Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 7705353
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7705353 three prime repair exonuclease 1 isoform a [Homo
sapiens]
(369 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7705353 three prime repair exonuclease 1 isoform a [Homo sapi... 755 0.0
gi|18375535 three prime repair exonuclease 1 isoform b [Homo sap... 635 0.0
gi|63079718 three prime repair exonuclease 2 [Homo sapiens] 177 2e-44
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 7e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 42 7e-04
gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens] 42 9e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 0.001
gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming... 41 0.001
gi|11386183 WAS protein family, member 2 [Homo sapiens] 40 0.003
gi|116284392 mucin 2 precursor [Homo sapiens] 39 0.010
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 38 0.017
gi|60460889 Myb protein P42POP [Homo sapiens] 38 0.017
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 38 0.017
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 38 0.017
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 37 0.022
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 37 0.022
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 37 0.022
gi|47132519 Ras association and pleckstrin homology domains 1 is... 37 0.022
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 37 0.028
gi|193804858 hypothetical protein LOC100128124 [Homo sapiens] 37 0.028
gi|157168329 formin 1 [Homo sapiens] 36 0.048
gi|46488919 astrotactin 2 isoform c [Homo sapiens] 36 0.048
gi|46488917 astrotactin 2 isoform b [Homo sapiens] 36 0.048
gi|46488915 astrotactin 2 isoform a [Homo sapiens] 36 0.048
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 36 0.048
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 36 0.048
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 36 0.048
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 36 0.063
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 36 0.063
gi|210032580 SET domain containing 1B [Homo sapiens] 36 0.063
>gi|7705353 three prime repair exonuclease 1 isoform a [Homo
sapiens]
Length = 369
Score = 755 bits (1949), Expect = 0.0
Identities = 369/369 (100%), Positives = 369/369 (100%)
Query: 1 MGPGARRQGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQA 60
MGPGARRQGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQA
Sbjct: 1 MGPGARRQGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQA 60
Query: 61 LPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVD 120
LPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVD
Sbjct: 61 LPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVD 120
Query: 121 KLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHN 180
KLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHN
Sbjct: 121 KLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHN 180
Query: 181 GDRYDFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLGSIYTR 240
GDRYDFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLGSIYTR
