Search of human proteins with 83700223

Search of human proteins with 83700223

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|83700223 geranylgeranyl diphosphate synthase 1 isoform B
[Homo sapiens]
         (246 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|83700223 geranylgeranyl diphosphate synthase 1 isoform B [Hom...   501   e-142
gi|83700220 geranylgeranyl diphosphate synthase 1 isoform A [Hom...   501   e-142
gi|4758430 geranylgeranyl diphosphate synthase 1 isoform A [Homo...   501   e-142
gi|50659086 prenyl diphosphate synthase, subunit 1 [Homo sapiens]      45   4e-05
gi|209571584 farnesyl diphosphate synthase isoform b [Homo sapiens]    43   3e-04
gi|209571582 farnesyl diphosphate synthase isoform a [Homo sapiens]    43   3e-04
gi|4503685 farnesyl diphosphate synthase isoform a [Homo sapiens]      43   3e-04
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]     30   2.5  
gi|11141903 FAST kinase domains 5 [Homo sapiens]                       29   3.3  
gi|221307575 Rho-type GTPase-activating protein FLJ32810 [Homo s...    29   4.3  
gi|27437051 colony stimulating factor 3 isoform c [Homo sapiens]       29   4.3  
gi|27437049 colony stimulating factor 3 isoform b precursor [Hom...    29   4.3  
gi|4503079 colony stimulating factor 3 isoform a precursor [Homo...    29   4.3  
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]                     28   5.6  
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]                     28   5.6  
gi|38570149 WWC family member 3 [Homo sapiens]                         28   5.6  
gi|56676397 ankyrin repeat domain 11 [Homo sapiens]                    28   7.3  
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    28   7.3  
gi|46877066 plasticity related gene 3 [Homo sapiens]                   28   7.3  
gi|46877064 plasticity related gene 3 [Homo sapiens]                   28   7.3  
gi|32528306 replication factor C large subunit [Homo sapiens]          28   9.5  
gi|29029595 glutamate receptor KA1 precursor [Homo sapiens]            28   9.5  
gi|157502195 proteasome 26S non-ATPase subunit 13 isoform 2 [Hom...    28   9.5  
gi|157502193 proteasome 26S non-ATPase subunit 13 isoform 1 [Hom...    28   9.5  
gi|85797660 limkain b1 [Homo sapiens]                                  28   9.5  

>gi|83700223 geranylgeranyl diphosphate synthase 1 isoform B [Homo
           sapiens]
          Length = 246

 Score =  501 bits (1291), Expect = e-142
 Identities = 246/246 (100%), Positives = 246/246 (100%)

Query: 1   MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL 60
           MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL
Sbjct: 1   MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL 60

Query: 61  FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK 120
           FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK
Sbjct: 61  FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK 120

Query: 121 PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL 180
           PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL
Sbjct: 121 PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL 180

Query: 181 RQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKM 240
           RQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKM
Sbjct: 181 RQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKM 240

Query: 241 FKEENE 246
           FKEENE
Sbjct: 241 FKEENE 246


>gi|83700220 geranylgeranyl diphosphate synthase 1 isoform A [Homo
           sapiens]
          Length = 300

 Score =  501 bits (1291), Expect = e-142
 Identities = 246/246 (100%), Positives = 246/246 (100%)

Query: 1   MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL 60
           MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL
Sbjct: 55  MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL 114

Query: 61  FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK 120
           FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK
Sbjct: 115 FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK 174

Query: 121 PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL 180
           PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL
Sbjct: 175 PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL 234

Query: 181 RQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKM 240
           RQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKM
Sbjct: 235 RQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKM 294

Query: 241 FKEENE 246
           FKEENE
Sbjct: 295 FKEENE 300


>gi|4758430 geranylgeranyl diphosphate synthase 1 isoform A [Homo
           sapiens]
          Length = 300

 Score =  501 bits (1291), Expect = e-142
 Identities = 246/246 (100%), Positives = 246/246 (100%)

Query: 1   MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL 60
           MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL
Sbjct: 55  MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL 114

