Guide to the Human Genome
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Name: PLEKHA9 Sequence: fasta or formatted (391aa) NCBI GI: 7705684
Description:

pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 9

Referenced in:

Inositol Pathways
Additional Membrane Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         24           2
 C cysteine            2.6         10           2
 D aspartate           4.9         19           2
 E glutamate           9.7         38           3
 F phenylalanine       3.3         13           2
 G glycine             4.9         19           1
 H histidine           2.0          8           2
 I isoleucine          5.1         20           2
 K lysine              7.7         30           2
 L leucine            11.5         45           2
 M methionine          3.3         13           1
 N asparagine          5.9         23           2
 P proline             3.3         13           2
 Q glutamine           3.6         14           2
 R arginine            2.6         10           1
 S serine              7.9         31           2
 T threonine           7.2         28           3
 V valine              6.1         24           2
 W tryptophan          0.8          3           1
 Y tyrosine            1.5          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology domain containing, family A (phos... 
PLEKHA8               0.779   pleckstrin homology domain containing, family A (pho...
GLTP                  0.105   glycolipid transfer protein 
PLEKHA3               0.056   pleckstrin homology domain containing, family A (pho...
GLTPD1                0.039   glycolipid transfer protein domain containing 1 [Hom...
PDGFRA                0.013   platelet-derived growth factor receptor alpha precurs...
TTC23L                0.012   tetratricopeptide repeat domain 23-like 
GLTPD2                0.012   glycolipid transfer protein domain containing 2 [Hom...
MLH3                  0.009   mutL homolog 3 isoform 1 
MLH3                  0.009   mutL homolog 3 isoform 2 
TPR                   0.009   nuclear pore complex-associated protein TPR 
CCDC62                0.009   coiled-coil domain containing 62 isoform b 
CCDC62                0.009   coiled-coil domain containing 62 isoform a 
BRD3                  0.009   bromodomain containing protein 3 
KDM4A                 0.008   jumonji domain containing 2A 
GOLGB1                0.008   golgi autoantigen, golgin subfamily b, macrogolgin ...
BTBD8                 0.007   BTB (POZ) domain containing 8 
ARHGAP24              0.007   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.007   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.007   Rho GTPase activating protein 24 isoform 1 
BRD4                  0.007   bromodomain-containing protein 4 isoform short 
BRD4                  0.007   bromodomain-containing protein 4 isoform long 
BRD2                  0.007   bromodomain containing 2 
BRD2                  0.007   bromodomain containing 2 
DMP1                  0.007   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.007   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
RUFY3                 0.007   RUN and FYVE domain containing 3 isoform 1 
MAN2A1                0.007   mannosidase, alpha, class 2A, member 1 
LOC100292583          0.007   PREDICTED: hypothetical protein 
LOC100290672          0.007   PREDICTED: hypothetical protein XP_002347118 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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