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Search of human proteins with 7705684
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7705684 pleckstrin homology domain containing, family A
(phosphoinositide binding specific) member 9 [Homo sapiens]
(391 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7705684 pleckstrin homology domain containing, family A (phos... 776 0.0
gi|14249174 pleckstrin homology domain containing, family A (pho... 610 e-175
gi|7705987 glycolipid transfer protein [Homo sapiens] 104 2e-22
gi|54792084 pleckstrin homology domain containing, family A (pho... 67 2e-11
gi|71274150 glycolipid transfer protein domain containing 1 [Hom... 54 2e-07
gi|5453870 platelet-derived growth factor receptor alpha precurs... 35 0.089
gi|116089276 tetratricopeptide repeat domain 23-like [Homo sapiens] 34 0.20
gi|62526120 glycolipid transfer protein domain containing 2 [Hom... 34 0.20
gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens] 32 0.75
gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens] 32 0.75
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 32 0.75
gi|75677376 coiled-coil domain containing 62 isoform b [Homo sap... 32 1.3
gi|30348972 coiled-coil domain containing 62 isoform a [Homo sap... 32 1.3
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 32 1.3
gi|98986459 jumonji domain containing 2A [Homo sapiens] 31 1.7
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 31 1.7
gi|224465242 BTB (POZ) domain containing 8 [Homo sapiens] 30 2.9
gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo sa... 30 2.9
gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo sa... 30 2.9
gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo sa... 30 2.9
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 30 2.9
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 30 2.9
gi|164419758 bromodomain containing 2 [Homo sapiens] 30 2.9
gi|4826806 bromodomain containing 2 [Homo sapiens] 30 2.9
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 30 3.7
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 30 3.7
gi|82697315 RUN and FYVE domain containing 3 isoform 1 [Homo sap... 30 3.7
gi|51477714 mannosidase, alpha, class 2A, member 1 [Homo sapiens] 30 3.7
gi|239755184 PREDICTED: hypothetical protein [Homo sapiens] 30 4.9
gi|239749681 PREDICTED: hypothetical protein XP_002347118 [Homo ... 30 4.9
>gi|7705684 pleckstrin homology domain containing, family A
(phosphoinositide binding specific) member 9 [Homo
sapiens]
Length = 391
Score = 776 bits (2005), Expect = 0.0
Identities = 391/391 (100%), Positives = 391/391 (100%)
Query: 1 MSELRLCCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAA 60
MSELRLCCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAA
Sbjct: 1 MSELRLCCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAA 60
