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Search of human proteins with 82734214
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|82734214 beta-defensin 111 [Homo sapiens]
(67 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|82734214 beta-defensin 111 [Homo sapiens] 151 1e-37
gi|83582794 beta-defensin 110 [Homo sapiens] 63 4e-11
gi|82734217 beta-defensin 112 [Homo sapiens] 51 2e-07
gi|239754319 PREDICTED: defensin, beta 133 [Homo sapiens] 39 7e-04
gi|239748864 PREDICTED: defensin, beta 133 [Homo sapiens] 39 7e-04
gi|239742893 PREDICTED: beta-defensin 133 [Homo sapiens] 39 7e-04
gi|169166494 PREDICTED: hypothetical protein [Homo sapiens] 39 0.001
gi|50344744 beta-defensin 108B [Homo sapiens] 39 0.001
gi|239753808 PREDICTED: hypothetical protein [Homo sapiens] 38 0.002
gi|239748372 PREDICTED: hypothetical protein [Homo sapiens] 38 0.002
gi|22748611 defensin, beta 106A precursor [Homo sapiens] 34 0.029
gi|103485139 defensin, beta 104A precursor [Homo sapiens] 34 0.029
gi|103485143 defensin, beta 106B precursor [Homo sapiens] 34 0.029
gi|103485137 defensin, beta 104B precursor [Homo sapiens] 34 0.029
gi|83582796 beta-defensin 113 [Homo sapiens] 33 0.049
gi|22748617 defensin, beta 105A precursor [Homo sapiens] 33 0.064
gi|103485141 defensin, beta 105B precursor [Homo sapiens] 33 0.064
gi|74136827 beta-defensin 134 [Homo sapiens] 32 0.083
gi|17402931 sperm associated antigen 11B isoform C preproprotein... 32 0.11
gi|82734219 beta-defensin 114 [Homo sapiens] 32 0.14
gi|239749357 PREDICTED: hypothetical protein XP_002347009 [Homo ... 29 0.92
gi|37704382 defensin, beta 119 isoform a precursor [Homo sapiens] 29 0.92
gi|10047102 ribosomal protein L24-like [Homo sapiens] 28 1.2
gi|83582800 beta-defensin 116 [Homo sapiens] 28 1.2
gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens] 27 4.6
gi|21040279 defensin, beta 127 preproprotein [Homo sapiens] 27 4.6
gi|18250304 beta defensin 129 precursor [Homo sapiens] 26 5.9
>gi|82734214 beta-defensin 111 [Homo sapiens]
Length = 67
Score = 151 bits (381), Expect = 1e-37
Identities = 67/67 (100%), Positives = 67/67 (100%)
Query: 1 MKIQLFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPG 60
MKIQLFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPG
Sbjct: 1 MKIQLFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPG 60
Query: 61 THCCLQQ 67
THCCLQQ
Sbjct: 61 THCCLQQ 67
>gi|83582794 beta-defensin 110 [Homo sapiens]
Length = 62
Score = 63.2 bits (152), Expect = 4e-11
Identities = 32/66 (48%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 1 MKIQLFFFILHFWVTILPAKKKY-PEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRP 59
MKIQLFFFILHFWVTILPA+ + P+Y C G CK C + E YCI+
Sbjct: 1 MKIQLFFFILHFWVTILPARSNFEPKYRF----ERCEKVRGICKTFCDDVEYDYGYCIKW 56
Query: 60 GTHCCL 65
+ CC+
Sbjct: 57 RSQCCV 62
>gi|82734217 beta-defensin 112 [Homo sapiens]
Length = 113
Score = 51.2 bits (121), Expect = 2e-07
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 33 RECRIGNGQCKNQCHENEIRIAYCIRPGTHCCLQQ 67
