Guide to the Human Genome
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Name: TOB2 Sequence: fasta or formatted (344aa) NCBI GI: 7706739
Description:

transducer of ERBB2, 2

Referenced in:

Additional Cell Cycle Functions
Epidermal Growth Factor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         27           2
 C cysteine            0.9          3           1
 D aspartate           3.5         12           2
 E glutamate           5.5         19           2
 F phenylalanine       6.1         21           2
 G glycine            10.8         37           3
 H histidine           1.2          4           1
 I isoleucine          3.2         11           2
 K lysine              5.8         20           3
 L leucine             8.1         28           2
 M methionine          2.0          7           1
 N asparagine          4.4         15           1
 P proline             8.1         28           2
 Q glutamine           5.2         18           2
 R arginine            2.9         10           3
 S serine             11.9         41           3
 T threonine           3.5         12           2
 V valine              5.8         20           2
 W tryptophan          0.6          2           1
 Y tyrosine            2.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transducer of ERBB2, 2 
TOB1                  0.506   transducer of ERBB2, 1 
BTG1                  0.127   B-cell translocation protein 1 
BTG2                  0.115   B-cell translocation gene 2 
BTG3                  0.087   B-cell translocation gene 3 isoform b 
BTG3                  0.075   B-cell translocation gene 3 isoform a 
BTG4                  0.069   B-cell translocation gene 4 
POM121                0.025   nuclear pore membrane protein 121 
DACH1                 0.021   dachshund homolog 1 isoform b 
DACH1                 0.021   dachshund homolog 1 isoform a 
DACH1                 0.021   dachshund homolog 1 isoform c 
SP7                   0.021   osterix 
LOC100288540          0.019   PREDICTED: hypothetical protein XP_002342775 
CNOT3                 0.018   CCR4-NOT transcription complex, subunit 3 
POM121C               0.018   POM121 membrane glycoprotein (rat)-like 
EVX2                  0.018   even-skipped homeobox 2 
ZBTB10                0.018   zinc finger and BTB domain containing 10 isoform b ...
ZBTB10                0.018   zinc finger and BTB domain containing 10 isoform a ...
MN1                   0.015   meningioma  1 
EN1                   0.013   engrailed homeobox 1 
MEF2C                 0.013   myocyte enhancer factor 2C isoform 2 
HR                    0.013   hairless protein isoform a 
HR                    0.013   hairless protein isoform b 
IRS2                  0.013   insulin receptor substrate 2 
SP8                   0.013   Sp8 transcription factor isoform 1 
SP8                   0.013   Sp8 transcription factor isoform 2 
TRO                   0.013   trophinin isoform 5 
ZIC2                  0.013   zinc finger protein of the cerebellum 2 
LOR                   0.013   loricrin 
BHLHE22               0.013   basic helix-loop-helix domain containing, class B, 5...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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