Guide to the Human Genome
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Name: TXNDC12 Sequence: fasta or formatted (172aa) NCBI GI: 7705696
Description:

thioredoxin domain containing 12

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         10           3
 C cysteine            1.7          3           1
 D aspartate           5.8         10           1
 E glutamate          10.5         18           3
 F phenylalanine       5.2          9           1
 G glycine             9.3         16           2
 H histidine           4.1          7           1
 I isoleucine          5.2          9           2
 K lysine              7.6         13           2
 L leucine            10.5         18           3
 M methionine          2.3          4           1
 N asparagine          3.5          6           1
 P proline             5.2          9           1
 Q glutamine           1.7          3           1
 R arginine            3.5          6           1
 S serine              7.0         12           2
 T threonine           2.9          5           1
 V valine              4.7          8           2
 W tryptophan          1.2          2           1
 Y tyrosine            2.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin domain containing 12 
AGR3                  0.193   breast cancer membrane protein 11 
AGR2                  0.187   anterior gradient 2 homolog 
PDIA2                 0.039   protein disulfide isomerase A2 
PDIA5                 0.030   protein disulfide isomerase A5 
PDIA3                 0.030   protein disulfide-isomerase A3 precursor 
P4HB                  0.024   prolyl 4-hydroxylase, beta subunit precursor 
TXN2                  0.021   thioredoxin 2 precursor 
ARHGEF11              0.015   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.015   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
TXN                   0.012   thioredoxin 
PSME4                 0.012   proteasome (prosome, macropain) activator subunit 4...
TXNDC3                0.012   thioredoxin domain containing 3 
PDIA6                 0.009   protein disulfide isomerase A6 
BAI3                  0.009   brain-specific angiogenesis inhibitor 3 
GAK                   0.009   cyclin G associated kinase 
PDIA4                 0.009   protein disulfide isomerase A4 
ARID4B                0.009   AT rich interactive domain 4B isoform 2 
SLC5A3                0.009   solute carrier family 5 (inositol transporters), me...
FAM83G                0.009   hypothetical protein LOC644815 
ARID4B                0.009   AT rich interactive domain 4B isoform 1 
GPBP1L1               0.006   GC-rich promoter binding protein 1-like 1 
TMX1                  0.006   thioredoxin domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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