Guide to the Human Genome
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Name: TAC1 Sequence: fasta or formatted (96aa) NCBI GI: 7770079
Description:

tachykinin 1 isoform delta precursor

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [129aa] tachykinin 1 isoform beta precursor
alt prot [111aa] tachykinin 1 isoform alpha precursor
alt prot [114aa] tachykinin 1 isoform gamma precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3          8           1
 C cysteine            0.0          0           0
 D aspartate           6.2          6           2
 E glutamate           8.3          8           2
 F phenylalanine       6.2          6           2
 G glycine             5.2          5           1
 H histidine           3.1          3           1
 I isoleucine          5.2          5           1
 K lysine              5.2          5           1
 L leucine             9.4          9           2
 M methionine          4.2          4           1
 N asparagine          3.1          3           1
 P proline             4.2          4           1
 Q glutamine           7.3          7           2
 R arginine            8.3          8           3
 S serine              5.2          5           1
 T threonine           1.0          1           1
 V valine              3.1          3           1
 W tryptophan          2.1          2           1
 Y tyrosine            4.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tachykinin 1 isoform delta precursor 
TAC1                  0.943   tachykinin 1 isoform alpha precursor 
TAC1                  0.931   tachykinin 1 isoform gamma precursor 
TAC1                  0.874   tachykinin 1 isoform beta precursor 
ACE                   0.017   angiotensin I converting enzyme 1 isoform 1 precursor...
TAC4                  0.017   tachykinin 4 isoform alpha 
TAC4                  0.011   tachykinin 4 isoform alpha-2 
DNHD1                 0.011   dynein heavy chain domain 1 isoform 1 
APP                   0.011   amyloid beta A4 protein isoform c precursor 
APP                   0.011   amyloid beta A4 protein isoform b precursor 
APP                   0.011   amyloid beta A4 protein isoform a precursor 
APP                   0.011   amyloid beta A4 protein isoform e precursor 
APP                   0.011   amyloid beta A4 protein isoform f precursor 
TOR1AIP1              0.011   lamina-associated polypeptide 1B 
TAC4                  0.006   tachykinin 4 isoform beta 
RAP1GAP               0.006   RAP1 GTPase activating protein isoform c 
RAP1GAP               0.006   RAP1 GTPase activating protein isoform a 
RAP1GAP               0.006   RAP1 GTPase activating protein isoform b 
PDZD8                 0.006   PDZ domain containing 8 
TAC4                  0.006   tachykinin 4 isoform delta 
TAC4                  0.006   tachykinin 4 isoform gamma 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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