Sbjct: 181 GDRYDFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLGSIYTR 240
Query: 241 LYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASARTKPRP 300
LYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASARTKPRP
Sbjct: 241 LYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASARTKPRP 300
Query: 301 SAVTTTAHLATTRNTSPSLGESRGTKDLPPVKDPGALSREGLLAPLGLLAILTLAVATLY 360
SAVTTTAHLATTRNTSPSLGESRGTKDLPPVKDPGALSREGLLAPLGLLAILTLAVATLY
Sbjct: 301 SAVTTTAHLATTRNTSPSLGESRGTKDLPPVKDPGALSREGLLAPLGLLAILTLAVATLY 360
Query: 361 GLSLATPGE 369
GLSLATPGE
Sbjct: 361 GLSLATPGE 369
>gi|18375535 three prime repair exonuclease 1 isoform b [Homo
sapiens]
Length = 314
Score = 635 bits (1638), Expect = 0.0
Identities = 314/314 (100%), Positives = 314/314 (100%)
Query: 56 MGSQALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPP 115
MGSQALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPP
Sbjct: 1 MGSQALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPP 60
Query: 116 PRVVDKLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWC 175
PRVVDKLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWC
Sbjct: 61 PRVVDKLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWC 120
Query: 176 LVAHNGDRYDFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLG 235
LVAHNGDRYDFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLG
Sbjct: 121 LVAHNGDRYDFPLLQAELAMLGLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLG 180
Query: 236 SIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASAR 295
SIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASAR
Sbjct: 181 SIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASAR 240
Query: 296 TKPRPSAVTTTAHLATTRNTSPSLGESRGTKDLPPVKDPGALSREGLLAPLGLLAILTLA 355
TKPRPSAVTTTAHLATTRNTSPSLGESRGTKDLPPVKDPGALSREGLLAPLGLLAILTLA
Sbjct: 241 TKPRPSAVTTTAHLATTRNTSPSLGESRGTKDLPPVKDPGALSREGLLAPLGLLAILTLA 300
Query: 356 VATLYGLSLATPGE 369
VATLYGLSLATPGE
Sbjct: 301 VATLYGLSLATPGE 314
>gi|63079718 three prime repair exonuclease 2 [Homo sapiens]
Length = 236
Score = 177 bits (448), Expect = 2e-44
Identities = 105/226 (46%), Positives = 135/226 (59%), Gaps = 11/226 (4%)
Query: 67 QTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCV 126
+T +F D+EATGLP +P++ EL L AVHR +LE+P + +P RV+DKL+LC+
Sbjct: 8 ETFVFLDLEATGLPSVEPEIAELSLFAVHRSSLENPEHDESGALVLP---RVLDKLTLCM 64
Query: 127 APGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWCLVAHNGDRYDF 186
P + + ASEITGLS+ LA + FD + L AFL RQ P CLVAHNG YDF
Sbjct: 65 CPERPFTAKASEITGLSSEGLARCRKAGFDGAVVRTLQAFLSRQAGPICLVAHNGFDYDF 124
Query: 187 PLLQAELAMLGLTSALDGAFCVDSITALKALERASSPSEHGP----RKSYSLGSIYTRLY 242
PLL AEL LG D C+D++ AL+ L+RA S HG R+ YSLGS++ R +
Sbjct: 125 PLLCAELRRLGARLPRD-TVCLDTLPALRGLDRAHS---HGTRARGRQGYSLGSLFHRYF 180
Query: 243 GQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMY 288
P +H+AEGDV LL I R LL W D AR + I PMY
Sbjct: 181 RAEPSAAHSAEGDVHTLLLIFLHRAAELLAWADEQARGWAHIEPMY 226
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 42.4 bits (98), Expect = 7e-04
Identities = 47/141 (33%), Positives = 56/141 (39%), Gaps = 23/141 (16%)
Query: 22 PPPTPLPPLRILTLGTHTP----TPC-----SSPGSAAGTYPTMGSQALPPGPMQTLIFF 72
PPP PPL++ P TP S P S G P S +LP P+ T