Query: 61 FTSELLYHTPPGSPQLAMLKSSKMKHPIIPIHNSLERQTELSTCENGSLNMEINGEEEIL 120
FTSELLYHTPPGSPQLAMLKSSKMKHPIIPIHNSLERQTELSTCENGSLNMEINGEEEIL
Sbjct: 61 FTSELLYHTPPGSPQLAMLKSSKMKHPIIPIHNSLERQTELSTCENGSLNMEINGEEEIL 120
Query: 121 MKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIMKEDRMENLKNHDNNLSQSGSDSSCS 180
MKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIMKEDRMENLKNHDNNLSQSGSDSSCS
Sbjct: 121 MKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIMKEDRMENLKNHDNNLSQSGSDSSCS 180
Query: 181 PECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCCAVVPVLDKLGPTVFAP 240
PECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCCAVVPVLDKLGPTVFAP
Sbjct: 181 PECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCCAVVPVLDKLGPTVFAP 240
Query: 241 VKMDLVENIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLK 300
VKMDLVENIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLK
Sbjct: 241 VKMDLVENIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLK 300
Query: 301 GFLTEVKNGEKDIQTALNNAYGKTLRQHHGWVVRGVFALALRATPSYEDFVAALTVKEGD 360
GFLTEVKNGEKDIQTALNNAYGKTLRQHHGWVVRGVFALALRATPSYEDFVAALTVKEGD
Sbjct: 301 GFLTEVKNGEKDIQTALNNAYGKTLRQHHGWVVRGVFALALRATPSYEDFVAALTVKEGD 360
Query: 361 HRKEAFSIGMQRDLSLYLPAMKKQMAILDAL 391
HRKEAFSIGMQRDLSLYLPAMKKQMAILDAL
Sbjct: 361 HRKEAFSIGMQRDLSLYLPAMKKQMAILDAL 391
>gi|14249174 pleckstrin homology domain containing, family A
(phosphoinositide binding specific) member 8 [Homo
sapiens]
Length = 440
Score = 610 bits (1572), Expect = e-175
Identities = 310/319 (97%), Positives = 311/319 (97%)
Query: 1 MSELRLCCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAA 60
MSELRL CDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAA
Sbjct: 117 MSELRLYCDLLVQQVDKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAA 176
Query: 61 FTSELLYHTPPGSPQLAMLKSSKMKHPIIPIHNSLERQTELSTCENGSLNMEINGEEEIL 120
FTSELLY TPPGSPQLAMLKSSKMKHPIIPIHNSLERQ ELSTCENGSLNMEINGEEEIL
Sbjct: 177 FTSELLYRTPPGSPQLAMLKSSKMKHPIIPIHNSLERQMELSTCENGSLNMEINGEEEIL 236
Query: 121 MKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIMKEDRMENLKNHDNNLSQSGSDSSCS 180
MKNKNSLYLKSAEIDCSISSEENTDDNITVQGEI KED MENLKNHDNNL+QSGSDSSCS
Sbjct: 237 MKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIRKEDGMENLKNHDNNLTQSGSDSSCS 296
Query: 181 PECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCCAVVPVLDKLGPTVFAP 240
PECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASC AVVPVLDKLGPTVFAP
Sbjct: 297 PECLWEEGKEVIPTFFSTMNTSFSDIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAP 356
Query: 241 VKMDLVENIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLK 300
VKMDLV NIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLK
Sbjct: 357 VKMDLVGNIKKVNQKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLK 416
Query: 301 GFLTEVKNGEKDIQTALNN 319
GFLTEVKNGEKDIQTAL N
Sbjct: 417 GFLTEVKNGEKDIQTALRN 435
