRGQGTGTRPPAPAAGA 125
Query: 180 RDQQMA---PSAAPQAPEA 195
D A P A+ AP A
Sbjct: 126 ADAHSADETPEASGPAPGA 144
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 36.6 bits (83), Expect = 0.046
Identities = 40/155 (25%), Positives = 54/155 (34%), Gaps = 10/155 (6%)
Query: 46 GTRALKPPPGPETNGEDPLPACTPSPQDLKELEFL--TQALEKAVRVRRGITKAGERDKA 103
GT P P P P S E + A + G+ + R +
Sbjct: 184 GTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLS 243
Query: 104 PSLKSRSIVTSSGTTASAPPHSPGQAGGHASDTRPTKGLRQTTVPAKGHPERRLLSVGDG 163
S S SG +A P +P H S +P KGL Q P + P R+ + G
Sbjct: 244 SSATPLSSPARSGPSARGTPRAPA----HPSQPKP-KGL-QALRPPQVTPPRKDAAPALG 297
Query: 164 TRVGMGARTPRPGAGLRDQQMAPSAAPQAPEAFTL 198
TP P A L+ Q AP P P + +L
Sbjct: 298 PLSSSPLATPSPSAALQSQ--APPTLPATPHSSSL 330
Score = 29.3 bits (64), Expect = 7.3
Identities = 30/101 (29%), Positives = 36/101 (35%), Gaps = 21/101 (20%)
Query: 93 GITKAGERDKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHASDTRPTKGLRQTTVPAKGH 152
G T+ G + S + G AP S AG + PT G T PA
Sbjct: 122 GTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPG---TPSPAMAR 178
Query: 153 PERRLLSVGDGTRVGMGARTPRPGAGLRDQQMAPSAAPQAP 193
R GT VG+ PRP APSA P+ P
Sbjct: 179 RSR-----AAGTEVGL----PRP---------APSARPRPP 201
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 36.2 bits (82), Expect = 0.060
Identities = 46/199 (23%), Positives = 72/199 (36%), Gaps = 50/199 (25%)
Query: 42 WEPTGTRALKPP----PGPETNG------------EDPL----------PACTPSPQDLK 75
W P KPP P PE G E P+ PA P Q +
Sbjct: 446 WPPVNEGPPKPPTELEPEPEIEGLLTPVLEAGDVDEGPVARPLSPTRLQPALPPEAQSVP 505
Query: 76 ELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHASD 135
ELE + + L + + R + + G ++AP++ + PP Q S
Sbjct: 506 ELEEVARVLAE---IPRPLKRRGSMEQAPAV-------------ALPPTHKKQYQQIISR 549
Query: 136 TRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGLRDQQMAPSAAPQAPEA 195
G P G PE L + +G+ G P P A + + S+ P+ P++
Sbjct: 550 LFHRHG-----GPGPGGPEPELSPITEGSEARAGPPAPAPPAPIPPPAPSQSSPPEQPQS 604
Query: 196 FTLKEKGHLLRLPAAFRKA 214
++ +LR + RKA
Sbjct: 605 MEMRS---VLRKAGSPRKA 620
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 36.2 bits (82), Expect = 0.060
Identities = 46/199 (23%), Positives = 72/199 (36%), Gaps = 50/199 (25%)
Query: 42 WEPTGTRALKPP----PGPETNG------------EDPL----------PACTPSPQDLK 75
W P KPP P PE G E P+ PA P Q +
Sbjct: 446 WPPVNEGPPKPPTELEPEPEIEGLLTPVLEAGDVDEGPVARPLSPTRLQPALPPEAQSVP 505
Query: 76 ELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHASD 135
ELE + + L + + R + + G ++AP++ + PP Q S
Sbjct: 506 ELEEVARVLAE---IPRPLKRRGSMEQAPAV-------------ALPPTHKKQYQQIISR 549