Sbjct: 502 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP--- 558
Query: 73 DMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGP--PPTVPPPPRVVD-KLSLCVAPG 129
P P V LL V SP T Q P PPT P V +L+L +APG
Sbjct: 559 -------PPQAPPVLAAPLLQVPPSPPASP-TLQAPRRPPTPGPDTSVSGPRLTLALAPG 610
Query: 130 KACSPAASEITGLSTAVLAAH 150
P+ S + LS LA H
Sbjct: 611 PPPPPSRSPSSTLSGPDLAGH 631
Score = 31.2 bits (69), Expect = 1.6
Identities = 32/124 (25%), Positives = 38/124 (30%), Gaps = 23/124 (18%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQAL-----------PPGPMQTLI 70
PPP P L + L P S P S T AL PP P
Sbjct: 392 PPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP----- 446
Query: 71 FFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGK 130
PFS P + A ++PP+ PP VPP P +S P
Sbjct: 447 -----PVQAPFSPPASPPVSPSATPPS--QAPPSLAAPPLQVPPSPPASPPMSPSATPPP 499
Query: 131 ACSP 134
P
Sbjct: 500 QAPP 503
Score = 30.8 bits (68), Expect = 2.0
Identities = 84/336 (25%), Positives = 107/336 (31%), Gaps = 85/336 (25%)
Query: 20 FCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGL 79
F PPP+P P++ +P P S P S + T P+ +L P+Q +
Sbjct: 440 FSPPPSP--PVQ----APFSP-PASPPVSPSATPPSQAPPSLAAPPLQ-----------V 481
Query: 80 PFSQPKVTELCLLAVHRCALESPPTS-QGPPPTVPPPPRVVDKLSLCVAPGKACSPAAS- 137
P S P SPP S PP PPP L L P +A A+
Sbjct: 482 PPSPPA---------------SPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATP 526
Query: 138 EITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQ-PWCLVAHNGDRYDFPLLQAELAML 196
+ L + + G+ F + + + PQ P L A PLLQ
Sbjct: 527 PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA--------PLLQVP---- 574
Query: 197 GLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLGSIYTRLYGQSPP------DSH 250
S A L+ P GP S S G T PP S
Sbjct: 575 ------------PSPPASPTLQAPRRPPTPGPDTSVS-GPRLTLALAPGPPPPPSRSPSS 621
Query: 251 TAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASARTKPRPSAVTTTAH-L 309
T G LA S LR D+ G A P P A H
Sbjct: 622 TLSGPDLAGHSSSATSTPEELRGYDS------------GPEGGAAASPPPDAELAACHPA 669
Query: 310 ATTRNTSPSL---GESRGTKDLPPVKDPGALSREGL 342
A +R +P L G PP PG S +GL
Sbjct: 670 AWSRGPAPPLAFRGAPGAPLPWPPATGPG--SADGL 703
Score = 30.4 bits (67), Expect = 2.6
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 20/107 (18%)
Query: 23 PPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGS--QALPPGPMQTLIFFDMEATGLP 80
PP+P P + TL + TP S ++ G+ PT+ + LP P+ L AT P
Sbjct: 342 PPSPSAPPSLQTLPSPPATPPSQATTSLGS-PTLQATHSFLPSPPLSPL------ATPPP 394
Query: 81 FSQPKVTELCLLAVHRCALESPPTSQGPPPTVP---PPPRVVDKLSL 124
+ P A+ L++PP+ PP P P P+ + L++
Sbjct: 395 QAPP--------ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 433
Score = 28.9 bits (63), Expect = 7.7
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 20/124 (16%)
Query: 22 PPPTPLPP-LRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLP 80
PP P P LT TP P + P +A P++ Q LP P AT
Sbjct: 318 PPTLPATPHSSSLTCQLATPLPLAPPSPSAP--PSL--QTLPSPP----------ATPPS 363
Query: 81 FSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAASEIT 140
+ + L A H L SPP S P PPP+ L+L PA+ ++
Sbjct: 364 QATTSLGSPTLQATHSF-LPSPPLS----PLATPPPQAPPALALPPLQAPPSPPASPPLS 418