Query: 61  FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK 120
           FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK
Sbjct: 115 FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK 174

Query: 121 PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL 180
           PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL
Sbjct: 175 PLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL 234

Query: 181 RQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKM 240
           RQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKM
Sbjct: 235 RQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKM 294

Query: 241 FKEENE 246
           FKEENE
Sbjct: 295 FKEENE 300


>gi|50659086 prenyl diphosphate synthase, subunit 1 [Homo sapiens]
          Length = 415

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 48/239 (20%), Positives = 101/239 (42%), Gaps = 8/239 (3%)

Query: 1   MLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKL 60
           M+H ASL+ DD+ D++  RRG    + I+G    + + + +       +  + +   + +
Sbjct: 171 MIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASIALARIGNTTVISI 230

Query: 61  FTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLK 120
            T+ + +L +G+ L +  ++N        Y     +KT  L   +   + +       + 
Sbjct: 231 LTQVIEDLVRGEFLQLGSKENEN-ERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVH 289

Query: 121 PLL----NTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQV 176
            +       +G+ FQ+ DD  +  S      K    DL  G  + P + A    PE   +
Sbjct: 290 EIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAM 349

Query: 177 QNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVK 235
             I+R+ +   D+ +   + L+  G  + T    ++   +A ++I     +PE  AL++
Sbjct: 350 --IMRRFSLPGDVDRARQYVLQSDG-VQQTTYLAQQYCHEAIREISKLRPSPERDALIQ 405


>gi|209571584 farnesyl diphosphate synthase isoform b [Homo sapiens]
          Length = 353

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 30/222 (13%)

Query: 7   LLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVY--FLGLEKVLTLDHP---DAVKL 60
           L+ DDI D+S  RRG    +   G+    IN AN +      L K+   + P   + ++L
Sbjct: 100 LVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIEL 159

Query: 61  FTRQLLELHQGQGLDIYWRDNYTCP----TEEEYKAMVLQKTGGL---FGLAVGLMQLFS 113
           F +   +   GQ LD+             TE+ YK++V  KT        +A  +     
Sbjct: 160 FLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGI 219

Query: 114 DYKED---LKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-S 169
           D +++    K +L  +G FFQI+DDY +L   + S       D+ + K S+  +  +  +
Sbjct: 220 DGEKEHANAKKILLEMGEFFQIQDDYLDLFG-DPSVTGKIGTDIQDNKCSWLVVQCLQRA 278

Query: 170 RPESTQV----------QNILRQRT--ENIDIKKYCVHYLED 199
            PE  Q+          + + R +   E +D+    + Y ED
Sbjct: 279 TPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEED 320


>gi|209571582 farnesyl diphosphate synthase isoform a [Homo sapiens]
          Length = 419

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 30/222 (13%)

Query: 7   LLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVY--FLGLEKVLTLDHP---DAVKL 60
           L+ DDI D+S  RRG    +   G+    IN AN +      L K+   + P   + ++L
Sbjct: 166 LVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIEL 225

Query: 61  FTRQLLELHQGQGLDIYWRDNYTCP----TEEEYKAMVLQKTGGL---FGLAVGLMQLFS 113
           F +   +   GQ LD+             TE+ YK++V  KT        +A  +     
Sbjct: 226 FLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGI 285

Query: 114 DYKED---LKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-S 169
           D +++    K +L  +G FFQI+DDY +L   + S       D+ + K S+  +  +  +
Sbjct: 286 DGEKEHANAKKILLEMGEFFQIQDDYLDLFG-DPSVTGKIGTDIQDNKCSWLVVQCLQRA 344

Query: 170 RPESTQV----------QNILRQRT--ENIDIKKYCVHYLED 199
            PE  Q+          + + R +   E +D+    + Y ED
Sbjct: 345 TPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEED 386


>gi|4503685 farnesyl diphosphate synthase isoform a [Homo sapiens]
          Length = 419

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 30/222 (13%)

