Search of human proteins with 7705708

Search of human proteins with 7705708

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7705708 hypothetical protein LOC51066 [Homo sapiens]
         (353 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7705708 hypothetical protein LOC51066 [Homo sapiens]               746   0.0  
gi|122937349 glutaredoxin, cysteine rich 1 [Homo sapiens]              41   0.001
gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens]                   41   0.002
gi|122891874 keratin associated protein 5-5 [Homo sapiens]             38   0.016
gi|169160953 PREDICTED: hypothetical LOC644006 [Homo sapiens]          36   0.046
gi|239747623 PREDICTED: hypothetical protein XP_002347917 [Homo ...    36   0.046
gi|88943822 PREDICTED: hypothetical protein LOC644006 [Homo sapi...    36   0.060
gi|19743901 RAR-related orphan receptor A isoform b [Homo sapiens]     35   0.078
gi|4504777 integrin, beta 7 [Homo sapiens]                             35   0.078
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ...    35   0.10 
gi|122937474 glutaredoxin, cysteine rich 2 [Homo sapiens]              35   0.10 
gi|54400749 keratin associated protein 5-1 [Homo sapiens]              35   0.10 
gi|4506561 ring finger protein 4 [Homo sapiens]                        34   0.17 
gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo ...    34   0.17 
gi|20336182 paired basic amino acid cleaving system 4 isoform g ...    34   0.17 
gi|4505577 paired basic amino acid cleaving system 4 isoform a p...    34   0.17 
gi|108773804 Fraser syndrome 1 [Homo sapiens]                          34   0.17 
gi|47717112 zinc finger, FYVE domain containing 9 isoform 1 [Hom...    34   0.17 
gi|47717106 zinc finger, FYVE domain containing 9 isoform 3 [Hom...    34   0.17 
gi|6552337 zinc finger, FYVE domain containing 9 isoform 2 [Homo...    34   0.17 
gi|239755070 PREDICTED: similar to proprotein convertase subtili...    33   0.30 
gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo ...    33   0.30 
gi|13994372 keratin associated protein 17-1 [Homo sapiens]             33   0.30 
gi|123702038 keratin associated protein 5-9 [Homo sapiens]             32   0.66 
gi|116284373 peroxisome proliferative activated receptor gamma i...    32   0.86 
gi|20336229 peroxisome proliferative activated receptor gamma is...    32   0.86 
gi|116284368 peroxisome proliferative activated receptor gamma i...    32   0.86 
gi|116284370 peroxisome proliferative activated receptor gamma i...    32   0.86 
gi|205360958 cysteine-rich with EGF-like domains 2 isoform b [Ho...    32   0.86 
gi|157694513 leucine-rich repeat-containing G protein-coupled re...    32   0.86 

>gi|7705708 hypothetical protein LOC51066 [Homo sapiens]
          Length = 353

 Score =  746 bits (1926), Expect = 0.0
 Identities = 353/353 (100%), Positives = 353/353 (100%)

Query: 1   MPSPVGLLRALPLPWPQFLACTLRRLAGPRESTGPSQKPPPLCSVPCRVPAMTEEVAREA 60
           MPSPVGLLRALPLPWPQFLACTLRRLAGPRESTGPSQKPPPLCSVPCRVPAMTEEVAREA
Sbjct: 1   MPSPVGLLRALPLPWPQFLACTLRRLAGPRESTGPSQKPPPLCSVPCRVPAMTEEVAREA 60

Query: 61  LLSFVDSKCCYSSTVAGDLVIQELKRQTLCRYRLETFSESRISEWTFQPFTNHSVDGPQR 120
           LLSFVDSKCCYSSTVAGDLVIQELKRQTLCRYRLETFSESRISEWTFQPFTNHSVDGPQR
Sbjct: 61  LLSFVDSKCCYSSTVAGDLVIQELKRQTLCRYRLETFSESRISEWTFQPFTNHSVDGPQR 120

Query: 121 GASPRLWDIKVQGPPMFQEDTRKFQVPHSSLVKECHKCHGRGRYKCSGCHGAGTVRCPSC 180
           GASPRLWDIKVQGPPMFQEDTRKFQVPHSSLVKECHKCHGRGRYKCSGCHGAGTVRCPSC
Sbjct: 121 GASPRLWDIKVQGPPMFQEDTRKFQVPHSSLVKECHKCHGRGRYKCSGCHGAGTVRCPSC 180

Query: 181 CGAKRKAKQSRRCQLCAGSGRRRCSTCSGRGNKTCATCKGEKKLLHFIQLVIMWKNSLFE 240
           CGAKRKAKQSRRCQLCAGSGRRRCSTCSGRGNKTCATCKGEKKLLHFIQLVIMWKNSLFE
Sbjct: 181 CGAKRKAKQSRRCQLCAGSGRRRCSTCSGRGNKTCATCKGEKKLLHFIQLVIMWKNSLFE 240