>gi|7705987 glycolipid transfer protein [Homo sapiens]
Length = 209
Score = 104 bits (259), Expect = 2e-22
Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 7/152 (4%)
Query: 211 DSGIPTEAFLASCCAVVPVLDKLGPTVFAPVKMDLVENIKKVNQKYITNKEEFTTLQKIV 270
D I T FL + + P D LG VF P+K D+ NI K+ Y TN +F TLQ I+
Sbjct: 15 DKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNIL 74
Query: 271 LHEVEADVAQ-VRNSATEALLWLKRGLKFLKGFLTEVKNGEKD------IQTALNNAYGK 323
E E A+ + AT AL+WLKRGL+F++ FL + +GE+D I+ AY
Sbjct: 75 EVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEM 134
Query: 324 TLRQHHGWVVRGVFALALRATPSYEDFVAALT 355
L+++HGW+V+ +F AL A P DF+ AL+
Sbjct: 135 ALKKYHGWIVQKIFQAALYAAPYKSDFLKALS 166
>gi|54792084 pleckstrin homology domain containing, family A
(phosphoinositide binding specific) member 3 [Homo
sapiens]
Length = 300
Score = 67.4 bits (163), Expect = 2e-11
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 1 MSELRLCCDLLVQQVDKTKEVTTTGVSNS----EEGIDVGTLLKSTCNTFLKTLEECMQI 56
MSELRL CDLL+QQV +E ++S E + +LL +TCNTF+ TLEEC++I
Sbjct: 117 MSELRLYCDLLMQQVHTIQEFVHHDENHSSPSAENMNEASSLLSATCNTFITTLEECVKI 176
Query: 57 ANAAFTSEL--LYH----TPPGSPQLAMLKSSKMKHP 87
ANA F E+ L+H P SP + + HP
Sbjct: 177 ANAKFKPEMFQLHHPDPLVSPVSPSPVQMMKRSVSHP 213
>gi|71274150 glycolipid transfer protein domain containing 1 [Homo
sapiens]
Length = 214
Score = 53.9 bits (128), Expect = 2e-07
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 210 EDSGIPTEAFLASCCAVVPVLDKLGPTVFAPVKMDLVENIKKVNQ-KYITNKEEFTTLQK 268
E + + ++AS +V L+ LG T+F+ + D+V ++ + + + E + +LQ
Sbjct: 23 EKEEVLLDPYIASWKGLVRFLNSLG-TIFSFISKDVVSKLRIMERLRGGPQSEHYRSLQA 81
Query: 269 IVLHEVEADVAQVRN------SATEALLWLKRGLKFLKGFLTEVKNGEKDIQTAL--NNA 320
+V HE+ + + S +L L R L +L+ FL ++ +D +T+ ++
Sbjct: 82 MVAHELSNRLVDLERRSHHPESGCRTVLRLHRALHWLQLFLEGLRTSPEDARTSALCADS 141
Query: 321 YGKTLRQHHGWVVRGVFALALRATPSYEDFVAALTV 356
Y +L +H WVVR +A P+ E F+ A+ V
Sbjct: 142 YNASLAAYHPWVVRRAVTVAFCTLPTREVFLEAMNV 177
>gi|5453870 platelet-derived growth factor receptor alpha precursor
[Homo sapiens]
Length = 1089
Score = 35.4 bits (80), Expect = 0.089
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 246 VENIKKVN-----QKYITNKEEFTTLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLK 300
V+ +KKV + +I K F+ L+ + LHEV+ V +VR + WLK L ++
Sbjct: 299 VKEMKKVTISVHEKGFIEIKPTFSQLEAVNLHEVKHFVVEVRAYPPPRISWLKNNLTLIE 358
Query: 301 GFLTEVKNGEKDIQ 314
LTE+ + IQ
Sbjct: 359 N-LTEITTDVEKIQ 371
>gi|116089276 tetratricopeptide repeat domain 23-like [Homo sapiens]
Length = 361
Score = 34.3 bits (77), Expect = 0.20
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 265 TLQKIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLTEVKNGEKDIQTALNNAYGKT 324
T I L+E A + Q+R + +A+ +L++ TEV ++ L AY +
Sbjct: 251 TSDLISLYEEAAQIEQLRRNHNQAIQYLQQAHSVCVSLFTEVSPKTAEMSALLAKAYAMS 310
Query: 325 LRQHHGWVVRGVFAL---ALRATPSYEDFVAALTVKE 358
H V F A RAT EDF T +E