Query: 7   LLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVY--FLGLEKVLTLDHP---DAVKL 60
           L+ DDI D+S  RRG    +   G+    IN AN +      L K+   + P   + ++L
Sbjct: 166 LVADDIMDSSLTRRGQICWYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIEL 225

Query: 61  FTRQLLELHQGQGLDIYWRDNYTCP----TEEEYKAMVLQKTGGL---FGLAVGLMQLFS 113
           F +   +   GQ LD+             TE+ YK++V  KT        +A  +     
Sbjct: 226 FLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGI 285

Query: 114 DYKED---LKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW-S 169
           D +++    K +L  +G FFQI+DDY +L   + S       D+ + K S+  +  +  +
Sbjct: 286 DGEKEHANAKKILLEMGEFFQIQDDYLDLFG-DPSVTGKIGTDIQDNKCSWLVVQCLQRA 344

Query: 170 RPESTQV----------QNILRQRT--ENIDIKKYCVHYLED 199
            PE  Q+          + + R +   E +D+    + Y ED
Sbjct: 345 TPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEED 386


>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
          Length = 1979

 Score = 29.6 bits (65), Expect = 2.5
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 22/153 (14%)

Query: 104 LAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLT-------- 155
           L + L++L ++Y+         + L  ++ D   NL +KE   N+S  E  T        
Sbjct: 441 LQMSLLKLNNEYEVIKSTATRDISLDSELHDLRLNLEAKEQELNQSISEKETLIAEIEEL 500

Query: 156 EGKFSFPTIHAIWSRPESTQVQN----ILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLK 211
           + +    T H I  + + ++ QN    I+ +  ++++ +K  VH LED        +  K
Sbjct: 501 DRQNQEATKHMILIKDQLSKQQNEGDSIISKLKQDLNDEKKRVHQLED-----DKMDITK 555

Query: 212 ELEAKAYKQIDARGGNPELVALVKHLSKMFKEE 244
           EL+ +  K I +     +L     HL+K   E+
Sbjct: 556 ELDVQKEKLIQSEVALNDL-----HLTKQKLED 583


>gi|11141903 FAST kinase domains 5 [Homo sapiens]
          Length = 764

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 14/74 (18%)

Query: 129 FFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENID 188
           F  I   Y NLH K+ S ++               +H I+   E+ QV   L Q+ E++ 
Sbjct: 261 FLNIFSSYLNLHWKDLSLSQ--------------LVHLIYVIGENRQVSQDLMQKLESLI 306

Query: 189 IKKYCVHYLEDVGS 202
           +K   +  LE+VG+
Sbjct: 307 LKYIDLINLEEVGT 320


>gi|221307575 Rho-type GTPase-activating protein FLJ32810 [Homo
           sapiens]
          Length = 874

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 147 NKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDIKKYC--VHYLEDVGSFE 204
           +K+F   ++E K S      + S PE  ++++ +R++T++ID K++C  +  +E  G   
Sbjct: 295 SKTFTMSVSEMKSSGKMNGLVTSSPEMFKLKSCIRRKTDSID-KRFCFDIEVVERHGII- 352

Query: 205 YTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKMFKEE 244
            T     E   K +  ++A  G   +  L   +SK  KEE
Sbjct: 353 -TLQAFSEANRKLW--LEAMDGKEPIYTLPAIISK--KEE 387


>gi|27437051 colony stimulating factor 3 isoform c [Homo sapiens]
          Length = 200

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 71  GQGLDIYWRDNYTCPTEEEYKAMVL-QKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGL 128
           G  L I W    +CP++    A  L Q   GLF L  GL+Q       +L P L+TL L
Sbjct: 77  GHSLGIPWAPLSSCPSQALQLAGCLSQLHSGLF-LYQGLLQALEGISPELGPTLDTLQL 134


>gi|27437049 colony stimulating factor 3 isoform b precursor [Homo
           sapiens]
          Length = 204

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 71  GQGLDIYWRDNYTCPTEEEYKAMVL-QKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGL 128
           G  L I W    +CP++    A  L Q   GLF L  GL+Q       +L P L+TL L
Sbjct: 81  GHSLGIPWAPLSSCPSQALQLAGCLSQLHSGLF-LYQGLLQALEGISPELGPTLDTLQL 138