+ C G+CKNQC ++E RI+YC RP THCC+ +
Sbjct: 52 KSCTAIGGRCKNQCDDSEFRISYCARPTTHCCVTE 86
>gi|239754319 PREDICTED: defensin, beta 133 [Homo sapiens]
Length = 61
Score = 39.3 bits (90), Expect = 7e-04
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 1 MKIQLFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPG 60
MKI +F F+L F++ + + K + C I G+C+++CH+ E I +C +
Sbjct: 1 MKIHVFLFVLFFFLVPIATRMKCAVKDTYS----CFIMRGKCRHECHDFEKPIGFCTKLN 56
Query: 61 THC 63
+C
Sbjct: 57 ANC 59
>gi|239748864 PREDICTED: defensin, beta 133 [Homo sapiens]
Length = 61
Score = 39.3 bits (90), Expect = 7e-04
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 1 MKIQLFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPG 60
MKI +F F+L F++ + + K + C I G+C+++CH+ E I +C +
Sbjct: 1 MKIHVFLFVLFFFLVPIATRMKCAVKDTYS----CFIMRGKCRHECHDFEKPIGFCTKLN 56
Query: 61 THC 63
+C
Sbjct: 57 ANC 59
>gi|239742893 PREDICTED: beta-defensin 133 [Homo sapiens]
Length = 61
Score = 39.3 bits (90), Expect = 7e-04
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 1 MKIQLFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPG 60
MKI +F F+L F++ + + K + C I G+C+++CH+ E I +C +
Sbjct: 1 MKIHVFLFVLFFFLVPIATRMKCAVKDTYS----CFIMRGKCRHECHDFEKPIGFCTKLN 56
Query: 61 THC 63
+C
Sbjct: 57 ANC 59
>gi|169166494 PREDICTED: hypothetical protein [Homo sapiens]
Length = 73
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Query: 1 MKIQLFFFILHFWVT-ILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRP 59
M+I + F + F+++ +LPA+ K+ E C NG C++ C E EI + C+
Sbjct: 1 MRIAVLLFAIFFFMSQVLPARGKFKEI--------CERPNGSCRDFCLETEIHVGRCLN- 51
Query: 60 GTHCCL 65
CCL
Sbjct: 52 SRPCCL 57
>gi|50344744 beta-defensin 108B [Homo sapiens]
Length = 73
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Query: 1 MKIQLFFFILHFWVT-ILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRP 59
M+I + F + F+++ +LPA+ K+ E C NG C++ C E EI + C+
Sbjct: 1 MRIAVLLFAIFFFMSQVLPARGKFKEI--------CERPNGSCRDFCLETEIHVGRCLN- 51
Query: 60 GTHCCL 65
CCL
Sbjct: 52 SQPCCL 57
>gi|239753808 PREDICTED: hypothetical protein [Homo sapiens]
Length = 83
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 5 LFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPGTHCC 64
L F I F +LPA+ K+ E C NG C++ C E EI + C+ CC
Sbjct: 16 LLFAIFFFMSQVLPARGKFKEI--------CERPNGSCRDFCLETEIHVGRCLN-SRPCC 66
Query: 65 L 65
L
Sbjct: 67 L 67
>gi|239748372 PREDICTED: hypothetical protein [Homo sapiens]
Length = 83
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 5 LFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPGTHCC 64
L F I F +LPA+ K+ E C NG C++ C E EI + C+ CC
Sbjct: 16 LLFAIFFFMSQVLPARGKFKEI--------CERPNGSCRDFCLETEIHVGRCLN-SRPCC 66
Query: 65 L 65
L
Sbjct: 67 L 67
>gi|22748611 defensin, beta 106A precursor [Homo sapiens]
Length = 65
Score = 33.9 bits (76), Expect = 0.029
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 1 MKIQLFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPG 60
M+ LF F + F++T PAK + + +C G CKN C +NE IA C +