Query: 241 FVSEHRLNCPRELLAKAKGENLFKDENSVVYPIVDFPLRDISLASQRGIAEHSAALASRA 300
           FVSEHRLNCPRELLAKAKGENLFKDENSVVYPIVDFPLRDISLASQRGIAEHSAALASRA
Sbjct: 241 FVSEHRLNCPRELLAKAKGENLFKDENSVVYPIVDFPLRDISLASQRGIAEHSAALASRA 300

Query: 301 RVLQQRQTIELIPLTEVHYWYQGKTYVYYIYGTDHQVYAVDYPERYCCGCTIV 353
           RVLQQRQTIELIPLTEVHYWYQGKTYVYYIYGTDHQVYAVDYPERYCCGCTIV
Sbjct: 301 RVLQQRQTIELIPLTEVHYWYQGKTYVYYIYGTDHQVYAVDYPERYCCGCTIV 353


>gi|122937349 glutaredoxin, cysteine rich 1 [Homo sapiens]
          Length = 290

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 115 VDGPQRGASPRLWDIKVQGPPM-FQEDTRKFQVPHSSLVKECHKCHGRGRYKCSGCHGAG 173
           +DG   G + ++  +   G          + Q PH     EC  C G G   CS CHG+ 
Sbjct: 203 IDGHYLGGAEKILSMNESGELQDILTKIERVQHPH-----ECPSCGGFGFLPCSVCHGSK 257

Query: 174 TVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSG 209
                +C     KA    +C  C  +G +RC  C+G
Sbjct: 258 MSMFRNCFTDSFKA---LKCTACNENGLQRCKNCAG 290


>gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens]
          Length = 99

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)

Query: 158 CHGRGRYKC--SGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSGRGNKTC 215
           C G GR  C  SGC G+ +  C  CC  +R+ +Q      C G G +R    + R +  C
Sbjct: 39  CCGSGRGCCGDSGCCGSSSTSC--CCFPRRRRRQRSSGCCCCGGGSQRSQRSNNRSSGCC 96

Query: 216 ATC 218
           + C
Sbjct: 97  SGC 99


>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
          Length = 237

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSG--RGN 212
           C  C G G   C+GC G G+  C   C  K        C  C+  G+  C +C G  RG 
Sbjct: 42  CGGCGGCGS-GCAGCGGCGSGCCVPVCCCKPMCCCVPACS-CSSCGKGGCGSCGGSKRGC 99

Query: 213 KTCATCKG 220
            +C   KG
Sbjct: 100 VSCGVSKG 107


>gi|169160953 PREDICTED: hypothetical LOC644006 [Homo sapiens]
          Length = 190

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%)

Query: 167 SGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTC---SGRGNKTCATCKGEKK 223
           +G   +GTV CP C     +  Q+RR  +    G   CS C   S +   TC TC+  KK
Sbjct: 122 TGLRPSGTVGCPICMDRYSEIVQNRRLIVSTECGHVFCSQCLRDSLKNANTCPTCR--KK 179

Query: 224 LLH 226
           + H
Sbjct: 180 INH 182


>gi|239747623 PREDICTED: hypothetical protein XP_002347917 [Homo
           sapiens]
          Length = 190

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 5/63 (7%)

Query: 167 SGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTC---SGRGNKTCATCKGEKK 223
           +G   +GTV CP C     +  Q+RR  +    G   CS C   S +   TC TC+  KK
Sbjct: 122 TGLRPSGTVGCPICMDRYSEIVQNRRLIVSTECGHVFCSQCLRDSLKNANTCPTCR--KK 179

Query: 224 LLH 226
           + H
Sbjct: 180 INH 182


>gi|88943822 PREDICTED: hypothetical protein LOC644006 [Homo
           sapiens]
          Length = 190

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 168 GCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTC---SGRGNKTCATCKGEKKL 224
           G   +GTV CP C     +  Q+RR  +    G   CS C   S +   TC TC+  KK+
Sbjct: 123 GLRPSGTVGCPICMDRYSEIVQNRRLIVSTECGHVFCSQCLRDSLKNANTCPTCR--KKI 180

Query: 225 LH 226
            H
Sbjct: 181 NH 182


>gi|19743901 RAR-related orphan receptor A isoform b [Homo sapiens]
          Length = 556

 Score = 35.4 bits (80), Expect = 0.078
 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 134 PPMFQEDTRKFQVPHSSLVKECHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQSRRC 193
           PP  Q++ ++ Q  + +   E   C   G  K SG H  G + C  C G  R+++QS   
Sbjct: 82  PPYSQKEDKEVQTGYMNAQIEIIPCKICGD-KSSGIH-YGVITCEGCKGFFRRSQQSNAT 139