>gi|4503079 colony stimulating factor 3 isoform a precursor [Homo
           sapiens]
          Length = 207

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 71  GQGLDIYWRDNYTCPTEEEYKAMVL-QKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGL 128
           G  L I W    +CP++    A  L Q   GLF L  GL+Q       +L P L+TL L
Sbjct: 84  GHSLGIPWAPLSSCPSQALQLAGCLSQLHSGLF-LYQGLLQALEGISPELGPTLDTLQL 141


>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
          Length = 1173

 Score = 28.5 bits (62), Expect = 5.6
 Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 34/149 (22%)

Query: 108 LMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 167
           L +   D KE + PL  TL  F Q +++  N   K+ + NK   + L + K     IH  
Sbjct: 762 LYREIKDAKEQVSPLETTLEKFQQEKEELIN---KKNTSNKIAQDKLNDIKEKVKNIHGY 818

Query: 168 --------------WSRPESTQVQNILRQRTE-----------------NIDIKKYCVHY 196
                         + + + T++  ++ Q +E                 +ID +K    +
Sbjct: 819 MKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRLMRQDIDTQKIQERW 878

Query: 197 LEDVGSFEYTRNTLKELEAKAYKQIDARG 225
           L+D  +       LKE+E +  + +   G
Sbjct: 879 LQDNLTLRKRNEELKEVEEERKQHLKEMG 907


>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
          Length = 1312

 Score = 28.5 bits (62), Expect = 5.6
 Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 34/149 (22%)

Query: 108  LMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAI 167
            L +   D KE + PL  TL  F Q +++  N   K+ + NK   + L + K     IH  
Sbjct: 901  LYREIKDAKEQVSPLETTLEKFQQEKEELIN---KKNTSNKIAQDKLNDIKEKVKNIHGY 957

Query: 168  --------------WSRPESTQVQNILRQRTE-----------------NIDIKKYCVHY 196
                          + + + T++  ++ Q +E                 +ID +K    +
Sbjct: 958  MKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRLMRQDIDTQKIQERW 1017

Query: 197  LEDVGSFEYTRNTLKELEAKAYKQIDARG 225
            L+D  +       LKE+E +  + +   G
Sbjct: 1018 LQDNLTLRKRNEELKEVEEERKQHLKEMG 1046


>gi|38570149 WWC family member 3 [Homo sapiens]
          Length = 1092

 Score = 28.5 bits (62), Expect = 5.6
 Identities = 28/144 (19%), Positives = 62/144 (43%), Gaps = 7/144 (4%)

Query: 110 QLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWS 169
           ++  +Y    +  LN     +QI+     L  +EY +    CED +    S  + ++  +
Sbjct: 23  RMLKEYLIVAQEALNAKKEIYQIKQQRFELAQEEYQQLHKMCEDDSRSYASSFSGYSTNT 82

Query: 170 RPESTQVQNILRQRTENID-IKKYCVHYLEDVGSFEYTRNTLKELEAK------AYKQID 222
           + +  Q++  +  R + +  +K+      +++   E    TL+E++ K      +YK  +
Sbjct: 83  KYDPHQIKAEIASRRDRLSRLKRELTQMKQELQYKEKGVETLQEIDRKMSSTHTSYKLDE 142

Query: 223 ARGGNPELVALVKHLSKMFKEENE 246
           A+    EL  + K +    KE  +
Sbjct: 143 AQAIMSELRTIKKAICTGEKERRD 166


>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
          Length = 2663

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 21/106 (19%), Positives = 46/106 (43%)

Query: 130  FQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDI 189
            ++ R D A++ S +  +NK    +  E K +         + +S +  +  R+ + + D 
Sbjct: 1217 YKDRKDRASVDSTQDKKNKQKLPEKAEKKHAAEDKAKSKHKEKSDKEHSKERKSSRSADA 1276