Query: 141 GLST 144
L+T
Sbjct: 419 PLAT 422
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.4 bits (98), Expect = 7e-04
Identities = 47/141 (33%), Positives = 56/141 (39%), Gaps = 23/141 (16%)
Query: 22 PPPTPLPPLRILTLGTHTP----TPC-----SSPGSAAGTYPTMGSQALPPGPMQTLIFF 72
PPP PPL++ P TP S P S G P S +LP P+ T
Sbjct: 463 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP--- 519
Query: 73 DMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGP--PPTVPPPPRVVD-KLSLCVAPG 129
P P V LL V SP T Q P PPT P V +L+L +APG
Sbjct: 520 -------PPQAPPVLAAPLLQVPPSPPASP-TLQAPRRPPTPGPDTSVSGPRLTLALAPG 571
Query: 130 KACSPAASEITGLSTAVLAAH 150
P+ S + LS LA H
Sbjct: 572 PPPPPSRSPSSTLSGPDLAGH 592
Score = 31.2 bits (69), Expect = 1.6
Identities = 32/124 (25%), Positives = 38/124 (30%), Gaps = 23/124 (18%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQAL-----------PPGPMQTLI 70
PPP P L + L P S P S T AL PP P
Sbjct: 353 PPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP----- 407
Query: 71 FFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGK 130
PFS P + A ++PP+ PP VPP P +S P
Sbjct: 408 -----PVQAPFSPPASPPVSPSATPPS--QAPPSLAAPPLQVPPSPPASPPMSPSATPPP 460
Query: 131 ACSP 134
P
Sbjct: 461 QAPP 464
Score = 30.8 bits (68), Expect = 2.0
Identities = 84/336 (25%), Positives = 107/336 (31%), Gaps = 85/336 (25%)
Query: 20 FCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGL 79
F PPP+P P++ +P P S P S + T P+ +L P+Q +
Sbjct: 401 FSPPPSP--PVQ----APFSP-PASPPVSPSATPPSQAPPSLAAPPLQ-----------V 442
Query: 80 PFSQPKVTELCLLAVHRCALESPPTS-QGPPPTVPPPPRVVDKLSLCVAPGKACSPAAS- 137
P S P SPP S PP PPP L L P +A A+
Sbjct: 443 PPSPPA---------------SPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATP 487
Query: 138 EITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQ-PWCLVAHNGDRYDFPLLQAELAML 196
+ L + + G+ F + + + PQ P L A PLLQ
Sbjct: 488 PLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA--------PLLQVP---- 535
Query: 197 GLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLGSIYTRLYGQSPP------DSH 250
S A L+ P GP S S G T PP S
Sbjct: 536 ------------PSPPASPTLQAPRRPPTPGPDTSVS-GPRLTLALAPGPPPPPSRSPSS 582
Query: 251 TAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASARTKPRPSAVTTTAH-L 309
T G LA S LR D+ G A P P A H
Sbjct: 583 TLSGPDLAGHSSSATSTPEELRGYDS------------GPEGGAAASPPPDAELAACHPA 630
Query: 310 ATTRNTSPSL---GESRGTKDLPPVKDPGALSREGL 342
A +R +P L G PP PG S +GL
Sbjct: 631 AWSRGPAPPLAFRGAPGAPLPWPPATGPG--SADGL 664
Score = 30.4 bits (67), Expect = 2.6
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 20/107 (18%)
Query: 23 PPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGS--QALPPGPMQTLIFFDMEATGLP 80
PP+P P + TL + TP S ++ G+ PT+ + LP P+ L AT P
Sbjct: 303 PPSPSAPPSLQTLPSPPATPPSQATTSLGS-PTLQATHSFLPSPPLSPL------ATPPP 355
Query: 81 FSQPKVTELCLLAVHRCALESPPTSQGPPPTVP---PPPRVVDKLSL 124
+ P A+ L++PP+ PP P P P+ + L++
Sbjct: 356 QAPP--------ALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 394
Score = 28.9 bits (63), Expect = 7.7
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 23 PPTPLPPLRILT--LGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLP 80
PP PP + LG + +P ++P +A P+ P +QTL AT