Query: 136 TRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGLRDQQMAPSAAPQAPEA 195
G P G PE L + +G+ G P P A + + S+ P+ P++
Sbjct: 550 LFHRHG-----GPGPGGPEPELSPITEGSEARAGPPAPAPPAPIPPPAPSQSSPPEQPQS 604
Query: 196 FTLKEKGHLLRLPAAFRKA 214
++ +LR + RKA
Sbjct: 605 MEMRS---VLRKAGSPRKA 620
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 36.2 bits (82), Expect = 0.060
Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 22/165 (13%)
Query: 114 SSGTTASAPPHSPGQAGGHASDTRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGAR-- 171
SSG+ ASA P +P A D+ P + +VPA +S G M AR
Sbjct: 825 SSGSAASATPDTPTLVASGAGDSAP---VAAASVPAPPASIMERISASKGLISPMMARLA 881
Query: 172 --------TPRPGAGLRDQQMAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWA 223
T PG+G QQ+ P+ + P A E G P ASQ+ SL
Sbjct: 882 AAALKPSATFDPGSG---QQVTPA---RFPPAQVKPEPGESTGAPGPHE--ASQDRSLDL 933
Query: 224 QLSSTQTSDSTDAAAAKTQFLQNMQTASGGPQPRL-SAVEVEAEA 267
+ + A A + L ++ P L S + ++AEA
Sbjct: 934 TVKEPSNESNGHAVPANSSLLSSLMNKMSQGNPGLGSLLNIKAEA 978
>gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens]
Length = 1166
Score = 36.2 bits (82), Expect = 0.060
Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 22/165 (13%)
Query: 114 SSGTTASAPPHSPGQAGGHASDTRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGAR-- 171
SSG+ ASA P +P A D+ P + +VPA +S G M AR
Sbjct: 825 SSGSAASATPDTPTLVASGAGDSAP---VAAASVPAPPASIMERISASKGLISPMMARLA 881
Query: 172 --------TPRPGAGLRDQQMAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWA 223
T PG+G QQ+ P+ + P A E G P ASQ+ SL
Sbjct: 882 AAALKPSATFDPGSG---QQVTPA---RFPPAQVKPEPGESTGAPGPHE--ASQDRSLDL 933
Query: 224 QLSSTQTSDSTDAAAAKTQFLQNMQTASGGPQPRL-SAVEVEAEA 267
+ + A A + L ++ P L S + ++AEA
Sbjct: 934 TVKEPSNESNGHAVPANSSLLSSLMNKMSQGNPGLGSLLNIKAEA 978
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 35.8 bits (81), Expect = 0.078
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 48 RALKPPPGPETNGEDPLPACTPSPQDL------KELEFLTQALEKAVRVRRGI-----TK 96
RA K P P P PA TP Q + E+ FL + + VR G +
Sbjct: 969 RAAKVPSTPPPKAAPPPPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRGGAEEEEEEE 1028
Query: 97 AGERDKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHASDTRPTKG 141
E ++ + + T++ +TA+A P + AG A D+ G
Sbjct: 1029 EEEEEEEEEEEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDG 1073
>gi|122937195 plasma membrane associated protein, S3-12 [Homo sapiens]
Length = 1357
Score = 35.4 bits (80), Expect = 0.10
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 181 DQQMAPSAAPQAPEAFTLKEKGHLLRLP---AAFRKAASQNSSLWAQLSSTQTSDSTDAA 237