Sbjct: 311 GEAQHRDAVEIYFIRSINAYRATLGSEDFETLSTTEE 347
>gi|62526120 glycolipid transfer protein domain containing 2 [Homo
sapiens]
Length = 291
Score = 34.3 bits (77), Expect = 0.20
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 14/151 (9%)
Query: 208 LLEDSGIPTEAFLASCCAVVPVLDKLGPTVFAPVKMDLVENIKKVNQK-YITNKEEFTTL 266
L + + +LA A+V L LG +VFA + + + + + + E + +L
Sbjct: 93 LKPEGDVGLSPYLAGWRALVEFLTPLG-SVFAFATREAFTKVTDLEARVHGPDAEHYWSL 151
Query: 267 QKIVLHEVEADVAQ---------VRNSATEALLWLKRGLKFLKGFLTEVKNGE---KDIQ 314
+ E A + + R+S + LL L R L++ + L V G +
Sbjct: 152 AAMAAWERRAGLLEQPGAAPRDPTRSSGSRTLLLLHRALRWSQLCLHRVATGALGGPEAG 211
Query: 315 TALNNAYGKTLRQHHGWVVRGVFALALRATP 345
++AY L HH W+VR LA A P
Sbjct: 212 VQCSDAYRAALGPHHPWLVRQTARLAFLAFP 242
>gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens]
Length = 1453
Score = 32.3 bits (72), Expect = 0.75
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 73 SPQLAMLKSSKMKHPIIPIHNSLERQTELSTCENGSLNMEINGEEEILMKNKNSLYLKSA 132
S QL L+ K K + N L+ + E S +L++++ E +IL+K+KN L+++
Sbjct: 748 SSQLGSLE--KFKRQYGKVENPLDTEVEESNGVTTNLSLQV--EPDILLKDKNR--LENS 801
Query: 133 EIDCSISSEENTDDNITVQ--GEIMKEDRMENLKNHD 167
++ C I++ E++D + + Q I+ ++ K+ D
Sbjct: 802 DV-CKITTMEHSDSDSSCQPASHILNSEKFPFSKDED 837
>gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens]
Length = 1429
Score = 32.3 bits (72), Expect = 0.75
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 73 SPQLAMLKSSKMKHPIIPIHNSLERQTELSTCENGSLNMEINGEEEILMKNKNSLYLKSA 132
S QL L+ K K + N L+ + E S +L++++ E +IL+K+KN L+++
Sbjct: 748 SSQLGSLE--KFKRQYGKVENPLDTEVEESNGVTTNLSLQV--EPDILLKDKNR--LENS 801
Query: 133 EIDCSISSEENTDDNITVQ--GEIMKEDRMENLKNHD 167
++ C I++ E++D + + Q I+ ++ K+ D
Sbjct: 802 DV-CKITTMEHSDSDSSCQPASHILNSEKFPFSKDED 837
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 32.3 bits (72), Expect = 0.75
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 22/233 (9%)
Query: 95 LERQTELSTCENGSLNMEINGEEEILMKNKNSLYLKSAEIDCSISSEENTDDNITVQGEI 154
L Q E E L ++ E E +L ++ + + +E N N E+
Sbjct: 837 LSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHLNTK---EL 893
Query: 155 MKEDRME--NLKNHDNNLS-QSGSDSSCSPECLWEEGKEVIPTFFSTMNTSFSDI----E 207
+K + E LK H +N+ Q S SS KE + S + + + E
Sbjct: 894 LKNAQKEIATLKQHLSNMEVQVASQSSQRTGKGQPSNKEDVDDLVSQLRQTEEQVNDLKE 953
Query: 208 LLEDSGIPTEAFLASCCAVVPVLDKLGPTVFAPVKMDLVENIKKVNQKYITNKEEFTTLQ 267
L+ S E + A ++ L+K + + E ++K + + EF T
Sbjct: 954 RLKTSTSNVEQYQAMVTSLEESLNK---------EKQVTEEVRKNIEVRLKESAEFQTQL 1004
Query: 268 KIVLHEVEADVAQVRNSATEALLWLKRGLKFLKGFLTEVKNGEKDIQTALNNA 320
+ L EVE + ++++ A+ +++ L LK L+ V+N ++Q AL A
Sbjct: 1005 EKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQN---EVQEALQRA 1054
>gi|75677376 coiled-coil domain containing 62 isoform b [Homo
sapiens]
Length = 684
Score = 31.6 bits (70), Expect = 1.3
