Guide to the Human Genome
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Name: PDIA6 Sequence: fasta or formatted (440aa) NCBI GI: 5031973
Description:

protein disulfide isomerase A6

Referenced in:

Additional Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         38           4
 C cysteine            1.6          7           1
 D aspartate           7.7         34           2
 E glutamate           7.3         32           2
 F phenylalanine       3.9         17           2
 G glycine             9.8         43           3
 H histidine           1.4          6           2
 I isoleucine          4.3         19           2
 K lysine              6.6         29           3
 L leucine            10.0         44           2
 M methionine          1.1          5           1
 N asparagine          3.0         13           1
 P proline             4.1         18           3
 Q glutamine           3.0         13           1
 R arginine            4.5         20           1
 S serine              7.3         32           3
 T threonine           3.9         17           1
 V valine              7.3         32           2
 W tryptophan          2.3         10           1
 Y tyrosine            2.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein disulfide isomerase A6 
PDIA4                 0.157   protein disulfide isomerase A4 
TXNDC5                0.138   thioredoxin domain containing 5 isoform 1 precursor ...
TXNDC5                0.138   thioredoxin domain containing 5 isoform 3 
DNAJC10               0.125   DnaJ (Hsp40) homolog, subfamily C, member 10 
PDIA5                 0.114   protein disulfide isomerase A5 
PDIA3                 0.098   protein disulfide-isomerase A3 precursor 
TMX3                  0.084   thioredoxin domain containing 10 
P4HB                  0.084   prolyl 4-hydroxylase, beta subunit precursor 
PDIA2                 0.062   protein disulfide isomerase A2 
TMX1                  0.048   thioredoxin domain containing 1 
QSOX2                 0.045   quiescin Q6 sulfhydryl oxidase 2 
QSOX1                 0.043   quiescin Q6 sulfhydryl oxidase 1 isoform b 
QSOX1                 0.043   quiescin Q6 sulfhydryl oxidase 1 isoform a 
ERP44                 0.042   thioredoxin domain containing 4 (endoplasmic reticul...
TXN2                  0.028   thioredoxin 2 precursor 
TMX4                  0.023   thioredoxin-related transmembrane protein 4 
TXNDC16               0.021   thioredoxin domain containing 16 isoform 2 
TXNDC16               0.021   thioredoxin domain containing 16 isoform 1 
TXNDC11               0.020   thioredoxin domain containing 11 
TXN                   0.017   thioredoxin 
TXNDC15               0.016   disulfide isomerase 
PDILT                 0.015   protein disulfide isomerase-like, testis expressed [...
DNAJC16               0.013   DnaJ (Hsp40) homolog, subfamily C, member 16 
GLRX3                 0.012   glutaredoxin 3 
TMX2                  0.010   thioredoxin domain containing 14 isoform 2 
TMX2                  0.010   thioredoxin domain containing 14 isoform 1 
TXNDC2                0.009   thioredoxin domain-containing 2 isoform 1 
TXNDC2                0.009   thioredoxin domain-containing 2 isoform 2 
TXNDC2                0.009   thioredoxin domain-containing 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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