++Q +A+ P+ + ++ + +RL +FR+ A +++ Q Q D+
Sbjct: 1155 EEQAQLAASQPGPKVLSAEQGSYFVRLGDLGPSFRQRAFEHAVSHLQHGQFQARDTLAQL 1214
Query: 238 AAKTQFLQNMQTASGGPQPRL----------SAVEVEAEAGRLRKACSLLRLRMREELSA 287
+ ++ Q A G QPRL +AV+ E +AG L + C LLR +L
Sbjct: 1215 QDCFRLIEKAQQAPEG-QPRLDQGSGASAEDAAVQEERDAGVLSRVCGLLR-----QLHT 1268
Query: 288 APMDWMQEYRCLLTLEGLQAMVGQCLHRLQELRAAVA 324
A + + L LQ VG+ H L EL VA
Sbjct: 1269 AYSGLVSSLQGLPA--ELQQPVGRARHSLCELYGIVA 1303
>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
Length = 796
Score = 35.4 bits (80), Expect = 0.10
Identities = 54/220 (24%), Positives = 82/220 (37%), Gaps = 37/220 (16%)
Query: 44 PTGTRALKPPPGPETNGEDPL---PACTPSPQDLKELEFLTQALEKAVRVRRGITKAGER 100
P GT AL PP P G +P P D E AL+ +R A +
Sbjct: 521 PPGTGAL-PPAAPSGRGAAASLRKRKASPEPPDSAE-----GALKLGEEQQRQQWMANQS 574
Query: 101 DKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHASDTRPTKGLRQTTVPAKG-HPERRLLS 159
+ S + G A PP P G H++ T P + + P G P L+S
Sbjct: 575 EALKLTMSAGGFAAPGHAAGGPPPPPPPLGPHSNRTTPPE-----SAPQNGPSPMAALMS 629
Query: 160 VGD--GTRVGMGARTPRPGAGLRDQQMAP---SAAPQAPEAFTLKEKGHLLRLPAAFRKA 214
V D GT A +P+ G+ + + S++P +P + +P R+
Sbjct: 630 VADTLGT-----AHSPKDGSSVHSTTASARRNSSSPVSPAS-----------VPGQ-RRL 672
Query: 215 ASQNSSLWAQLSSTQTSDSTDAAAAKTQFLQNMQTASGGP 254
AS+N L Q++ S Q + + A+ GP
Sbjct: 673 ASRNGDLNLQVAPPPPSAHPGMDQVHPQNIPDSPMANSGP 712
>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
Length = 397
Score = 35.0 bits (79), Expect = 0.13
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 26/157 (16%)
Query: 56 PETNGEDPLPACTPSPQDLKELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRS----- 110
PE GE TPS Q+ + +AL + + G+T + P+ K++
Sbjct: 129 PEATGESSSLEPTPSSQEAQ------RALGTSPELPTGVTGSSGTRLPPTPKAQDGGPVG 182
Query: 111 -------IVTSSGTTASAPPHSPGQ---AGGHASDTRPTKG-LRQTTVPAKGHPERRLLS 159
V+++ T S+ PH PG A S+ T+ Q + + PE S
Sbjct: 183 TELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENAPS 242
Query: 160 VGDGTRVGMGARTPRPGAGLRDQQMAPSAAPQAPEAF 196
+G RV ++PRP L ++M P P +AF
Sbjct: 243 --EGQRVWGQGQSPRPENSLEREEMGP--VPAHTDAF 275
>gi|239742514 PREDICTED: similar to Putative POM121-like protein
1-like [Homo sapiens]
Length = 896
Score = 35.0 bits (79), Expect = 0.13
Identities = 50/226 (22%), Positives = 84/226 (37%), Gaps = 35/226 (15%)
Query: 53 PPGPETNGEDPLPACTPSPQDLKELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRSIV 112
PPGP + DPLPA + +D ++ + A A G+ + AP
Sbjct: 550 PPGPLFSSSDPLPATSSHSRDSAQVTSMIPAPFTAASRDAGMRRTRPGTSAP-------- 601
Query: 113 TSSGTTASAPPHSPGQAGG---HASDTRPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMG 169