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 75 QLAMLKSSKMKHPIIPIHNS----LERQTELSTCENGSLNMEINGEEEILM----KNKNS 126
+L + SK + +HN +++Q++L LN + +E++ K + S
Sbjct: 266 ELLNIAKSKQERTNSELHNLRQIYVKQQSDLQF-----LNFNVENSQELIQMYDSKMEES 320
Query: 127 LYLKSAEIDCSISSEENTDDNITVQGEIMKEDRMENLKNHDNNLSQSGSDSSCSPECLWE 186
L S+ D +S EN + ++ E ++ ++ K + Q+ SD S EC +
Sbjct: 321 KALDSSR-DMCLSDLENNHPKVDIKREKNQKSLFKDQKFEAMLVQQNRSDKSSCDEC--K 377
Query: 187 EGKEVIPTFFS-----TMNTSFSDIELLEDSGIP 215
E K+ I T F T+++ F+ +L+E +P
Sbjct: 378 EKKQQIDTVFGEKSVITLSSIFTK-DLVEKHNLP 410
>gi|30348972 coiled-coil domain containing 62 isoform a [Homo
sapiens]
Length = 682
Score = 31.6 bits (70), Expect = 1.3
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 75 QLAMLKSSKMKHPIIPIHNS----LERQTELSTCENGSLNMEINGEEEILM----KNKNS 126
+L + SK + +HN +++Q++L LN + +E++ K + S
Sbjct: 266 ELLNIAKSKQERTNSELHNLRQIYVKQQSDLQF-----LNFNVENSQELIQMYDSKMEES 320
Query: 127 LYLKSAEIDCSISSEENTDDNITVQGEIMKEDRMENLKNHDNNLSQSGSDSSCSPECLWE 186
L S+ D +S EN + ++ E ++ ++ K + Q+ SD S EC +
Sbjct: 321 KALDSSR-DMCLSDLENNHPKVDIKREKNQKSLFKDQKFEAMLVQQNRSDKSSCDEC--K 377
Query: 187 EGKEVIPTFFS-----TMNTSFSDIELLEDSGIP 215
E K+ I T F T+++ F+ +L+E +P
Sbjct: 378 EKKQQIDTVFGEKSVITLSSIFTK-DLVEKHNLP 410
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 31.6 bits (70), Expect = 1.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 33 IDVGTLLKSTCNTFLKTLEECMQIANAAFTSELLYHTP 70
+D+GT+ K N + + ECMQ N FT+ +Y+ P
Sbjct: 81 MDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKP 118
>gi|98986459 jumonji domain containing 2A [Homo sapiens]
Length = 1064
Score = 31.2 bits (69), Expect = 1.7
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 16 DKTKEVTTTGVSNSEEGIDVGTLLKSTCNTFLKTLEECMQIANAAFTSELLYHTPPGSPQ 75
++ E GV + EEG +L K T K C++I SEL S Q
Sbjct: 367 EECPEEDMEGVEDGEEGDLKTSLAKHRIGT--KRHRVCLEIPQEVSQSELFPKEDLSSEQ 424
Query: 76 LAMLKSSKMKHPIIPIHNSLERQTELSTCENGSLNMEINGEE 117
M + P+ P H+S+ + + T + S + E+ EE
Sbjct: 425 YEMTECPAALAPVRPTHSSVRQVEDGLTFPDYSDSTEVKFEE 466
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 31.2 bits (69), Expect = 1.7
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 80 KSSKMKHPIIPIHNSLERQTELSTCENGSLNMEING---EEEILMKNKNSLYLKSAEIDC 136
++ +++ + P ++ + E N S+ E+ E E L K SL + +
Sbjct: 1695 ENDRLRAEVHPAGDTAKECMETLLSSNASMKEELERVKMEYETLSKKFQSLMSEKDSL-- 1752
Query: 137 SISSEENTDDNITVQGEIMKEDRMENLKNHDN--NLSQSGSDS 177
SEE D ++G + K+ +E + HDN N+++ G+ S
Sbjct: 1753 ---SEEVQDLKHQIEGNVSKQANLEATEKHDNQTNVTEEGTQS 1792
>gi|224465242 BTB (POZ) domain containing 8 [Homo sapiens]
Length = 378
Score = 30.4 bits (67), Expect = 2.9
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 94 SLERQTELSTCENGSLNMEINGEEEILMKNKNSLYLKSAEIDCSISSEENTDDNITVQGE 153
+LE +T L + + N++ N EEEIL K + + ++D S EN+ D + E
Sbjct: 108 ALEFRTFLQIIYSSNRNIK-NYEEEILRKKIMEIGISQKQLDISFPKCENSSDCSLQKHE 166
Query: 154 IMKE--DRMENLKNHDN 168