Query: 194 QLCA--------GSGRRRCSTCSGRGNKTCATCKGEKKLLHFIQLVIMWKNSLFEFVSEH 245
             C          + R RC  C     + C      +  + F ++    ++SL+  V +H
Sbjct: 140 YSCPRQKNCLIDRTSRNRCQHCR---LQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKH 196

Query: 246 RL 247
           R+
Sbjct: 197 RM 198


>gi|4504777 integrin, beta 7 [Homo sapiens]
          Length = 798

 Score = 35.4 bits (80), Expect = 0.078
 Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 7/66 (10%)

Query: 158 CHGRGRYKCSGCH---GAGTVRCPSCCGAKRKAKQSRRCQLC----AGSGRRRCSTCSGR 210
           C G GR KC+ C    G     C  C G K   ++ R C  C     G     CST    
Sbjct: 613 CSGHGRCKCNRCQCLDGYYGALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAH 672

Query: 211 GNKTCA 216
            N T A
Sbjct: 673 TNVTLA 678



 Score = 34.7 bits (78), Expect = 0.13
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 158 CHGRGRYKCSGCHGAGTVRCPSC-CGAKRKAKQSRRCQLCAGSGRRRCSTC---SGRGNK 213
           C G GR +C  CH        +C C     +  S    LC+G GR +C+ C    G    
Sbjct: 574 CGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQCLDGYYGA 633

Query: 214 TCATCKGEK 222
            C  C G K
Sbjct: 634 LCDQCPGCK 642



 Score = 33.9 bits (76), Expect = 0.23
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 158 CHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSGRGNKTCAT 217
           C G+G  +C  C  +G       C     + +     LC G GR +C  C    N+T   
Sbjct: 537 CSGKGHCQCGRCSCSGQ-SSGHLCECDDASCERHEGILCGGFGRCQCGVCHCHANRTGRA 595

Query: 218 CK 219
           C+
Sbjct: 596 CE 597


>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
           [Homo sapiens]
          Length = 494

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 22/65 (33%), Positives = 26/65 (40%), Gaps = 9/65 (13%)

Query: 163 RYKCSGCHGAGTVRCPSC-CGAK---RKAKQSRRCQLCAGSGRRRCS-----TCSGRGNK 213
           RY    C G G   C  C C A    +K +  + C L A    R+C       CSGRG  
Sbjct: 282 RYSDDFCSGHGQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKC 341

Query: 214 TCATC 218
            C  C
Sbjct: 342 ECGKC 346



 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 158 CHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTC 207
           CH  GR KC    G+G V    C    R+       ++C G G+  C  C
Sbjct: 157 CHC-GRCKCDNSDGSGLVYGKFCECDDRECIDDETEEICGGHGKCYCGNC 205


>gi|122937474 glutaredoxin, cysteine rich 2 [Homo sapiens]
          Length = 248

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 7/68 (10%)

Query: 141 TRKFQVPHSSLVKECHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSG 200
           T++  +P  S    C  C G G   CS CHG+   +        +++ ++ RC  C  +G
Sbjct: 187 TQEGDIPEDS----CFHCRGSGSATCSLCHGS---KFSMLANRFKESYRALRCPACNENG 239

Query: 201 RRRCSTCS 208
            + C  C+
Sbjct: 240 LQPCQICN 247


>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
          Length = 278

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSGRGNKT 214
           C  C G      SGC G G+  C   C  K        C  C+  G+  C +C G     
Sbjct: 109 CGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACS-CSSCGKGGCGSC-GCSKGA 166

Query: 215 CATCKGEK 222
           C +C G K
Sbjct: 167 CGSCGGSK 174



 Score = 32.7 bits (73), Expect = 0.50
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 5/69 (7%)

Query: 155 CHKCHGRGRYKC-SGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSGR--G 211
           C  C G G   C SGC G+G+  C   C  K    +   C  C+  G+  C +  G   G
Sbjct: 21  CGGC-GSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCS-CSSCGKGGCGSSGGSKGG 78

Query: 212 NKTCATCKG 220
             +C  CKG
Sbjct: 79  CGSCGGCKG 87



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 22/65 (33%), Positives = 24/65 (36%), Gaps = 10/65 (15%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSGRGNKT 214
           C  C G      SGC G     C S CG          C  CAGS     S+CS      
Sbjct: 187 CGSCGGSKGGCGSGCGG-----CGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCS-----Q 236

Query: 215 CATCK 219
           C+ CK
Sbjct: 237 CSCCK 241


>gi|4506561 ring finger protein 4 [Homo sapiens]
          Length = 190

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 167 SGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTC---SGRGNKTCATCKGEKK 223
           +G   +GTV CP C     +  Q+ R  +    G   CS C   S +   TC TC+  KK
Sbjct: 122 TGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCR--KK 179

