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Search of human proteins with 83035136
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|83035136 F-box protein 31 [Homo sapiens]
(539 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|83035136 F-box protein 31 [Homo sapiens] 1130 0.0
gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens] 42 0.001
gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens] 42 0.001
gi|18641360 collectin sub-family member 12 [Homo sapiens] 40 0.004
gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens] 40 0.004
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens] 40 0.005
gi|22027609 alpha 1 type XIII collagen isoform 19 [Homo sapiens] 40 0.005
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens] 40 0.005
gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens] 40 0.005
gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens] 40 0.005
gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens] 40 0.005
gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens] 40 0.005
gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens] 40 0.005
gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens] 40 0.005
gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens] 40 0.005
gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens] 40 0.005
gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens] 40 0.005
gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens] 40 0.005
gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens] 40 0.005
gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens] 40 0.005
gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens] 40 0.005
gi|22027571 alpha 1 type XIII collagen isoform 3 [Homo sapiens] 40 0.005
gi|22027568 alpha 1 type XIII collagen isoform 2 [Homo sapiens] 40 0.005
gi|22027565 alpha 1 type XIII collagen isoform 1 [Homo sapiens] 40 0.005
gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens] 40 0.005
gi|15812198 F-box only protein 2 [Homo sapiens] 40 0.007
gi|22035569 GC-rich sequence DNA-binding factor candidate isofor... 39 0.009
gi|22035565 GC-rich sequence DNA-binding factor candidate isofor... 39 0.009
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 39 0.016
gi|239754772 PREDICTED: hypothetical protein [Homo sapiens] 38 0.021
>gi|83035136 F-box protein 31 [Homo sapiens]
Length = 539
Score = 1130 bits (2923), Expect = 0.0
Identities = 539/539 (100%), Positives = 539/539 (100%)
Query: 1 MAVCARLCGVGPSRGCRRRQQRRGPAETAAADSEPDTDPEEERIEASAGVGGGLCAGPSP 60
MAVCARLCGVGPSRGCRRRQQRRGPAETAAADSEPDTDPEEERIEASAGVGGGLCAGPSP
Sbjct: 1 MAVCARLCGVGPSRGCRRRQQRRGPAETAAADSEPDTDPEEERIEASAGVGGGLCAGPSP 60
Query: 61 PPPRCSLLELPPELLVEIFASLPGTDLPSLAQVCTKFRRILHTDTIWRRRCREEYGVCEN 120
PPPRCSLLELPPELLVEIFASLPGTDLPSLAQVCTKFRRILHTDTIWRRRCREEYGVCEN
Sbjct: 61 PPPRCSLLELPPELLVEIFASLPGTDLPSLAQVCTKFRRILHTDTIWRRRCREEYGVCEN 120
Query: 121 LRKLEITGVSCRDVYAKLLHRYRHILGLWQPDIGPYGGLLNVVVDGLFIIGWMYLPPHDP 180
LRKLEITGVSCRDVYAKLLHRYRHILGLWQPDIGPYGGLLNVVVDGLFIIGWMYLPPHDP
Sbjct: 121 LRKLEITGVSCRDVYAKLLHRYRHILGLWQPDIGPYGGLLNVVVDGLFIIGWMYLPPHDP 180
Query: 181 HVDDPMRFKPLFRIHLMERKAATVECMYGHKGPHHGHIQIVKKDEFSTKCNQTDHHRMSG 240
HVDDPMRFKPLFRIHLMERKAATVECMYGHKGPHHGHIQIVKKDEFSTKCNQTDHHRMSG
Sbjct: 181 HVDDPMRFKPLFRIHLMERKAATVECMYGHKGPHHGHIQIVKKDEFSTKCNQTDHHRMSG 240
Query: 241 GRQEEFRTWLREEWGRTLEDIFHEHMQELILMKFIYTSQYDNCLTYRRIYLPPSRPDDLI 300
GRQEEFRTWLREEWGRTLEDIFHEHMQELILMKFIYTSQYDNCLTYRRIYLPPSRPDDLI
Sbjct: 241 GRQEEFRTWLREEWGRTLEDIFHEHMQELILMKFIYTSQYDNCLTYRRIYLPPSRPDDLI 300
Query: 301 KPGLFKGTYGSHGLEIVMLSFHGRRARGTKITGDPNIPAGQQTVEIDLRHRIQLPDLENQ 360
KPGLFKGTYGSHGLEIVMLSFHGRRARGTKITGDPNIPAGQQTVEIDLRHRIQLPDLENQ
Sbjct: 301 KPGLFKGTYGSHGLEIVMLSFHGRRARGTKITGDPNIPAGQQTVEIDLRHRIQLPDLENQ 360
Query: 361 RNFNELSRIVLEVRERVRQEQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTP 420
RNFNELSRIVLEVRERVRQEQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTP
Sbjct: 361 RNFNELSRIVLEVRERVRQEQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTP 420
Query: 421 GEDGGEPGDAVAAAEQPAQCGQGQPFVLPVGVSSRNEDYPRTCRMCFYGTGLIAGHGFTS 480
GEDGGEPGDAVAAAEQPAQCGQGQPFVLPVGVSSRNEDYPRTCRMCFYGTGLIAGHGFTS
Sbjct: 421 GEDGGEPGDAVAAAEQPAQCGQGQPFVLPVGVSSRNEDYPRTCRMCFYGTGLIAGHGFTS 480
Query: 481 PERTPGVFILFDEDRFGFVWLELKSFSLYSRVQATFRNADAPSPQAFDEMLKNIQSLTS 539
PERTPGVFILFDEDRFGFVWLELKSFSLYSRVQATFRNADAPSPQAFDEMLKNIQSLTS
Sbjct: 481 PERTPGVFILFDEDRFGFVWLELKSFSLYSRVQATFRNADAPSPQAFDEMLKNIQSLTS 539
>gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]