I ++ DR ++ ++DN
Sbjct: 167 IPEDISDRDDDFISNDN 183
>gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo
sapiens]
Length = 653
Score = 30.4 bits (67), Expect = 2.9
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 119 ILMKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIMKEDRMENLKNHDNNLSQSGSDSS 178
+++ + L+ K AE+ + D ++ EI K+ M L+N +NN + S
Sbjct: 225 VMISKHDCLFPKDAEL------QSKPQDGVSNNNEIQKKATMGQLQNKENN----NTKDS 274
Query: 179 CSPECLWEEGK 189
S +C W++ +
Sbjct: 275 PSRQCSWDKSE 285
>gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo
sapiens]
Length = 655
Score = 30.4 bits (67), Expect = 2.9
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 119 ILMKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIMKEDRMENLKNHDNNLSQSGSDSS 178
+++ + L+ K AE+ + D ++ EI K+ M L+N +NN + S
Sbjct: 227 VMISKHDCLFPKDAEL------QSKPQDGVSNNNEIQKKATMGQLQNKENN----NTKDS 276
Query: 179 CSPECLWEEGK 189
S +C W++ +
Sbjct: 277 PSRQCSWDKSE 287
>gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo
sapiens]
Length = 748
Score = 30.4 bits (67), Expect = 2.9
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 119 ILMKNKNSLYLKSAEIDCSISSEENTDDNITVQGEIMKEDRMENLKNHDNNLSQSGSDSS 178
+++ + L+ K AE+ + D ++ EI K+ M L+N +NN + S
Sbjct: 320 VMISKHDCLFPKDAEL------QSKPQDGVSNNNEIQKKATMGQLQNKENN----NTKDS 369
Query: 179 CSPECLWEEGK 189
S +C W++ +
Sbjct: 370 PSRQCSWDKSE 380
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 30.4 bits (67), Expect = 2.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 33 IDVGTLLKSTCNTFLKTLEECMQIANAAFTSELLYHTP 70
+D+GT+ K N + +EC+Q N FT+ +Y+ P
Sbjct: 105 MDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKP 142
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 30.4 bits (67), Expect = 2.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 33 IDVGTLLKSTCNTFLKTLEECMQIANAAFTSELLYHTP 70
+D+GT+ K N + +EC+Q N FT+ +Y+ P
Sbjct: 105 MDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKP 142
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 30.4 bits (67), Expect = 2.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 30 EEGIDVGTLLKSTCNTFLKTLEECMQIANAAFTSELLYHTP 70
++ +D+GT+ + N + ECMQ N FT+ +Y+ P
Sbjct: 118 KQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKP 158
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 30.4 bits (67), Expect = 2.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 30 EEGIDVGTLLKSTCNTFLKTLEECMQIANAAFTSELLYHTP 70
++ +D+GT+ + N + ECMQ N FT+ +Y+ P
Sbjct: 118 KQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKP 158
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 30.0 bits (66), Expect = 3.7
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 93 NSLERQTELSTCENGSLNMEINGEEEILMKNKNSLYLKSAEIDCSISSEENT---DDNIT 149
NS +++ S + N + +G ++L ++ KS IS E++ DDN T
Sbjct: 233 NSAGMKSKESGENSEQANTQDSGGSQLLEHPSRKIFRKSR-----ISEEDDRSELDDNNT 287