Query: 224 LLH 226
           + H
Sbjct: 180 INH 182


>gi|239743863 PREDICTED: hypothetical protein XP_002342982 [Homo
           sapiens]
          Length = 853

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 139 EDTRKFQVPHSSLVKECHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQSR-RCQLCA 197
           E T   +V   +    C  C   G Y C          C   CG      Q    C+ C 
Sbjct: 66  EKTYSEEVECKACDSNCGSCDQNGCYWCEEGFFLLGGSCVRKCGPGFYGDQEMGECESC- 124

Query: 198 GSGRRRCSTCSGRGNKTCATCKGEKKLL 225
               R C TC+G G+  C++C+   +LL
Sbjct: 125 ---HRACETCTGPGHDECSSCQEGLQLL 149



 Score = 33.5 bits (75), Expect = 0.30
 Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 23/80 (28%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSC--------------CGAKRKAKQ-SRRCQLCAGS 199
           C  CH     KC  C G    +C +C              C     A + S RC  C  S
Sbjct: 461 CKPCH----VKCFHCMGPAEDQCQTCPMNSLLLNTTCVKDCPEGYYADEDSNRCAHCHSS 516

Query: 200 GRRRCSTCSGRGNKTCATCK 219
               C TC GR ++ C +C+
Sbjct: 517 ----CRTCEGRHSRQCHSCR 532



 Score = 32.3 bits (72), Expect = 0.66
 Identities = 22/81 (27%), Positives = 27/81 (33%), Gaps = 25/81 (30%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSC----------------CGAKRKAKQSR-RCQLCA 197
           C +CH      C  C G G + C SC                 G  R  +  +  C+ C 
Sbjct: 610 CERCHPT----CDQCKGKGALNCLSCVWSYHLMGGICTSDCLVGEYRVGEGEKFNCEKCH 665

Query: 198 GSGRRRCSTCSGRGNKTCATC 218
            S    C  C G G K C  C
Sbjct: 666 ES----CMECKGPGAKNCTLC 682



 Score = 29.3 bits (64), Expect = 5.6
 Identities = 25/92 (27%), Positives = 30/92 (32%), Gaps = 28/92 (30%)

Query: 153 KECHKCHGRGRYKCSGCHGAGTVRCPSC-----------CGAKRKAKQSRR-------CQ 194
           KEC  CH      C  C  +GT  C +C           C A  K   S         C+
Sbjct: 409 KECRDCHK----SCLTCSSSGT--CTTCQKGLIMNPRGSCMANEKCSPSEYWDEDAPGCK 462

Query: 195 LCAGSGRRRCSTCSGRGNKTCATCKGEKKLLH 226
            C      +C  C G     C TC     LL+
Sbjct: 463 PC----HVKCFHCMGPAEDQCQTCPMNSLLLN 490



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 25/81 (30%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSC----------------CGAKRKAKQS-RRCQLCA 197
           C +C+      C GC G     C SC                C      +QS + C+ C 
Sbjct: 559 CERCNR----SCKGCQGPRPTDCLSCDRFFFLLRSKGECHRSCPDHYYVEQSTQTCERC- 613

Query: 198 GSGRRRCSTCSGRGNKTCATC 218
                 C  C G+G   C +C
Sbjct: 614 ---HPTCDQCKGKGALNCLSC 631


>gi|20336182 paired basic amino acid cleaving system 4 isoform g
           preproprotein [Homo sapiens]
          Length = 975

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 29/123 (23%)

Query: 115 VDGPQRGASPRLWDIKVQGPPMFQEDTRKFQVPHSSLVKECHKCHGRGRYKCSGCHGAGT 174
           ++ P+   SP   ++     P  +ED      P S+ + +   CH     K  GC G   
Sbjct: 657 LEPPKAALSPSQVEV-----PEDEEDYTAQSTPGSANILQTSVCHPECGDK--GCDGPNA 709

Query: 175 VRCPSCC----GAKRKAKQ--------------SRRCQLCAGSGRRRCSTCSGRGNKTCA 216
            +C +C     G+ + +++              +RRC+ C     + C TCS R    C 
Sbjct: 710 DQCLNCVHFSLGSVKTSRKCVSVCPLGYFGDTAARRCRRC----HKGCETCSSRAATQCL 765

Query: 217 TCK 219
           +C+
Sbjct: 766 SCR 768


>gi|4505577 paired basic amino acid cleaving system 4 isoform a
           preproprotein [Homo sapiens]
          Length = 969

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 29/123 (23%)