Sbjct: 273 PPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSA------PPSLQTLP--SPPATPPS 324
Query: 81 FSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAASEIT 140
+ + L A H L SPP S P PPP+ L+L PA+ ++
Sbjct: 325 QATTSLGSPTLQATHSF-LPSPPLS----PLATPPPQAPPALALPPLQAPPSPPASPPLS 379
Query: 141 GLST 144
L+T
Sbjct: 380 PLAT 383
>gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens]
Length = 1543
Score = 42.0 bits (97), Expect = 9e-04
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 22/129 (17%)
Query: 4 GARRQGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPP 63
G+ GRI+Q P + PP P P+++ T+G G + ++AL P
Sbjct: 759 GSVEMGRIIQNPPPLSL--PPPPQGPMQLSTVGH---------GDRDHEHLQKSAKALRP 807
Query: 64 GPMQTLIFFDMEATGLPFSQPK---VTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVD 120
P E + FS P+ VT++ + + + PT+ PPP +PPP VD
Sbjct: 808 TPQLAA-----EGDAVVFSAPQEVQVTKINPPPPYPGTIPAAPTTAAPPPPLPPPQPPVD 862
Query: 121 KLSLCVAPG 129
+C+ G
Sbjct: 863 ---VCLKKG 868
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 41.2 bits (95), Expect = 0.001
Identities = 45/132 (34%), Positives = 54/132 (40%), Gaps = 23/132 (17%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPF 81
PP PPL+ L P+P P S G P S +LP P+ T P
Sbjct: 789 PPALATPPLQAL------PSP---PASFPGQAPFSPSASLPMSPLATP----------PP 829
Query: 82 SQPKVTELCLLAVHRCALESPPTSQGP--PPTVPPPPRVVD-KLSLCVAPGKACSPAASE 138
P V LL V SP T Q P PPT P V +L+L +APG P+ S
Sbjct: 830 QAPPVLAAPLLQVPPSPPASP-TLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 888
Query: 139 ITGLSTAVLAAH 150
+ LS LA H
Sbjct: 889 SSTLSGPDLAGH 900
Score = 33.1 bits (74), Expect = 0.41
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Query: 278 ARPFGTIRPMYGVTASARTKPRPSAVTTTAHLATTRNTSPSLGESRGTKDLPPVKDPGAL 337
A P P S +T P P A T A T+P + + +PP++ P +L
Sbjct: 338 ATPLPLAPPSPSAPPSLQTLPSPPA--TPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSL 395
Query: 338 SREGLLAPLGLLAILTLAVATLYG 361
+ L AP LA+ +L T G
Sbjct: 396 TSPSLQAPPSPLALSSLQATTSLG 419
Score = 32.3 bits (72), Expect = 0.70
Identities = 39/129 (30%), Positives = 44/129 (34%), Gaps = 16/129 (12%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPF 81
PPP PPL L P S P S + T P L P+Q P
Sbjct: 722 PPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPL 781
Query: 82 SQPKVTELCLLAVHRC-ALESPPTS---QGP----------PPTVPPP--PRVVDKLSLC 125
++P LA AL SPP S Q P P PPP P V+ L
Sbjct: 782 AKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQ 841
Query: 126 VAPGKACSP 134
V P SP
Sbjct: 842 VPPSPPASP 850
Score = 32.0 bits (71), Expect = 0.91
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 23/121 (19%)
Query: 27 LPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPFSQPKV 86
+PPL T + P +P ++ T P +L P P+QT P + P +
Sbjct: 509 MPPLE--TQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQT--------ASAPLTTPHL 558
Query: 87 -TELCLLAVHRCALESPPTS-QGPPPTVP-----PPPRVVDKLS---LCVAPGKACSPAA 136
T C C L++PP+ PPP P PPP+ L+ L P SP A
Sbjct: 559 ETPPCPAP---CPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLA 615
Query: 137 S 137
+
Sbjct: 616 T 616
Score = 31.2 bits (69), Expect = 1.6