Query: 150 VQGEIMKEDRMENLKNHDNNLSQSGSDSSCSPECLWEEGKE 190
+ E +K D EN + D LSQ DS + E+ KE
Sbjct: 288 M--EEVKSDSTENSNSRDTGLSQPRRDSKGDSQ---EDSKE 323
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 30.0 bits (66), Expect = 3.7
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 93 NSLERQTELSTCENGSLNMEINGEEEILMKNKNSLYLKSAEIDCSISSEENT---DDNIT 149
NS +++ S + N + +G ++L ++ KS IS E++ DDN T
Sbjct: 217 NSAGMKSKESGENSEQANTQDSGGSQLLEHPSRKIFRKSR-----ISEEDDRSELDDNNT 271
Query: 150 VQGEIMKEDRMENLKNHDNNLSQSGSDSSCSPECLWEEGKE 190
+ E +K D EN + D LSQ DS + E+ KE
Sbjct: 272 M--EEVKSDSTENSNSRDTGLSQPRRDSKGDSQ---EDSKE 307
>gi|82697315 RUN and FYVE domain containing 3 isoform 1 [Homo
sapiens]
Length = 620
Score = 30.0 bits (66), Expect = 3.7
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 34 DVGTLLKSTCNTFLKTLEECMQIANAAFTSELLYHTPPGSPQLAMLKSSKMKHPIIPIHN 93
D+G KS N+ L+ E+ Q+A E S Q A L + K N
Sbjct: 416 DLGVKQKSELNSRLE--EKTNQMAATIKQLEQRLRQAERSRQSAELDNRLFKQDFGDKIN 473
Query: 94 SLERQTELSTCENGSLNMEINGEEEILMKNKNSLYLKSAEIDCSISSEENTDDNITVQGE 153
SL+ + E T + L +E+ E+E ++N S+ + ++ SE D +Q E
Sbjct: 474 SLQLEVEELTRQRNQLELELKQEKERRLQNDRSIPGRGSQ-----KSESKMDGKHKMQEE 528
Query: 154 IMK 156
+K
Sbjct: 529 NVK 531
>gi|51477714 mannosidase, alpha, class 2A, member 1 [Homo sapiens]
Length = 1144
Score = 30.0 bits (66), Expect = 3.7
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
Query: 76 LAMLKSSKMKHPIIPIHN-----SLERQTELS------TCENGSLNME-INGEEEILMKN 123
L+ + SS M HP+IP+ N +LE Q E S C+ +N+ I + N
Sbjct: 1005 LSHITSSLMNHPVIPMANKFSSPTLELQGEFSPLQSSLPCDIHLVNLRTIQSKVGNGHSN 1064
Query: 124 KNSLYLKSAEIDCSISSEENTDDNITVQGEIM 155
+ +L L DC SS+ T QG+I+
Sbjct: 1065 EAALILHRKGFDCRFSSKGTGLFCSTTQGKIL 1096
>gi|239755184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 125
Score = 29.6 bits (65), Expect = 4.9
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 7/35 (20%)
Query: 266 LQKIVLHEV-------EADVAQVRNSATEALLWLK 293
LQ +VLH+V EA A VR A EAL+WL+
Sbjct: 46 LQVLVLHQVLTEVDPREAGAAGVRKEAEEALVWLE 80
>gi|239749681 PREDICTED: hypothetical protein XP_002347118 [Homo
sapiens]
Length = 125
Score = 29.6 bits (65), Expect = 4.9
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 7/35 (20%)
Query: 266 LQKIVLHEV-------EADVAQVRNSATEALLWLK 293
LQ +VLH+V EA A VR A EAL+WL+
Sbjct: 46 LQVLVLHQVLTEVDPREAGAAGVRKEAEEALVWLE 80
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,677,904
Number of Sequences: 37866
Number of extensions: 572218
Number of successful extensions: 1416
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1396
Number of HSP's gapped (non-prelim): 49
length of query: 391
length of database: 18,247,518
effective HSP length: 104
effective length of query: 287
effective length of database: 14,309,454
effective search space: 4106813298
effective search space used: 4106813298
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.