Length = 580
Score = 42.0 bits (97), Expect = 0.001
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 66 SLLELPPELLVEIFASLPGTDLPSLAQVCTKFRRILHTDTIWRRRCR 112
S+ PPEL+ I + LP DL +L Q C F + + +WRR CR
Sbjct: 38 SIQLFPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICR 84
>gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens]
Length = 318
Score = 42.0 bits (97), Expect = 0.001
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 66 SLLELPPELLVEIFASLPGTDLPSLAQVCTKFRRILHTDTIWRRRCR 112
S+ PPEL+ I + LP DL +L Q C F + + +WRR CR
Sbjct: 38 SIQLFPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICR 84
>gi|18641360 collectin sub-family member 12 [Homo sapiens]
Length = 742
Score = 40.4 bits (93), Expect = 0.004
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 385 GHEAGEG-RGRQGPRESQPSPAQPRAEAPS--KGPDGTPGEDGGEPGDAVAAAEQPAQCG 441
G G+G +G QGP+ S+ SP +P + PS GP G PG++ G PG Q Q
Sbjct: 494 GERGGKGSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKE-GLPGPQGPPGFQGLQGT 552
Query: 442 QGQPFV 447
G+P V
Sbjct: 553 VGEPGV 558
Score = 31.2 bits (69), Expect = 2.5
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 9/47 (19%)
Query: 395 QGPRESQPSPAQPRAEAPSKGPDGTPGEDG-----GEPGDAVAAAEQ 436
QGP P P PR + S+GP G G G GEPG A E+
Sbjct: 442 QGP----PGPRGPRGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGER 484
Score = 31.2 bits (69), Expect = 2.5
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 11/46 (23%)
Query: 392 RGRQGP-----------RESQPSPAQPRAEAPSKGPDGTPGEDGGE 426
RG QGP + +P P P E GP G PGE GG+
Sbjct: 454 RGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGK 499
>gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens]
Length = 412
Score = 40.4 bits (93), Expect = 0.004
Identities = 29/73 (39%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 40 EEERIEASAGVGGGLCAGPSPPPPRCSLLELPPELLVEIFASLPGTDLPSLAQVCTKFRR 99
EEE EA+ AGP+ L LP ELL+ I + L L LAQVC RR
Sbjct: 8 EEEEEEAARESAARPAAGPA-------LWRLPEELLLLICSYLDMRALGRLAQVCRWLRR 60
Query: 100 ILHTDTIWRRRCR 112
D +WRR R
Sbjct: 61 FTSCDLLWRRIAR 73
>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
Length = 717
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 372 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 426
>gi|22027609 alpha 1 type XIII collagen isoform 19 [Homo sapiens]
Length = 610
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 321 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 375
>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
Length = 655
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 310 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 364
>gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]
Length = 657
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 312 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 366
>gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens]
Length = 660
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 315 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 369
>gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]
Length = 668
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 350 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 404
>gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]
Length = 664
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 319 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 373
>gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]
Length = 690
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 372 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 426
>gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]
Length = 691
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 372 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 426
>gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]
Length = 686
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 353 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 407
>gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]
Length = 676
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 331 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 385
>gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens]
Length = 688
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 343 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 397
>gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]
Length = 703
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 372 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 426
>gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]
Length = 702
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 372 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 426
>gi|22027577 alpha 1 type XIII collagen isoform 5 [Homo sapiens]
Length = 695
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 350 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 404
>gi|22027574 alpha 1 type XIII collagen isoform 4 [Homo sapiens]
Length = 698
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 353 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 407
>gi|22027571 alpha 1 type XIII collagen isoform 3 [Homo sapiens]
Length = 700
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 355 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 409
>gi|22027568 alpha 1 type XIII collagen isoform 2 [Homo sapiens]
Length = 705
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 360 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 414
>gi|22027565 alpha 1 type XIII collagen isoform 1 [Homo sapiens]
Length = 717
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 372 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 426
>gi|22027587 alpha 1 type XIII collagen isoform 8 [Homo sapiens]
Length = 705
Score = 40.0 bits (92), Expect = 0.005
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 380 EQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGEDGGEPGDAVAAAEQ 436
E+ + G+ G GRG GP P P P+ EA G G PG+ G+ G+ AA EQ
Sbjct: 372 EKGDAGNSIGGGRGEPGP-PGLPGPPGPKGEAGVDGQVGPPGQP-GDKGERGAAGEQ 426
>gi|15812198 F-box only protein 2 [Homo sapiens]
Length = 296
Score = 39.7 bits (91), Expect = 0.007
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 25 PAETAAADSEPDTDPEEERIEASAGVGGGLCAGPSPPPPRCSLLELPPELLVEIFASLPG 84
P E +A + P+ EEE A+A L ELP LL+ + A+LP
Sbjct: 22 PEEASAEEERPEDQQEEEAAAAAA-----------------YLDELPEPLLLRVLAALPA 64
Query: 85 TDLPSLAQ-VCTKFRRILHTDTIWRRRCREE 114
+L + VC +++ ++ +W +C++E
Sbjct: 65 AELVQACRLVCLRWKELVDGAPLWLLKCQQE 95
>gi|22035569 GC-rich sequence DNA-binding factor candidate isoform 2
[Homo sapiens]
Length = 815
Score = 39.3 bits (90), Expect = 0.009
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 361 RNFNELSRIVLEVRERVRQEQQEG---------GHEAGEGRGRQGPRESQ---PSPAQPR 408
R N R E ER R E+QE G EAG G G + P P P+ P
Sbjct: 6 RRVNVRKRNDSEEEERERDEEQEPPPLLPPPGTGEEAGPGGGDRAPGGESLLGPGPSPPS 65
Query: 409 AEAPSKGPDGTPGEDGG-EPGDAVAAAEQPAQ 439
A P G + G GG EPG+ + ++P +
Sbjct: 66 ALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRE 97
>gi|22035565 GC-rich sequence DNA-binding factor candidate isoform 1
[Homo sapiens]
Length = 917
Score = 39.3 bits (90), Expect = 0.009
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 361 RNFNELSRIVLEVRERVRQEQQEG---------GHEAGEGRGRQGPRESQ---PSPAQPR 408
R N R E ER R E+QE G EAG G G + P P P+ P
Sbjct: 6 RRVNVRKRNDSEEEERERDEEQEPPPLLPPPGTGEEAGPGGGDRAPGGESLLGPGPSPPS 65
Query: 409 AEAPSKGPDGTPGEDGG-EPGDAVAAAEQPAQ 439
A P G + G GG EPG+ + ++P +
Sbjct: 66 ALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRE 97
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens]
Length = 326
Score = 38.5 bits (88), Expect = 0.016
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 66 SLLELPPELLVEIFASLPGTDLPSLAQVCTKFRRILHTDTIWR 108
+L+ELP +L+EIF+ LP D +++VC +++R++ +WR
Sbjct: 3 TLVELPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWR 45
>gi|239754772 PREDICTED: hypothetical protein [Homo sapiens]
Length = 95
Score = 38.1 bits (87), Expect = 0.021
Identities = 23/68 (33%), Positives = 29/68 (42%)
Query: 363 FNELSRIVLEVRERVRQEQQEGGHEAGEGRGRQGPRESQPSPAQPRAEAPSKGPDGTPGE 422
+ L R RER +++Q G E R QGPR P P KG G+PG
Sbjct: 2 YRVLPRSQASRRERRPRQRQHRGRERRTRRDAQGPRGGGPGFRAGGRRTPDKGRPGSPGV 61
Query: 423 DGGEPGDA 430
GG +A
Sbjct: 62 PGGGGAEA 69
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.140 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,367,010
Number of Sequences: 37866
Number of extensions: 1488990
Number of successful extensions: 10746
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 321
Number of HSP's that attempted gapping in prelim test: 8864
Number of HSP's gapped (non-prelim): 2041
length of query: 539
length of database: 18,247,518
effective HSP length: 107
effective length of query: 432
effective length of database: 14,195,856
effective search space: 6132609792
effective search space used: 6132609792
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.