Identities = 32/124 (25%), Positives = 38/124 (30%), Gaps = 23/124 (18%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQAL-----------PPGPMQTLI 70
PPP P L + L P S P S T AL PP P
Sbjct: 617 PPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSP----- 671
Query: 71 FFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGK 130
PFS P + A ++PP+ PP VPP P +S P
Sbjct: 672 -----PVQAPFSPPASPPVSPSATPPS--QAPPSLAAPPLQVPPSPPASPPMSPSATPPP 724
Query: 131 ACSP 134
P
Sbjct: 725 QAPP 728
Score = 30.4 bits (67), Expect = 2.6
Identities = 81/334 (24%), Positives = 102/334 (30%), Gaps = 70/334 (20%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPF 81
PP PPL++ P S P S + T P L P+Q +P
Sbjct: 696 PPSLAAPPLQV-----PPSPPASPPMSPSATPPPQAPPPLAAPPLQ-----------VPP 739
Query: 82 SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAAS--EI 139
S P + A + PP PP VPP P +S P PA + +
Sbjct: 740 SPPASPPMSPSATPPPRV--PPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPL 797
Query: 140 TGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQ-PWCLVAHNGDRYDFPLLQAELAMLGL 198
L + + G+ F + + + PQ P L A PLLQ
Sbjct: 798 QALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAA--------PLLQVP------ 843
Query: 199 TSALDGAFCVDSITALKALERASSPSEHGPRKSYSLGSIYTRLYGQSPP------DSHTA 252
S A L+ P GP S S G T PP S T
Sbjct: 844 ----------PSPPASPTLQAPRRPPTPGPDTSVS-GPRLTLALAPGPPPPPSRSPSSTL 892
Query: 253 EGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASARTKPRPSAVTTTAH-LAT 311
G LA S LR D+ G A P P A H A
Sbjct: 893 SGPDLAGHSSSATSTPEELRGYDS------------GPEGGAAASPPPDAELAACHPAAW 940
Query: 312 TRNTSPSL---GESRGTKDLPPVKDPGALSREGL 342
+R +P L G PP PG S +GL
Sbjct: 941 SRGPAPPLAFRGAPGAPLPWPPATGPG--SADGL 972
Score = 30.0 bits (66), Expect = 3.5
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 16/109 (14%)
Query: 19 CFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGS---QALPPGPMQTLIFFDME 75
C P P PP + T TP+ ++P A P + S Q LP P+ L
Sbjct: 563 CPAPCPLQAPPSPLTTPPPETPSSIATPPPQAP--PALASPPLQGLPSPPLSPL------ 614
Query: 76 ATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 124
AT P + P + L A SPP S P P P+ + L++
Sbjct: 615 ATPPPQAPPXLALPPLQAP-----PSPPASPPLSPLATPSPQAPNALAV 658
Score = 30.0 bits (66), Expect = 3.5
Identities = 33/126 (26%), Positives = 44/126 (34%), Gaps = 43/126 (34%)
Query: 21 CPPPTPL--PPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATG 78
CP P PL PP + T TP+ ++P P AL P+Q G
Sbjct: 563 CPAPCPLQAPPSPLTTPPPETPSSIATP-------PPQAPPALASPPLQ----------G 605
Query: 79 LPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAASE 138
LP SPP S P PPP+ L+L PA+
Sbjct: 606 LP--------------------SPPLS----PLATPPPQAPPXLALPPLQAPPSPPASPP 641
Query: 139 ITGLST 144
++ L+T
Sbjct: 642 LSPLAT 647
>gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming
sequence-like 1 [Homo sapiens]
Length = 491
Score = 41.2 bits (95), Expect = 0.001
Identities = 32/103 (31%), Positives = 42/103 (40%), Gaps = 21/103 (20%)
Query: 16 PEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDME 75
P+ + PPP P PP+ +H P P AAGT + SQA PP M
Sbjct: 337 PQQHYAPPPPPPPPI------SH---PMPHPPQAAGTPHLVYSQAPPP---------PMT 378
Query: 76 ATGLPFSQPK---VTELCLLAVHRCALESPPTSQGPPPTVPPP 115
+ P + P + ++ H PP GPP T PPP