Query: 190  KKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVK 235
            +K  +  LE+    EY  ++  ++   +      RG  P L A ++
Sbjct: 1277 EKSLLEKLEEEALHEYREDSNDKISEVSSDSFTDRGQEPGLTAFLE 1322


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23
           [Homo sapiens]
          Length = 1636

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 20/144 (13%)

Query: 49  VLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGL 108
           ++T DH +  KLF  QL +  Q   L +Y   N      ++     L +    +     +
Sbjct: 590 LVTTDHSEMKKLFEEQLKKYDQ---LKVYLEQNLAA---QDRVLCALTEANVQY---AAV 640

Query: 109 MQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIW 168
            ++ SD  +     L TL   ++  +D      K+  E + F  DL E K     + A+ 
Sbjct: 641 RRVLSDLDQKWNSTLQTLVASYEAYEDL----MKKSQEGRDFYADL-ESK-----VAALL 690

Query: 169 SRPEST-QVQNILRQRTENIDIKK 191
            R +ST Q +   RQ+  + ++KK
Sbjct: 691 ERTQSTCQAREAARQQLLDRELKK 714


>gi|46877066 plasticity related gene 3 [Homo sapiens]
          Length = 325

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 2   LHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYV 41
           ++N ++   D+E   K RR FP  H+   I S + +  Y+
Sbjct: 176 INNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYI 215


>gi|46877064 plasticity related gene 3 [Homo sapiens]
          Length = 325

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)

Query: 2   LHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYV 41
           ++N ++   D+E   K RR FP  H+   I S + +  Y+
Sbjct: 176 INNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYI 215


>gi|32528306 replication factor C large subunit [Homo sapiens]
          Length = 1147

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 151 CEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTL 210
           C++L    +S+  ++A  +R +S+ ++ I+ +   N  IK +   Y     S   T++ L
Sbjct: 664 CQELG---YSYVELNASDTRSKSS-LKAIVAESLNNTSIKGF---YSNGAASSVSTKHAL 716

Query: 211 KELEAKAYKQIDARGGNPELVALVKH 236
              E       + RGG  EL+ L+KH
Sbjct: 717 IMDEVDGMAGNEDRGGIQELIGLIKH 742


>gi|29029595 glutamate receptor KA1 precursor [Homo sapiens]
          Length = 956

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 10/65 (15%)

Query: 61  FTRQLLELHQGQGLDIY---WRDNYTCPTEEEYKA--MVLQKTGGLF-----GLAVGLMQ 110
           F   +L+L +   L+I    W +   CP EE+++A  + ++  GG+F     GL V +  
Sbjct: 763 FDLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGLIVAIFM 822

Query: 111 LFSDY 115
              ++
Sbjct: 823 AMLEF 827


>gi|157502195 proteasome 26S non-ATPase subunit 13 isoform 2 [Homo
           sapiens]
          Length = 378

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 91  KAMVLQKTG-GLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEY 144
           +A++L KT  G   L +G +Q+  +  ED++ +LN L     +   + +L SK Y
Sbjct: 111 EAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYY 165


>gi|157502193 proteasome 26S non-ATPase subunit 13 isoform 1 [Homo
           sapiens]
          Length = 376

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 91  KAMVLQKTG-GLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEY 144
           +A++L KT  G   L +G +Q+  +  ED++ +LN L     +   + +L SK Y
Sbjct: 109 EAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYY 163


>gi|85797660 limkain b1 [Homo sapiens]
          Length = 1742

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 44   LGLEKVLTLDHPDAVKLFTRQLLELHQGQ 72
            +G +++LTL H   VK FT+ LL+L + Q
Sbjct: 1162 MGSKRLLTLTHRAQVKRFTQDLLKLLKSQ 1190


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,202,816
Number of Sequences: 37866
Number of extensions: 388140
Number of successful extensions: 864
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 849
Number of HSP's gapped (non-prelim): 26
length of query: 246
length of database: 18,247,518
effective HSP length: 100
effective length of query: 146
effective length of database: 14,460,918
effective search space: 2111294028
effective search space used: 2111294028
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.