Sbjct: 1 MRTFLFLFAVLFFLT--PAKNAFFD-------EKCNKLKGTCKNNCGKNEELIALC-QKS 50
Query: 61 THCC 64
CC
Sbjct: 51 LKCC 54
>gi|103485139 defensin, beta 104A precursor [Homo sapiens]
Length = 72
Score = 33.9 bits (76), Expect = 0.029
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 24 PEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPGTH-CCLQQ 67
P +L R C G +C+ +C E RI C P T+ CCL++
Sbjct: 19 PVRSEFELDRICGYGTARCRKKCRSQEYRIGRC--PNTYACCLRK 61
>gi|103485143 defensin, beta 106B precursor [Homo sapiens]
Length = 65
Score = 33.9 bits (76), Expect = 0.029
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 1 MKIQLFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPG 60
M+ LF F + F++T PAK + + +C G CKN C +NE IA C +
Sbjct: 1 MRTFLFLFAVLFFLT--PAKNAFFD-------EKCNKLKGTCKNNCGKNEELIALC-QKS 50
Query: 61 THCC 64
CC
Sbjct: 51 LKCC 54
>gi|103485137 defensin, beta 104B precursor [Homo sapiens]
Length = 72
Score = 33.9 bits (76), Expect = 0.029
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 24 PEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPGTH-CCLQQ 67
P +L R C G +C+ +C E RI C P T+ CCL++
Sbjct: 19 PVRSEFELDRICGYGTARCRKKCRSQEYRIGRC--PNTYACCLRK 61
>gi|83582796 beta-defensin 113 [Homo sapiens]
Length = 82
Score = 33.1 bits (74), Expect = 0.049
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 1 MKIQLFFFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYC-IRP 59
MKI F F V+ P+ + + +REC++ G CK +C+ E YC + P
Sbjct: 1 MKILCIFLTFVFTVSCGPSVPQKKTREVAERKRECQLVRGACKPECNSWEYVYYYCNVNP 60
Query: 60 GTHCC 64
CC
Sbjct: 61 ---CC 62
>gi|22748617 defensin, beta 105A precursor [Homo sapiens]
Length = 78
Score = 32.7 bits (73), Expect = 0.064
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 6 FFFILHFWVTILPA--------KKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCI 57
F F + F + LP+ + +P G + C++G G+C+ +C ENE C
Sbjct: 10 FLFAMFFILVQLPSGCQAGLDFSQPFPS-GEFAVCESCKLGRGKCRKECLENEKPDGNC- 67
Query: 58 RPGTHCCLQQ 67
R CC Q+
Sbjct: 68 RLNFLCCRQR 77
>gi|103485141 defensin, beta 105B precursor [Homo sapiens]
Length = 78
Score = 32.7 bits (73), Expect = 0.064
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 6 FFFILHFWVTILPA--------KKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCI 57
F F + F + LP+ + +P G + C++G G+C+ +C ENE C
Sbjct: 10 FLFAMFFILVQLPSGCQAGLDFSQPFPS-GEFAVCESCKLGRGKCRKECLENEKPDGNC- 67
Query: 58 RPGTHCCLQQ 67
R CC Q+
Sbjct: 68 RLNFLCCRQR 77
>gi|74136827 beta-defensin 134 [Homo sapiens]
Length = 66
Score = 32.3 bits (72), Expect = 0.083
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 7 FFILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPGTHCCLQ 66
F L W +L S ++ ++C NG C+ +C+E+E+ +AYC+ CC++
Sbjct: 8 FVFLFLWDPVLAGINSL----SSEMHKKC-YKNGICRLECYESEMLVAYCMFQ-LECCVK 61
>gi|17402931 sperm associated antigen 11B isoform C preproprotein
[Homo sapiens]
Length = 113
Score = 32.0 bits (71), Expect = 0.11
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 34 ECRIGNGQCKNQCHENEIRIAYCIRPGTHCCL 65
+CR G C+ C+ E ++ YC + CCL
Sbjct: 81 DCRRSEGFCQEYCNYMETQVGYCSKKKDACCL 112