Query: 115 VDGPQRGASPRLWDIKVQGPPMFQEDTRKFQVPHSSLVKECHKCHGRGRYKCSGCHGAGT 174
           ++ P+   SP   ++     P  +ED      P S+ + +   CH     K  GC G   
Sbjct: 657 LEPPKAALSPSQVEV-----PEDEEDYTAQSTPGSANILQTSVCHPECGDK--GCDGPNA 709

Query: 175 VRCPSCC----GAKRKAKQ--------------SRRCQLCAGSGRRRCSTCSGRGNKTCA 216
            +C +C     G+ + +++              +RRC+ C     + C TCS R    C 
Sbjct: 710 DQCLNCVHFSLGSVKTSRKCVSVCPLGYFGDTAARRCRRC----HKGCETCSSRAATQCL 765

Query: 217 TCK 219
           +C+
Sbjct: 766 SCR 768


>gi|108773804 Fraser syndrome 1 [Homo sapiens]
          Length = 4011

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 27/95 (28%)

Query: 150 SLVKECHKCHGRGRYKCSGCHGAGTV------------------RCPSCCGAKRKAKQSR 191
           +LV  C  CH   ++  +  H  G++                   CPS   A+R A    
Sbjct: 801 NLVGYCADCHHLCQHCAADLHNTGSICLRCQNAHYLLLGDHCVPDCPSGYYAERGA---- 856

Query: 192 RCQLCAGSGRRRCSTCSGRGNKTCATCKGEKKLLH 226
            C+ C  S    C TC GRG  +C++C     L H
Sbjct: 857 -CKKCHSS----CRTCQGRGPFSCSSCDTNLVLSH 886



 Score = 32.0 bits (71), Expect = 0.86
 Identities = 25/94 (26%), Positives = 33/94 (35%), Gaps = 28/94 (29%)

Query: 155 CHKCHGRGRYK----CSGCH------GAGTVRCPSC--------------CGAKRKAKQS 190
           C    G+G Y     CS C       G  + RC +C              C     A  +
Sbjct: 543 CESSCGKGFYNRQGTCSACDQSCDSCGPSSPRCLTCTEKTVLHDGKCMSECPGGYYADAT 602

Query: 191 RRCQLCAGSGRRRCSTCSGRGNKTCATCKGEKKL 224
            RC++C  S    C++CSG     C  C   K L
Sbjct: 603 GRCKVCHNS----CASCSGPTPSHCTACSPPKAL 632


>gi|47717112 zinc finger, FYVE domain containing 9 isoform 1 [Homo
           sapiens]
          Length = 1366

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 8/105 (7%)

Query: 99  ESRISEWTFQPFTNHSVDGPQRGASPRLWDIKVQGPPMFQEDTRKFQVPHSSLVKECHKC 158
           ES  +E + +P    + D P        + I  + P     +     VP S     C KC
Sbjct: 650 ESYEAEISTRPCLALAPDSPDNDLRAGQFGISARKPFTTLGEVAPVWVPDSQ-APNCMKC 708

Query: 159 HGRGRY--KCSGCHGAGTVRCPSCCGAKRK-----AKQSRRCQLC 196
             R  +  +   C   G V C SCC  K K      K++R C +C
Sbjct: 709 EARFTFTKRRHHCRACGKVFCASCCSLKCKLLYMDRKEARVCVIC 753


>gi|47717106 zinc finger, FYVE domain containing 9 isoform 3 [Homo
           sapiens]
          Length = 1425

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 8/105 (7%)

Query: 99  ESRISEWTFQPFTNHSVDGPQRGASPRLWDIKVQGPPMFQEDTRKFQVPHSSLVKECHKC 158
           ES  +E + +P    + D P        + I  + P     +     VP S     C KC
Sbjct: 650 ESYEAEISTRPCLALAPDSPDNDLRAGQFGISARKPFTTLGEVAPVWVPDSQ-APNCMKC 708

Query: 159 HGRGRY--KCSGCHGAGTVRCPSCCGAKRK-----AKQSRRCQLC 196
             R  +  +   C   G V C SCC  K K      K++R C +C
Sbjct: 709 EARFTFTKRRHHCRACGKVFCASCCSLKCKLLYMDRKEARVCVIC 753


>gi|6552337 zinc finger, FYVE domain containing 9 isoform 2 [Homo
           sapiens]
          Length = 762

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 8/105 (7%)

Query: 99  ESRISEWTFQPFTNHSVDGPQRGASPRLWDIKVQGPPMFQEDTRKFQVPHSSLVKECHKC 158
           ES  +E + +P    + D P        + I  + P     +     VP S     C KC
Sbjct: 650 ESYEAEISTRPCLALAPDSPDNDLRAGQFGISARKPFTTLGEVAPVWVPDSQ-APNCMKC 708