+ A+ PP + G +A D P+ L T A+ + R
Sbjct: 602 --AAAAAAPPPSTLNPTSGSLLNAVDEGPSHFLASATAAARARRSQ--------VRYNQR 651
Query: 170 ARTPRPGAGLRDQQMAPSAAPQAPEAF-TLKEKGHLLRLPAAFRKAASQNSSLWAQLSST 228
++T R + L+ + A S++ + E LK + R AS + L S+T
Sbjct: 652 SQTSRTRSCLK--RNASSSSHSSTEGLQELKRR----------RGPASSHCQLALSSSNT 699
Query: 229 QTSDSTDAAAAKTQFLQNMQTASGGP-QPRLSAVEVEAEAGRLRKA 273
+ D A +++ + TA G PR + +A R+ A
Sbjct: 700 VSEDGPQAVSSRDTRCEKADTAPGQTLAPRGGSPRSQASRPRINSA 745
>gi|24497609 nucleoporin 62kDa [Homo sapiens]
Length = 522
Score = 35.0 bits (79), Expect = 0.13
Identities = 49/205 (23%), Positives = 69/205 (33%), Gaps = 26/205 (12%)
Query: 80 LTQALEKAVRVRRGITKAG------ERDKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHA 133
LT A+ V +G G AP+ S + G+TA + G AG A
Sbjct: 121 LTNAISSTVTSSQGTAPTGFVFGPSTTSVAPATTSGGFSFTGGSTAQPSGFNIGSAGNSA 180
Query: 134 SDT----------RPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGLRDQQ 183
T P T PA P + S G + A P A
Sbjct: 181 QPTAPATLPFTPATPAATTAGATQPAAPTPTATITSTGPSLFASI-ATAPTSSATTGLSL 239
Query: 184 MAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWAQLSSTQTSDSTDAAAAKTQF 243
P AP A T +G L+ P A ++ S+ ++T +S ST T F
Sbjct: 240 CTPVTTAGAPTAGT---QGFSLKAPGAASGTSTTTSTAATATATTTSSSST------TGF 290
Query: 244 LQNMQTASGGPQPRLSAVEVEAEAG 268
N++ + P +A V A G
Sbjct: 291 ALNLKPLAPAGIPSNTAAAVTAPPG 315
>gi|24497607 nucleoporin 62kDa [Homo sapiens]
Length = 522
Score = 35.0 bits (79), Expect = 0.13
Identities = 49/205 (23%), Positives = 69/205 (33%), Gaps = 26/205 (12%)
Query: 80 LTQALEKAVRVRRGITKAG------ERDKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHA 133
LT A+ V +G G AP+ S + G+TA + G AG A
Sbjct: 121 LTNAISSTVTSSQGTAPTGFVFGPSTTSVAPATTSGGFSFTGGSTAQPSGFNIGSAGNSA 180
Query: 134 SDT----------RPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGLRDQQ 183
T P T PA P + S G + A P A
Sbjct: 181 QPTAPATLPFTPATPAATTAGATQPAAPTPTATITSTGPSLFASI-ATAPTSSATTGLSL 239
Query: 184 MAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWAQLSSTQTSDSTDAAAAKTQF 243
P AP A T +G L+ P A ++ S+ ++T +S ST T F
Sbjct: 240 CTPVTTAGAPTAGT---QGFSLKAPGAASGTSTTTSTAATATATTTSSSST------TGF 290
Query: 244 LQNMQTASGGPQPRLSAVEVEAEAG 268
N++ + P +A V A G
Sbjct: 291 ALNLKPLAPAGIPSNTAAAVTAPPG 315
>gi|24497605 nucleoporin 62kDa [Homo sapiens]
Length = 522
Score = 35.0 bits (79), Expect = 0.13
Identities = 49/205 (23%), Positives = 69/205 (33%), Gaps = 26/205 (12%)
Query: 80 LTQALEKAVRVRRGITKAG------ERDKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHA 133
LT A+ V +G G AP+ S + G+TA + G AG A