Sbjct: 379 SAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPPP 421
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 40.0 bits (92), Expect = 0.003
Identities = 36/105 (34%), Positives = 40/105 (38%), Gaps = 21/105 (20%)
Query: 16 PEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDME 75
P+ F PPP P PP + +G P P GS GT P + PP P D
Sbjct: 312 PKPGFAPPPAPPPPPPPM-IGIPPPPPPVGFGSP-GTPPPPSPPSFPPHP-------DFA 362
Query: 76 ATGLPFSQPKVTELCLLAVHRCALESPPTSQ----GPPPTVPPPP 116
A P P A L PP SQ PPP PPPP
Sbjct: 363 APPPPPPPP--------AADYPTLPPPPLSQPTGGAPPPPPPPPP 399
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 38.5 bits (88), Expect = 0.010
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 25 TPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPFSQP 84
TP PP +T TP+P ++P S T T S P P T+ T P + P
Sbjct: 1688 TPSPPTTTMT----TPSPTTTPSSPITTTTTPSSTTTPSPPPTTM------TTPSPTTTP 1737
Query: 85 KVTELCLLAVHRCALESPPTSQGPPPTVPPP 115
+ + SP T+ PP++ PP
Sbjct: 1738 SPPTTTMTTLPPTTTSSPLTTTPLPPSITPP 1768
Score = 35.0 bits (79), Expect = 0.11
Identities = 33/123 (26%), Positives = 39/123 (31%), Gaps = 25/123 (20%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPF 81
PPPT P T T PT SP + P + LPP T P
Sbjct: 1596 PPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPP-------------TTTPS 1642
Query: 82 SQPKVTELCLLAVHRCALESPPTSQGPPP----TVPPPPRVVDKLSLCVAPGKACSPAAS 137
P T SPPT+ P P T PPP + P SP +
Sbjct: 1643 PPPTTT----TTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTP----SPPTT 1694
Query: 138 EIT 140
+T
Sbjct: 1695 TMT 1697
Score = 32.7 bits (73), Expect = 0.53
Identities = 29/102 (28%), Positives = 34/102 (33%), Gaps = 8/102 (7%)
Query: 23 PPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALP----PGPMQTLIFFDMEAT- 77
PPT P T T PT SP + P + LP P P T T
Sbjct: 1479 PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTT 1538
Query: 78 -GLPFSQPKVTELCLLAVHRCALESPP--TSQGPPPTVPPPP 116
P + P + SPP T+ PPPT P P
Sbjct: 1539 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSP 1580
Score = 32.3 bits (72), Expect = 0.70
Identities = 31/97 (31%), Positives = 34/97 (35%), Gaps = 28/97 (28%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPF 81
PPPT P I T T PT SP + T P + PP T P
Sbjct: 1432 PPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPP-------------TTTP- 1477
Query: 82 SQPKVTELCLLAVHRCALESPP--TSQGPPPTVPPPP 116
S P T SPP T+ PPPT P P
Sbjct: 1478 SPPTTT------------PSPPTTTTTTPPPTTTPSP 1502
Score = 31.6 bits (70), Expect = 1.2
Identities = 28/95 (29%), Positives = 32/95 (33%), Gaps = 10/95 (10%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPF 81
P TP PP T T PT SP + T P + PP T T P
Sbjct: 1402 PTTTPSPPPTSTT--TLPPTTTPSPPTTTTTTPPPTTTPSPPITTTT--------TPPPT 1451
Query: 82 SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPP 116
+ P SPPT+ PPT P P
Sbjct: 1452 TTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSP 1486
Score = 30.4 bits (67), Expect = 2.6
Identities = 30/105 (28%), Positives = 34/105 (32%), Gaps = 11/105 (10%)
Query: 22 PPPTPLPPLRILT-----LGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEA 76
PPPT P T T T P ++P T T P P T I
