BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|82734219 beta-defensin 114 [Homo sapiens] (69 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|82734219 beta-defensin 114 [Homo sapiens] 153 2e-38 gi|149944551 defensin, beta 131 [Homo sapiens] 38 0.002 gi|169173154 PREDICTED: hypothetical protein [Homo sapiens] 35 0.013 gi|169172390 PREDICTED: similar to defensin, beta 131 [Homo sapi... 35 0.013 gi|169172906 PREDICTED: similar to defensin, beta 131 [Homo sapi... 35 0.013 gi|22748617 defensin, beta 105A precursor [Homo sapiens] 35 0.013 gi|103485141 defensin, beta 105B precursor [Homo sapiens] 35 0.013 gi|169202989 PREDICTED: similar to defensin, beta 131 [Homo sapi... 35 0.017 gi|169203494 PREDICTED: similar to defensin, beta 131 [Homo sapi... 35 0.017 gi|169202282 PREDICTED: similar to defensin, beta 131 [Homo sapi... 35 0.017 gi|239743495 PREDICTED: hypothetical protein XP_002342880 [Homo ... 35 0.017 gi|22748611 defensin, beta 106A precursor [Homo sapiens] 35 0.017 gi|103485143 defensin, beta 106B precursor [Homo sapiens] 35 0.017 gi|82734217 beta-defensin 112 [Homo sapiens] 34 0.022 gi|8923890 defensin, beta 103A precursor [Homo sapiens] 34 0.028 gi|125656159 beta-defensin 103B precursor [Homo sapiens] 34 0.028 gi|23503331 defensin, beta 123 precursor [Homo sapiens] 32 0.083 gi|82734214 beta-defensin 111 [Homo sapiens] 32 0.14 gi|83582798 beta-defensin 115 [Homo sapiens] 30 0.31 gi|58865339 defensin, beta 121 [Homo sapiens] 30 0.31 gi|83582794 beta-defensin 110 [Homo sapiens] 30 0.41 gi|239754319 PREDICTED: defensin, beta 133 [Homo sapiens] 30 0.54 gi|239748864 PREDICTED: defensin, beta 133 [Homo sapiens] 30 0.54 gi|239742893 PREDICTED: beta-defensin 133 [Homo sapiens] 30 0.54 gi|4557733 latent transforming growth factor beta binding protei... 29 0.70 gi|53729325 nuclear receptor subfamily 6, group A, member 1 isof... 29 0.91 gi|53729327 nuclear receptor subfamily 6, group A, member 1 isof... 29 0.91 gi|18250304 beta defensin 129 precursor [Homo sapiens] 29 0.91 gi|126091070 sperm associated antigen 11B isoform E precursor [H... 28 1.6 gi|126131097 sperm associated antigen 11B isoform D preproprotei... 28 1.6 >gi|82734219 beta-defensin 114 [Homo sapiens] Length = 69 Score = 153 bits (387), Expect = 2e-38 Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE 60 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE Sbjct: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE 60 Query: 61 KLYEEDDMF 69 KLYEEDDMF Sbjct: 61 KLYEEDDMF 69 >gi|149944551 defensin, beta 131 [Homo sapiens] Length = 70 Score = 38.1 bits (87), Expect = 0.002 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE 60 MR+ +++ + + F +P + ++ D C Y C+ C E I C+ ICC Sbjct: 1 MRVLFFVFGVLSLMFTVPPARSFISNDECPSEYYHCRLKCNADEHAIRYCA-DFSICCKL 59 Query: 61 KLYEED 66 K+ E D Sbjct: 60 KIIEID 65 >gi|169173154 PREDICTED: hypothetical protein [Homo sapiens] Length = 70 Score = 35.0 bits (79), Expect = 0.013 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE 60 MR+ +++ + + +P + ++ D C Y C+ C E I C+ ICC Sbjct: 1 MRVLFFVFGVLSLMSTVPPARSFISNDECPSEYYHCRLKCNADEHAIRYCA-DFSICCKL 59 Query: 61 KLYEED 66 K+ E D Sbjct: 60 KIIEID 65 >gi|169172390 PREDICTED: similar to defensin, beta 131 [Homo sapiens] Length = 70 Score = 35.0 bits (79), Expect = 