Query: 159 HGRGRY--KCSGCHGAGTVRCPSCCGAKRK-----AKQSRRCQLC 196
             R  +  +   C   G V C SCC  K K      K++R C +C
Sbjct: 709 EARFTFTKRRHHCRACGKVFCASCCSLKCKLLYMDRKEARVCVIC 753


>gi|239755070 PREDICTED: similar to proprotein convertase
           subtilisin/kexin type 5 [Homo sapiens]
          Length = 853

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 5/72 (6%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQSR-RCQLCAGSGRRRCSTCSGRGNK 213
           C  C   G Y C          C   CG      Q    C+ C     R C TC+G G+ 
Sbjct: 82  CSSCDQNGCYWCEEGFFLLGGSCVRKCGPGFYGDQEMGECESC----HRACETCTGPGHD 137

Query: 214 TCATCKGEKKLL 225
            C++C+   +LL
Sbjct: 138 ECSSCQEGLQLL 149



 Score = 33.5 bits (75), Expect = 0.30
 Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 23/80 (28%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSC--------------CGAKRKAKQ-SRRCQLCAGS 199
           C  CH     KC  C G    +C +C              C     A + S RC  C  S
Sbjct: 461 CKPCH----VKCFHCMGPAEDQCQTCPMNSLLLNTTCVKDCPEGYYADEDSNRCAHCHSS 516

Query: 200 GRRRCSTCSGRGNKTCATCK 219
               C TC GR ++ C +C+
Sbjct: 517 ----CRTCEGRHSRQCHSCR 532



 Score = 32.3 bits (72), Expect = 0.66
 Identities = 22/81 (27%), Positives = 27/81 (33%), Gaps = 25/81 (30%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSC----------------CGAKRKAKQSR-RCQLCA 197
           C +CH      C  C G G + C SC                 G  R  +  +  C+ C 
Sbjct: 610 CERCHPT----CDQCKGKGALNCLSCVWSYHLMGGICTSDCLVGEYRVGEGEKFNCEKCH 665

Query: 198 GSGRRRCSTCSGRGNKTCATC 218
            S    C  C G G K C  C
Sbjct: 666 ES----CMECKGPGAKNCTLC 682



 Score = 29.6 bits (65), Expect = 4.3
 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 12/73 (16%)

Query: 153 KECHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQS-------RRCQLCAGSGRRRCS 205
           + C  C G G  +CS C     +    C  A +  ++        R+ Q C  S    C 
Sbjct: 126 RACETCTGPGHDECSSCQEGLQLLRGMCVHATKTQEEGKFWNDILRKLQPCHSS----CK 181

Query: 206 TCSGRGNKTCATC 218
           TC+G     C +C
Sbjct: 182 TCNGSAT-LCTSC 193



 Score = 29.3 bits (64), Expect = 5.6
 Identities = 25/92 (27%), Positives = 30/92 (32%), Gaps = 28/92 (30%)

Query: 153 KECHKCHGRGRYKCSGCHGAGTVRCPSC-----------CGAKRKAKQSRR-------CQ 194
           KEC  CH      C  C  +GT  C +C           C A  K   S         C+
Sbjct: 409 KECRDCHK----SCLTCSSSGT--CTTCQKGLIMNPRGSCMANEKCSPSEYWDEDAPGCK 462

Query: 195 LCAGSGRRRCSTCSGRGNKTCATCKGEKKLLH 226
            C      +C  C G     C TC     LL+
Sbjct: 463 PC----HVKCFHCMGPAEDQCQTCPMNSLLLN 490



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 25/81 (30%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSC----------------CGAKRKAKQS-RRCQLCA 197
           C +C+      C GC G     C SC                C      +QS + C+ C 
Sbjct: 559 CERCNR----SCKGCQGPRPTDCLSCDRFFFLLRSKGECHRSCPDHYYVEQSTQTCERC- 613

Query: 198 GSGRRRCSTCSGRGNKTCATC 218
                 C  C G+G   C +C
Sbjct: 614 ---HPTCDQCKGKGALNCLSC 631


>gi|239749596 PREDICTED: hypothetical protein XP_002347099 [Homo
           sapiens]
          Length = 853

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 23/80 (28%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSC--------------CGAKRKAKQ-SRRCQLCAGS 199
           C  CH     KC  C G    +C +C              C     A + S RC  C  S
Sbjct: 461 CKPCH----VKCFHCMGPAEDQCQTCPMNSLLLNTTCVKDCPEGYYADEDSNRCAHCHSS 516

Query: 200 GRRRCSTCSGRGNKTCATCK 219
               C TC GR ++ C +C+
Sbjct: 517 ----CRTCEGRHSRQCHSCR 532



 Score = 33.1 bits (74), Expect = 0.39
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 5/72 (6%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQSR-RCQLCAGSGRRRCSTCSGRGNK 213
           C  C   G Y C          C   CG      Q    C+ C     R C TC+G G+ 
Sbjct: 82  CGSCDQNGCYWCEEGFFLLGGSCVRKCGPGFYGDQEMGECESC----HRACETCTGPGHD 137