Sbjct: 121 LTNAISSTVTSSQGTAPTGFVFGPSTTSVAPATTSGGFSFTGGSTAQPSGFNIGSAGNSA 180
Query: 134 SDT----------RPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGLRDQQ 183
T P T PA P + S G + A P A
Sbjct: 181 QPTAPATLPFTPATPAATTAGATQPAAPTPTATITSTGPSLFASI-ATAPTSSATTGLSL 239
Query: 184 MAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWAQLSSTQTSDSTDAAAAKTQF 243
P AP A T +G L+ P A ++ S+ ++T +S ST T F
Sbjct: 240 CTPVTTAGAPTAGT---QGFSLKAPGAASGTSTTTSTAATATATTTSSSST------TGF 290
Query: 244 LQNMQTASGGPQPRLSAVEVEAEAG 268
N++ + P +A V A G
Sbjct: 291 ALNLKPLAPAGIPSNTAAAVTAPPG 315
>gi|24497603 nucleoporin 62kDa [Homo sapiens]
Length = 522
Score = 35.0 bits (79), Expect = 0.13
Identities = 49/205 (23%), Positives = 69/205 (33%), Gaps = 26/205 (12%)
Query: 80 LTQALEKAVRVRRGITKAG------ERDKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHA 133
LT A+ V +G G AP+ S + G+TA + G AG A
Sbjct: 121 LTNAISSTVTSSQGTAPTGFVFGPSTTSVAPATTSGGFSFTGGSTAQPSGFNIGSAGNSA 180
Query: 134 SDT----------RPTKGLRQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGLRDQQ 183
T P T PA P + S G + A P A
Sbjct: 181 QPTAPATLPFTPATPAATTAGATQPAAPTPTATITSTGPSLFASI-ATAPTSSATTGLSL 239
Query: 184 MAPSAAPQAPEAFTLKEKGHLLRLPAAFRKAASQNSSLWAQLSSTQTSDSTDAAAAKTQF 243
P AP A T +G L+ P A ++ S+ ++T +S ST T F
Sbjct: 240 CTPVTTAGAPTAGT---QGFSLKAPGAASGTSTTTSTAATATATTTSSSST------TGF 290
Query: 244 LQNMQTASGGPQPRLSAVEVEAEAG 268
N++ + P +A V A G
Sbjct: 291 ALNLKPLAPAGIPSNTAAAVTAPPG 315
>gi|162329608 phosphodiesterase 4A isoform 1 [Homo sapiens]
Length = 886
Score = 35.0 bits (79), Expect = 0.13
Identities = 54/211 (25%), Positives = 76/211 (36%), Gaps = 49/211 (23%)
Query: 123 PHSPGQAGGHASDTRPTKGLRQTTV--PAKGHPERRLLSVGDGTRVGMGAR--------T 172
PH P + A DT GLR T + P+ H G G G +R T
Sbjct: 61 PHRPIERAD-AMDTSDRPGLRTTRMSWPSSFHGT----GTGSGGAGGGSSRRFEAENGPT 115
Query: 173 PRPGAGLRDQQMAPSAAPQAPEAFTLKEKGHLLRLPAAF---RKAASQNSSLWAQ----- 224
P PG D Q +P A A + + + L R + + K S+NSS+ ++
Sbjct: 116 PSPGRSPLDSQASPGLVLHAGAATSQRRESFLYRSDSDYDMSPKTMSRNSSVTSEAHAED 175
Query: 225 ---------LSSTQTSDSTDAAAAKTQFLQNMQTASGGPQPRLSAVEVEAEAGRLRKACS 275
L+S ++ S + N ++ GGP P A E + C
Sbjct: 176 LIVTPFAQVLASLRSVRSNFSLLTNVPVPSNKRSPLGGPTPVCKATLSE-------ETCQ 228
Query: 276 LLRLRMREELSAAPMDWMQEYRCLLTLEGLQ 306
L EEL DW CL LE +Q
Sbjct: 229 QLARETLEEL-----DW-----CLEQLETMQ 249
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 35.0 bits (79), Expect = 0.13
Identities = 73/295 (24%), Positives = 114/295 (38%), Gaps = 39/295 (13%)
Query: 8 RRLVAELQGALDACAQRQLQLEQSLRVCRRLLHAWEPTGTRALKPPPGPETNGEDPLPAC 67
RR + EL+G LD Q L + ++ R LH +P G R PG E+ ++ L
