Guide to the Human Genome
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Name: GLTP Sequence: fasta or formatted (209aa) NCBI GI: 7705987
Description:

glycolipid transfer protein

Referenced in:

Additional Membrane Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         20           2
 C cysteine            1.4          3           1
 D aspartate           3.8          8           1
 E glutamate           7.7         16           3
 F phenylalanine       4.8         10           2
 G glycine             4.3          9           1
 H histidine           1.9          4           1
 I isoleucine          6.7         14           1
 K lysine              8.6         18           2
 L leucine            11.5         24           2
 M methionine          2.9          6           1
 N asparagine          4.8         10           1
 P proline             5.3         11           2
 Q glutamine           3.8          8           1
 R arginine            2.9          6           1
 S serine              2.9          6           1
 T threonine           5.3         11           1
 V valine              5.7         12           1
 W tryptophan          1.4          3           1
 Y tyrosine            4.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycolipid transfer protein 
PLEKHA9               0.198   pleckstrin homology domain containing, family A (phos...
PLEKHA8               0.135   pleckstrin homology domain containing, family A (pho...
GLTPD1                0.043   glycolipid transfer protein domain containing 1 [Hom...
GLTPD2                0.030   glycolipid transfer protein domain containing 2 [Hom...
ADFP                  0.010   adipose differentiation-related protein 
LOC730429             0.010   PREDICTED: similar to ubiquitin protein ligase E3 c...
LOC730429             0.010   PREDICTED: similar to ubiquitin protein ligase E3 c...
SOS2                  0.008   son of sevenless homolog 2 
UBR5                  0.008   ubiquitin protein ligase E3 component n-recognin 5 [...
GJA9                  0.008   gap junction protein, alpha 9, 59kDa 
ABL1                  0.008   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.008   c-abl oncogene 1, receptor tyrosine kinase isoform b...
RAG1                  0.005   recombination activating gene 1 
ABL2                  0.005   arg tyrosine kinase isoform c 
ABL2                  0.005   arg tyrosine kinase isoform b 
ABL2                  0.005   arg tyrosine kinase isoform e 
ABL2                  0.005   arg tyrosine kinase isoform d 
ABL2                  0.005   arg tyrosine kinase isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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