Query: 214 TCATCKGEKKLL 225
            C++C+   +LL
Sbjct: 138 ECSSCQEGLQLL 149



 Score = 32.3 bits (72), Expect = 0.66
 Identities = 22/81 (27%), Positives = 27/81 (33%), Gaps = 25/81 (30%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSC----------------CGAKRKAKQSR-RCQLCA 197
           C +CH      C  C G G + C SC                 G  R  +  +  C+ C 
Sbjct: 610 CERCHPT----CDQCKGKGALNCLSCVWSYHLMGGICTSDCLVGEYRVGEGEKFNCEKCH 665

Query: 198 GSGRRRCSTCSGRGNKTCATC 218
            S    C  C G G K C  C
Sbjct: 666 ES----CMECKGPGAKNCTLC 682



 Score = 29.6 bits (65), Expect = 4.3
 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 12/73 (16%)

Query: 153 KECHKCHGRGRYKCSGCHGAGTVRCPSCCGAKRKAKQS-------RRCQLCAGSGRRRCS 205
           + C  C G G  +CS C     +    C  A +  ++        R+ Q C  S    C 
Sbjct: 126 RACETCTGPGHDECSSCQEGLQLLRGMCVHATKTQEEGKFWNDILRKLQPCHSS----CK 181

Query: 206 TCSGRGNKTCATC 218
           TC+G     C +C
Sbjct: 182 TCNGSAT-LCTSC 193



 Score = 29.3 bits (64), Expect = 5.6
 Identities = 25/92 (27%), Positives = 30/92 (32%), Gaps = 28/92 (30%)

Query: 153 KECHKCHGRGRYKCSGCHGAGTVRCPSC-----------CGAKRKAKQSRR-------CQ 194
           KEC  CH      C  C  +GT  C +C           C A  K   S         C+
Sbjct: 409 KECRDCHK----SCLTCSSSGT--CTTCQKGLIMNPRGSCMANEKCSPSEYWDEDAPGCK 462

Query: 195 LCAGSGRRRCSTCSGRGNKTCATCKGEKKLLH 226
            C      +C  C G     C TC     LL+
Sbjct: 463 PC----HVKCFHCMGPAEDQCQTCPMNSLLLN 490



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 25/81 (30%)

Query: 155 CHKCHGRGRYKCSGCHGAGTVRCPSC----------------CGAKRKAKQS-RRCQLCA 197
           C +C+      C GC G     C SC                C      +QS + C+ C 
Sbjct: 559 CERCNR----SCKGCQGPRPTDCLSCDRFFFLLRSKGECHRSCPDHYYVEQSTQTCERC- 613

Query: 198 GSGRRRCSTCSGRGNKTCATC 218
                 C  C G+G   C +C
Sbjct: 614 ---HPTCDQCKGKGALNCLSC 631


>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
          Length = 105

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 21/69 (30%)

Query: 155 CHKCHGRGRYKC--SGCHGAGTVRCPSCCGAKRKAKQSRRCQLCAGSGRRRCSTCSGRGN 212
           C  C G G   C  SGC G       SCCG+            C GSG   C  C G G 
Sbjct: 32  CGSCCGCGGSGCGGSGCGG-------SCCGSS-----------CCGSGCGGCGGCGGCGG 73

Query: 213 KTC-ATCKG 220
             C ++C G
Sbjct: 74  GCCGSSCCG 82



 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 12/44 (27%)

Query: 158 CHGRGRYKCSGCHGAGTVRC-PSCCGAKRKAKQSRRCQLCAGSG 200
           C G G   C GC G G   C  SCCG+            C GSG
Sbjct: 57  CCGSGCGGCGGCGGCGGGCCGSSCCGSS-----------CCGSG 89


>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
          Length = 169

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 15/75 (20%)

Query: 155 CHKCHGRGRYKCSGCH------GAGTVRC-PSCCGAKRKAKQSRRCQLCAGSGRRRCSTC 207
           C  C G     C GC       G+G   C PSCC      K      +C       CS+C
Sbjct: 3   CCGCSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKP-----VCCCVPACSCSSC 57

Query: 208 SGRGNKTCATCKGEK 222
             RG   C +C G K
Sbjct: 58  GKRG---CGSCGGSK 69



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/86 (26%), Positives = 27/86 (31%), Gaps = 20/86 (23%)

Query: 155 CHKCHGRGRYKCSG----CHGAGTVRC----PSCCGA------------KRKAKQSRRCQ 194
           C  C  RG   C G    C   G  +C    P CC +            K    Q   C+
Sbjct: 54  CSSCGKRGCGSCGGSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCK 113