Sbjct: 41 RRRIEELEGQLDQLTQENRDLREESQLHRGELHR-DPHGAR---DSPGRESQYQN-LRET 95
Query: 68 TPSPQDLKELEFLTQA-------LEKAVRVRRGITKAGERDKAPSLKSRSIVTSSGTTAS 120
++L+E +F A E A + R + + ERD + L+ ++G TA
Sbjct: 96 QFHHRELRESQFHQAARDVGYPNREGAYQNREAVYRDKERDASYPLQD-----TTGYTA- 149
Query: 121 APPHSPGQAGGHASDTRPTKGL-RQTTVPAKGHPERRLLSVGDGTRVGMGARTPRPGAGL 179
A H P G R HP R G VG+G R PR G
Sbjct: 150 ---RERDVAQCHLHHENPALGRERGGREAGPAHPGRE-KEAGYSAAVGVGPRPPRE-RGQ 204
Query: 180 RDQQMAPSAAPQAPEAFTLKEKGHLLRLPAAF--RKAASQNS---SLWAQLSSTQTSDST 234
+ + S++P A + PA RK+ +NS S+ + S +
Sbjct: 205 LSRGASRSSSPGAGGGHSTSTS----TSPATTLQRKSDGENSRTVSVEGDAPGSDLSTAV 260
Query: 235 DAAAAKTQF----LQNMQTASGGPQPRLSAVEVEAEAGRLRKACSLLRLRMREEL 285
D+ ++ + L + GGP + A+ RL+ A LR + EE+
Sbjct: 261 DSPGSQPPYRLSQLPPSSSHMGGPPAGVGL--PWAQRARLQPASVALRKQEEEEI 313
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 35.0 bits (79), Expect = 0.13
Identities = 46/209 (22%), Positives = 78/209 (37%), Gaps = 22/209 (10%)
Query: 42 WEPTGTRALKPPPGPETNGEDPLPA----CTPSPQDLKELEFLTQALEKAVRVRRGITKA 97
+ P R P P P+ P P +PSP + + +++ V +
Sbjct: 596 YSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKR---- 651
Query: 98 GERDKAPSLKSRSIVTSSGTTASAPPHSPGQAGGHASDTRPTKGLRQTTVP-----AKGH 152
++PSL S+ SS + ++ SP H+ RP ++ P A
Sbjct: 652 ----RSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSS 707
Query: 153 PERRLLSVGDGTRVGMGARTPRPGAGLRDQQMAPSAAPQAPEAFTLKEKGHLLRLPAAFR 212
P+RR + +RTP P + + A S +PQ+ + PAA +
Sbjct: 708 PQRRQSPSPSTRPIRRVSRTPEP----KKIKKAASPSPQSVRRVSSSRSVSGSPEPAA-K 762
Query: 213 KAASQNSSLWAQLSSTQTSDSTDAAAAKT 241
K + S + +Q ST S + AK+
Sbjct: 763 KPPAPPSPVQSQSPSTNWSPAVPVKKAKS 791
>gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo
sapiens]
Length = 229
Score = 34.3 bits (77), Expect = 0.23
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Query: 27 QLEQSLRVCRRLLHAWEPTGTRALKPPPGPETNGEDPLPACTPSPQDLKELEFLTQALEK 86
Q LR+CR P G PPP P + E P P +P +
Sbjct: 28 QARSGLRLCRTT--QGRPAG--GASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAG 83
Query: 87 AVRVRRGITKAGERDKAPSLKSRSIVTSSGTTASAPP 123
+ R + AG RD+AP+ ++ T G A PP
Sbjct: 84 PAQRSRPLQLAGPRDRAPA-RALHARTRMGRAARGPP 119
>gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo
sapiens]
Length = 229
Score = 34.3 bits (77), Expect = 0.23
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Query: 27 QLEQSLRVCRRLLHAWEPTGTRALKPPPGPETNGEDPLPACTPSPQDLKELEFLTQALEK 86
Q LR+CR P G PPP P + E P P +P +
Sbjct: 28 QARSGLRLCRTT--QGRPAG--GASPPPSPRSRPEGPGPPRPATPSARRPQGLSAGVSAG 83
Query: 87 AVRVRRGITKAGERDKAPSLKSRSIVTSSGTTASAPP 123