0.013 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE 60 MR+ +++ + + +P + ++ D C Y C+ C E I C+ ICC Sbjct: 1 MRVLFFVFGVLSLMSTVPPARSFISNDECPSEYYHCRLKCNADEHAIRYCA-DFSICCKL 59 Query: 61 KLYEED 66 K+ E D Sbjct: 60 KIIEID 65 >gi|169172906 PREDICTED: similar to defensin, beta 131 [Homo sapiens] Length = 70 Score = 35.0 bits (79), Expect = 0.013 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE 60 MR+ +++ + + +P + ++ D C Y C+ C E I C+ ICC Sbjct: 1 MRVLFFVFGVLSLMSTVPPRRSFISNDECPSEYYHCRLKCNADEHAITYCA-DFSICCKL 59 Query: 61 KLYEED 66 K+ E D Sbjct: 60 KIIEID 65 >gi|22748617 defensin, beta 105A precursor [Homo sapiens] Length = 78 Score = 35.0 bits (79), Expect = 0.013 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 14/74 (18%) Query: 2 RIFYYLHFLCYVTFILPATCT-------------LVNADRCTKRYGRCKRDCLESEKQID 48 + FY+L + ++ LP+ C + C G+C+++CLE+EK Sbjct: 6 KTFYFLFAMFFILVQLPSGCQAGLDFSQPFPSGEFAVCESCKLGRGKCRKECLENEKPDG 65 Query: 49 ICSLPRKICCTEKL 62 C L +CC +++ Sbjct: 66 NCRL-NFLCCRQRI 78 >gi|103485141 defensin, beta 105B precursor [Homo sapiens] Length = 78 Score = 35.0 bits (79), Expect = 0.013 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 14/74 (18%) Query: 2 RIFYYLHFLCYVTFILPATCT-------------LVNADRCTKRYGRCKRDCLESEKQID 48 + FY+L + ++ LP+ C + C G+C+++CLE+EK Sbjct: 6 KTFYFLFAMFFILVQLPSGCQAGLDFSQPFPSGEFAVCESCKLGRGKCRKECLENEKPDG 65 Query: 49 ICSLPRKICCTEKL 62 C L +CC +++ Sbjct: 66 NCRL-NFLCCRQRI 78 >gi|169202989 PREDICTED: similar to defensin, beta 131 [Homo sapiens] Length = 70 Score = 34.7 bits (78), Expect = 0.017 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE 60 MR+ +++ + + +P T + + D C Y C+ C E I C+ ICC Sbjct: 1 MRVLFFVFGVLSLMSTVPPTRSFTSNDECPSEYYHCRLKCNADEHAIRYCA-DFSICCKL 59 Query: 61 KLYEED 66 K+ + D Sbjct: 60 KIIQID 65 >gi|169203494 PREDICTED: similar to defensin, beta 131 [Homo sapiens] Length = 70 Score = 34.7 bits (78), Expect = 0.017 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE 60 MR+ +++ + + +P T + + D C Y C+ C E I C+ ICC Sbjct: 1 MRVLFFVFGVLSLMSTVPPTRSFTSNDECPSEYYHCRLKCNADEHAIRYCA-DFSICCKL 59 Query: 61 KLYEED 66 K+ + D Sbjct: 60 KIIQID 65 >gi|169202282 PREDICTED: similar to defensin, beta 131 [Homo sapiens] Length = 70 Score = 34.7 bits (78), Expect = 0.017 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE 60 MR+ +++ + + +P T + + D C Y C+ C E I C+ ICC Sbjct: 1 MRVLFFVFGVLSLMSTVPPTRSFTSNDECPSEYYHCRLKCNADEHAIRYCA-DFSICCKL 59 Query: 61 KLYEED 66 K+ + D Sbjct: 60 KIIQID 65 >gi|239743495 PREDICTED: hypothetical protein XP_002342880 [Homo sapiens] Length = 70 Score = 34.7 bits (78), Expect = 0.017 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTE 60 MR+ +++ + + +P + ++ D C Y C+ C E I C+ ICC Sbjct: 1 MRVLFFVFGVLSLMSTVPPARSFISNDECPSEYYHCRLKCNADEHVIRYCAY-FSICCKL 59 Query: 61 KLYEED 66 K+ E D Sbjct: 60 KIIEID 65 >gi|22748611 defensin, beta 106A precursor [Homo sapiens] Length = 65 Score = 34.7 bits (78), Expect = 0.017 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCT 59 MR F +L + + F+ PA + ++C K G CK +C ++E+ I +C K C T Sbjct: 1 MRTFLFLFAVLF--FLTPAKNAFFD-EKCNKLKGTCKNNCGKNEELIALCQKSLKCCRT 56 >gi|103485143 defensin, beta 106B precursor [Homo sapiens] Length = 65 Score = 34.7 bits (78), Expect = 0.017 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCT 59 MR F +L + + F+ PA + ++C K G CK +C ++E+ I +C K C T Sbjct: 1 MRTFLFLFAVLF--FLTPAKNAFFD-EKCNKLKGTCKNNCGKNEELIALCQKSLKCCRT 56 >gi|82734217 beta-defensin 112 [Homo sapiens] Length = 113 Score = 34.3 bits (77), Expect = 0.022 Identities = 14/30 (46%), Positives = 17/30 (56%) Query: 29 CTKRYGRCKRDCLESEKQIDICSLPRKICC 58 CT GRCK C +SE +I C+ P CC Sbjct: 54 CTAIGGRCKNQCDDSEFRISYCARPTTHCC 83 >gi|8923890 defensin, beta 103A precursor [Homo sapiens] Length = 67 Score = 33.9 bits (76), Expect = 0.028 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 1 MRIFYYLHFLCYVTFI-LPATCTLVNADR---CTKRYGRCK-RDCLESEKQIDICSLPRK 55 MRI Y L L ++ + +P ++N + C R GRC CL E+QI CS + Sbjct: 1 MRIHYLLFALLFLFLVPVPGHGGIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGR 60 Query: 56 ICCTEK 61 CC K Sbjct: 61 KCCRRK 66 >gi|125656159 beta-defensin 103B precursor [Homo sapiens] Length = 67 Score = 33.9 bits (76), Expect = 0.028 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 1 MRIFYYLHFLCYVTFI-LPATCTLVNADR---CTKRYGRCK-RDCLESEKQIDICSLPRK 55 MRI Y L L ++ + +P ++N + C R GRC CL E+QI CS + Sbjct: 1 MRIHYLLFALLFLFLVPVPGHGGIINTLQKYYCRVRGGRCAVLSCLPKEEQIGKCSTRGR 60 Query: 56 ICCTEK 61 CC K Sbjct: 61 KCCRRK 66 >gi|23503331 defensin, beta 123 precursor [Homo sapiens] Length = 67 Score = 32.3 bits (72), Expect = 0.083 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 7 LHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICCTEKLYE 64 L L +L + T RC YG+C+ C + E+ C + K+CC + Y+ Sbjct: 3 LLLLTLTVLLLLSQLTPGGTQRCWNLYGKCRYRCSKKERVYVYC-INNKMCCVKPKYQ 59 >gi|82734214 beta-defensin 111 [Homo sapiens] Length = 67 Score = 31.6 bits (70), Expect = 0.14 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 7/63 (11%) Query: 4 FYYLHFLCYVTFI-----LPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICC 58 F+ LHF +VT + P +L C G+CK C E+E +I C P CC Sbjct: 7 FFILHF--WVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPGTHCC 64 Query: 59 TEK 61 ++ Sbjct: 65 LQQ 67 >gi|83582798 beta-defensin 115 [Homo sapiens] Length = 88 Score = 30.4 bits (67), Expect = 0.31 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Query: 28 RCTKRYGRCKRDCLESEKQIDICSLPRKICCTEK 61 RC GRC++ C E E++ + C + ICC K Sbjct: 37 RCYYGTGRCRKSCKEIERKKEKCG-EKHICCVPK 69 >gi|58865339 defensin, beta 121 [Homo sapiens] Length = 76 Score = 30.4 bits (67), Expect = 0.31 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 6/53 (11%) Query: 16 ILPATCTLVNAD-----RCTKRYGRCKRDCLESEKQIDICSLPRKICCTEKLY 63 +L T TL+ A +C + GRC+ C ESE +C K CC + Y Sbjct: 5 LLLLTVTLLLAQVTPVMKCWGKSGRCRTTCKESEVYYILCKTEAK-CCVDPKY 56 >gi|83582794 beta-defensin 110 [Homo sapiens] Length = 62 Score = 30.0 bits (66), Expect = 0.41 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 4 FYYLHFLCYVTFILPATCTL---VNADRCTKRYGRCKRDCLESEKQIDICSLPRKICC 58 F+ LHF +VT ILPA +RC K G CK C + E C R CC Sbjct: 7 FFILHF--WVT-ILPARSNFEPKYRFERCEKVRGICKTFCDDVEYDYGYCIKWRSQCC 61 >gi|239754319 PREDICTED: defensin, beta 133 [Homo sapiens] Length = 61 Score = 29.6 bits (65), Expect = 0.54 Identities = 12/51 (23%), Positives = 23/51 (45%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICS 51 + +F ++ F V C + + C G+C+ +C + EK I C+ Sbjct: 3 IHVFLFVLFFFLVPIATRMKCAVKDTYSCFIMRGKCRHECHDFEKPIGFCT 53 >gi|239748864 PREDICTED: defensin, beta 133 [Homo sapiens] Length = 61 Score = 29.6 bits (65), Expect = 0.54 Identities = 12/51 (23%), Positives = 23/51 (45%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICS 51 + +F ++ F V C + + C G+C+ +C + EK I C+ Sbjct: 3 IHVFLFVLFFFLVPIATRMKCAVKDTYSCFIMRGKCRHECHDFEKPIGFCT 53 >gi|239742893 PREDICTED: beta-defensin 133 [Homo sapiens] Length = 61 Score = 29.6 bits (65), Expect = 0.54 Identities = 12/51 (23%), Positives = 23/51 (45%) Query: 1 MRIFYYLHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICS 51 + +F ++ F V C + + C G+C+ +C + EK I C+ Sbjct: 3 IHVFLFVLFFFLVPIATRMKCAVKDTYSCFIMRGKCRHECHDFEKPIGFCT 53 >gi|4557733 latent transforming growth factor beta binding protein 2 [Homo sapiens] Length = 1821 Score = 29.3 bits (64), Expect = 0.70 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Query: 7 LHFLCYVTFILPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLP-----RKIC 57 L LCY + + P TCTL A R TK+ C R + + C LP R+IC Sbjct: 670 LQGLCYRS-LGPGTCTLPLAQRITKQICCCSRVGKAWGSECEKCPLPGTEAFREIC 724 >gi|53729325 nuclear receptor subfamily 6, group A, member 1 isoform 1 [Homo sapiens] Length = 480 Score = 28.9 bits (63), Expect = 0.91 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 7/47 (14%) Query: 29 CTKRYGRCKRD--CLESEKQIDICSLPRKICCTE-----KLYEEDDM 68 C KR RC RD C+ S KQ + C R + C + K ED M Sbjct: 89 CNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGM 135 >gi|53729327 nuclear receptor subfamily 6, group A, member 1 isoform 2 [Homo sapiens] Length = 475 Score = 28.9 bits (63), Expect = 0.91 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 7/47 (14%) Query: 29 CTKRYGRCKRD--CLESEKQIDICSLPRKICCTE-----KLYEEDDM 68 C KR RC RD C+ S KQ + C R + C + K ED M Sbjct: 85 CNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGM 131 >gi|18250304 beta defensin 129 precursor [Homo sapiens] Length = 183 Score = 28.9 bits (63), Expect = 0.91 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%) Query: 28 RCTKRYGRCKRDCLESEKQIDICSLPRKICC 58 RC GRC+ C EK+I C + K CC Sbjct: 26 RCLMGLGRCRDHCNVDEKEIQKCKM--KKCC 54 >gi|126091070 sperm associated antigen 11B isoform E precursor [Homo sapiens] Length = 80 Score = 28.1 bits (61), Expect = 1.6 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 29 CTKRYGRCKRD-CLESEKQIDICSLPRKICCTEKLYEE 65 C + G C+ C EK+ DICS P CC EE Sbjct: 30 CHMQQGICRLFFCHSGEKKRDICSDPWNRCCVSNTDEE 67 >gi|126131097 sperm associated antigen 11B isoform D preproprotein [Homo sapiens] Length = 133 Score = 28.1 bits (61), Expect = 1.6 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 29 CTKRYGRCKRD-CLESEKQIDICSLPRKICCTEKLYEE 65 C + G C+ C EK+ DICS P CC EE Sbjct: 83 CHMQQGICRLFFCHSGEKKRDICSDPWNRCCVSNTDEE 120 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.334 0.145 0.495 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,920,286 Number of Sequences: 37866 Number of extensions: 108737 Number of successful extensions: 449 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 422 Number of HSP's gapped (non-prelim): 44 length of query: 69 length of database: 18,247,518 effective HSP length: 42 effective length of query: 27 effective length of database: 16,657,146 effective search space: 449742942 effective search space used: 449742942 T: 11 A: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.6 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.