Query: 195 LCAGSGRRRCSTCSGRGNKTCATCKG 220
            C  S  R  S C     K C +  G
Sbjct: 114 PCCSSSGRGSSCCQSSCCKPCCSSSG 139


>gi|116284373 peroxisome proliferative activated receptor gamma
           isoform 1 [Homo sapiens]
          Length = 477

 Score = 32.0 bits (71), Expect = 0.86
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 24/90 (26%)

Query: 129 IKVQ--GPPMFQEDTRKFQVPH-----SSLVKECHKCHGR------GRYKCSGCHG--AG 173
           IKV+   PP + E T+ +  PH     S +  EC  C  +      G + C GC G    
Sbjct: 78  IKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRR 137

Query: 174 TV-------RCPSCCGAKRKAKQSRRCQLC 196
           T+       RC   C   +K++   +CQ C
Sbjct: 138 TIRLKLIYDRCDLNCRIHKKSR--NKCQYC 165


>gi|20336229 peroxisome proliferative activated receptor gamma
           isoform 2 [Homo sapiens]
          Length = 505

 Score = 32.0 bits (71), Expect = 0.86
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 24/90 (26%)

Query: 129 IKVQ--GPPMFQEDTRKFQVPH-----SSLVKECHKCHGR------GRYKCSGCHG--AG 173
           IKV+   PP + E T+ +  PH     S +  EC  C  +      G + C GC G    
Sbjct: 106 IKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRR 165

Query: 174 TV-------RCPSCCGAKRKAKQSRRCQLC 196
           T+       RC   C   +K++   +CQ C
Sbjct: 166 TIRLKLIYDRCDLNCRIHKKSR--NKCQYC 193


>gi|116284368 peroxisome proliferative activated receptor gamma
           isoform 1 [Homo sapiens]
          Length = 477

 Score = 32.0 bits (71), Expect = 0.86
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 24/90 (26%)

Query: 129 IKVQ--GPPMFQEDTRKFQVPH-----SSLVKECHKCHGR------GRYKCSGCHG--AG 173
           IKV+   PP + E T+ +  PH     S +  EC  C  +      G + C GC G    
Sbjct: 78  IKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRR 137

Query: 174 TV-------RCPSCCGAKRKAKQSRRCQLC 196
           T+       RC   C   +K++   +CQ C
Sbjct: 138 TIRLKLIYDRCDLNCRIHKKSR--NKCQYC 165


>gi|116284370 peroxisome proliferative activated receptor gamma
           isoform 1 [Homo sapiens]
          Length = 477

 Score = 32.0 bits (71), Expect = 0.86
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 24/90 (26%)

Query: 129 IKVQ--GPPMFQEDTRKFQVPH-----SSLVKECHKCHGR------GRYKCSGCHG--AG 173
           IKV+   PP + E T+ +  PH     S +  EC  C  +      G + C GC G    
Sbjct: 78  IKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRR 137

Query: 174 TV-------RCPSCCGAKRKAKQSRRCQLC 196
           T+       RC   C   +K++   +CQ C
Sbjct: 138 TIRLKLIYDRCDLNCRIHKKSR--NKCQYC 165


>gi|205360958 cysteine-rich with EGF-like domains 2 isoform b [Homo
           sapiens]
          Length = 353

 Score = 32.0 bits (71), Expect = 0.86
 Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 19/84 (22%)

Query: 154 ECHKCHGRGRYKCSG---CHGAGTVR---------------CPSCCGAKRKAKQSRRCQL 195
           +C  C G  +  CSG   C G G+ +               C  C      + ++    +
Sbjct: 136 DCLACQGGSQRPCSGNGHCSGDGSRQGDGSCRCHMGYQGPLCTDCMDGYFSSLRNETHSI 195

Query: 196 CAGSGRRRCSTCSGRGNKTCATCK 219
           C       C TCSG  N+ C  C+
Sbjct: 196 CTACDES-CKTCSGLTNRDCGECE 218


>gi|157694513 leucine-rich repeat-containing G protein-coupled
          receptor 4 [Homo sapiens]
          Length = 951

 Score = 32.0 bits (71), Expect = 0.86
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 14/47 (29%)

Query: 1  MPSPVGLLRALPLPWPQFLACTLRRLAGPRESTGPSQKPPPLCSVPC 47
          MP P+GLL  L L              G   S GPS   PPLC+ PC
Sbjct: 1  MPGPLGLLCFLAL--------------GLLGSAGPSGAAPPLCAAPC 33


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.136    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,579,898
Number of Sequences: 37866
Number of extensions: 778891
Number of successful extensions: 2893
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 2739
Number of HSP's gapped (non-prelim): 193
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.