+ R + AG RD+AP+ ++ T G A PP
Sbjct: 84 PAQRSRPLQLAGPRDRAPA-RALHARTRMGRAARGPP 119
>gi|38683860 insulin receptor substrate 2 [Homo sapiens]
Length = 1338
Score = 34.3 bits (77), Expect = 0.23
Identities = 66/253 (26%), Positives = 92/253 (36%), Gaps = 46/253 (18%)
Query: 49 ALKPPPGPETNGEDPLPACTPSPQDLKELEFLTQALEKAVRVRRGITKAGERDKAPSLKS 108
+L+ P + E PLP SP + ++F G A AP L +
Sbjct: 894 SLEGLPSLPSMHEYPLPPEPKSPGEYINIDF-------------GEPGARLSPPAPPLLA 940
Query: 109 RSIVTSSGTTASAPPHSPGQAG-GHASDTRPTKGLRQ--------TTVPAKGHPERRLLS 159
+ +SS +AS+P S G G +SD+R L P G P +
Sbjct: 941 SAASSSSLLSASSPASSLGSGTPGTSSDSRQRSPLSDYMNLDFSSPKSPKPGAPSGHPVG 1000
Query: 160 VGDGTRVGMGART-----PRPGAGLRDQQMAPSAAPQAPEAFTLKEKGHLLRLPAAFRKA 214
DG + PRP A + P P AP G L RLP A A
Sbjct: 1001 SLDGLLSPEASSPYPPLPPRPSAS-PSSSLQPPPPPPAP--------GELYRLPPASAVA 1051
Query: 215 ASQNSSLWAQLSSTQTSDSTDAAAAKTQFLQNMQTASGGPQPRLSAVEVEAEAGRLRKAC 274
+Q + LSS T D+ D A+ PQP A + EA R+
Sbjct: 1052 TAQGPGAASSLSS-DTGDNGDYTE------MAFGVAATPPQP--IAAPPKPEAARVASPT 1102
Query: 275 S-LLRLRMREELS 286
S + RL + E++S
Sbjct: 1103 SGVKRLSLMEQVS 1115
>gi|40254834 kinesin family member 1C [Homo sapiens]
Length = 1103
Score = 34.3 bits (77), Expect = 0.23
Identities = 47/217 (21%), Positives = 75/217 (34%), Gaps = 44/217 (20%)
Query: 18 LDACAQRQLQLEQSLRVCRRLLHAWEPTGTRALKPPPGPETNGE----DPLPACTPSPQD 73
L A R L++E+ + + + E G PP G E E D +P+ P
Sbjct: 858 LQALRDRMLRMERVIPLAQDHEDENEEGGEVPWAPPEGSEAAEEAAPSDRMPSARPPSPP 917
Query: 74 LKELEFLTQALEKAVRVRRGITKAGERDKAPSLKSRSIVTSSGTTAS--------APPHS 125
L E +++ +E+ RRG + ++++ L+ + + S G PPH
Sbjct: 918 LSSWERVSRLMEEDPAFRRGRLRWLKQEQ---LRLQGLQGSGGRGGGLRRPPARFVPPHD 974
Query: 126 -----------------PGQAGGHASDT---------RPTKGLRQTTVPAKGHPERRLLS 159
PG G A P R+ P + H RR
Sbjct: 975 CKLRFPFKSNPQHRESWPGMGSGEAPTPLQPPEEVTPHPATPARRPPSPRRSHHPRRNSL 1034
Query: 160 VGDGTRVGMGARTPRPGAGLRDQQMAPSAAPQAPEAF 196
G G G G+ P P Q ++ PQ P+ +
Sbjct: 1035 DGGGRSRGAGSAQPEP---QHFQPKKHNSYPQPPQPY 1068
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,177,302
Number of Sequences: 37866
Number of extensions: 1101347
Number of successful extensions: 6602
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 247
Number of HSP's that attempted gapping in prelim test: 6291
Number of HSP's gapped (non-prelim): 611
length of query: 433
length of database: 18,247,518
effective HSP length: 105
effective length of query: 328
effective length of database: 14,271,588
effective search space: 4681080864
effective search space used: 4681080864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.