>gi|82734219 beta-defensin 114 [Homo sapiens]
Length = 69
Score = 31.6 bits (70), Expect = 0.14
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 7 FFILHF--WVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPGTHCC 64
F+ LHF +VT + P +L C G+CK C E+E +I C P CC
Sbjct: 4 FYYLHFLCYVTFI-----LPATCTLVNADRCTKRYGRCKRDCLESEKQIDICSLPRKICC 58
Query: 65 LQQ 67
++
Sbjct: 59 TEK 61
>gi|239749357 PREDICTED: hypothetical protein XP_002347009 [Homo
sapiens]
Length = 111
Score = 28.9 bits (63), Expect = 0.92
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 35 CRIGNGQCKNQCHENEIRIAYCIRPGTHCCL 65
C NG C++ C E EI + C+ CCL
Sbjct: 66 CERPNGSCQDFCLETEIHVGRCLN-SRPCCL 95
>gi|37704382 defensin, beta 119 isoform a precursor [Homo sapiens]
Length = 84
Score = 28.9 bits (63), Expect = 0.92
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 9 ILHFWVTILPAKKKYPEYGSLDLRRECRIGNGQCKNQCHENEIRIAYCIRPGTHCCLQ 66
+L+ ++ IL A ++ G + R C +G C+ C +NE YC R CCLQ
Sbjct: 3 LLYLFLAILLAIEEPVISGKRHILR-CMGNSGICRASCKKNEQPYLYC-RNCQSCCLQ 58
>gi|10047102 ribosomal protein L24-like [Homo sapiens]
Length = 163
Score = 28.5 bits (62), Expect = 1.2
Identities = 10/27 (37%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 23 YPEYGSLDLRRECRIGNGQCKNQCHEN 49
YP +G + +R +C++ CK++CH+N
Sbjct: 14 YPGHGMMFVRNDCKVFR-FCKSKCHKN 39
>gi|83582800 beta-defensin 116 [Homo sapiens]
Length = 102
Score = 28.5 bits (62), Expect = 1.2
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 35 CRIGNGQCKNQCHENEIRIAYCIRPGTHCCLQ 66
C + G C+N C E EI+ C CCL+
Sbjct: 40 CELYQGMCRNACREYEIQYLTCPN-DQKCCLK 70
>gi|31377568 signal peptide, CUB domain, EGF-like 3 [Homo sapiens]
Length = 993
Score = 26.6 bits (57), Expect = 4.6
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Query: 34 ECRIGNGQCKNQC------HENEIRIAYCIRPGTHCCLQQ 67
EC GNG C+ C +E R + + H C+Q+
Sbjct: 115 ECAEGNGGCQQSCVNMMGSYECHCREGFFLSDNQHTCIQR 154
>gi|21040279 defensin, beta 127 preproprotein [Homo sapiens]
Length = 99
Score = 26.6 bits (57), Expect = 4.6
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 40 GQCKNQCHENEIRIAYCIRPGTHCCL 65
G C+ C NE+ A C G +CCL
Sbjct: 31 GHCRKICRVNEVPEALC-ENGRYCCL 55
>gi|18250304 beta defensin 129 precursor [Homo sapiens]
Length = 183
Score = 26.2 bits (56), Expect = 5.9
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 33 RECRIGNGQCKNQCHENEIRIAYC 56
R C +G G+C++ C+ +E I C
Sbjct: 25 RRCLMGLGRCRDHCNVDEKEIQKC 48
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.332 0.146 0.510
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,928,631
Number of Sequences: 37866
Number of extensions: 104121
Number of successful extensions: 318
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 290
Number of HSP's gapped (non-prelim): 30
length of query: 67
length of database: 18,247,518
effective HSP length: 40
effective length of query: 27
effective length of database: 16,732,878
effective search space: 451787706
effective search space used: 451787706
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.