Sbjct: 1494 PPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTST 1553
Query: 77 TGL-PFSQPKVTELCLLAVHRCALESPPTSQGPPP-----TVPPP 115
T L P + P SPPT+ P P T PPP
Sbjct: 1554 TTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPP 1598
Score = 30.4 bits (67), Expect = 2.6
Identities = 25/97 (25%), Positives = 29/97 (29%), Gaps = 23/97 (23%)
Query: 23 PPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPFS 82
PPT P T T PT SP + P + LPP T P
Sbjct: 1518 PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPP-------------TTTPSP 1564
Query: 83 QPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVV 119
P T P T+ PP T P P +
Sbjct: 1565 PPTTT----------TTPPPTTTPSPPTTTTPSPPTI 1591
Score = 30.0 bits (66), Expect = 3.5
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 22 PPPTPLPPLRILTLGTHTPTP-----CSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEA 76
PP TP P T G HT +P S PG+ T S A P +QT
Sbjct: 4252 PPSTPTAPTT--TSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTP 4309
Query: 77 TGLPFSQPKV 86
T P S P +
Sbjct: 4310 TPTPLSTPSI 4319
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 37.7 bits (86), Expect = 0.017
Identities = 34/110 (30%), Positives = 42/110 (38%), Gaps = 18/110 (16%)
Query: 21 CPPPTPLPPLR----ILTLGTHTPTPCSSPGS--AAGTYPTMGSQ-------ALPPGPMQ 67
CP P P+PP H P P S GS +AG P+ G + PGP
Sbjct: 645 CPTPAPVPPPEAPSPFRAPPFHPPGPMPSVGSMPSAGPMPSAGPMPSAGPVPSARPGPPT 704
Query: 68 TLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPP---TSQGPPPTVPP 114
T + GL P++ L HR P S PPPT+PP
Sbjct: 705 TANHLGLSVPGLVSVPPRL--LPGPENHRAGSNEDPILAPSGTPPPTIPP 752
Score = 28.9 bits (63), Expect = 7.7
Identities = 35/123 (28%), Positives = 42/123 (34%), Gaps = 33/123 (26%)
Query: 22 PPPTPLPPLRILTLGTHTPTPC----------------SSPGSAAGTYPTMGSQALPPGP 65
PPPT +PP T G P P S + G LPP P
Sbjct: 746 PPPT-IPPDE--TFGGRVPRPAFVHYDKEEASDVEISLESDSDDSVVIVPEGLPPLPPPP 802
Query: 66 MQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESP---PTSQGP-PPTVPPPPRVVDK 121
+ TG P + P V A E P P + GP PP PPPP V
Sbjct: 803 PSGATPPPIAPTGPPTASPPVP----------AKEEPEELPAAPGPLPPPPPPPPPVPGP 852
Query: 122 LSL 124
++L
Sbjct: 853 VTL 855
>gi|60460889 Myb protein P42POP [Homo sapiens]
Length = 399
Score = 37.7 bits (86), Expect = 0.017
Identities = 45/165 (27%), Positives = 60/165 (36%), Gaps = 34/165 (20%)
Query: 15 RPEMCFCPPPTPLPPLRILTLGTHTPTPCSS---PGSAAGTYPTMGSQALPPGPMQTLIF 71
RP+ PPP+ L P+++ L P P P A P+ S PP P TL
Sbjct: 196 RPKERESPPPSALQPVQLPRLALSPPPPAPPLPPPPPLAQVAPSPPSPPPPPRPPPTLSA 255
Query: 72 FDMEATGLPFSQPKVTELCLLA--------------------VHRCALESPPTSQGPPPT 111
D L Q + LA + ++S P PPP
Sbjct: 256 SDPSLDFLRAQQETANAIRELAGTLRQGLAKLSEALSALLPLLPGTPVDSLPPPLPPPPP 315
Query: 112 VPPPPRVV-----DKLSLCVAPGKACSPAASEITGLSTAVLAAHG 151
PPPPR V K+ + P S A+ + G AV+AA G
Sbjct: 316 PPPPPRPVLPPPAPKVEITPEP---VSVVAAVVDG---AVVAARG 354
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 37.7 bits (86), Expect = 0.017
Identities = 45/144 (31%), Positives = 55/144 (38%), Gaps = 21/144 (14%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQAL----PPGPMQTLIFFDMEAT 77
PPP P PPL + P P P P++G++AL PP P+ L A
Sbjct: 421 PPPPPPPPLLPGSSAEPPPPPPPPP------LPSVGAKALPTAPPPPPLPGLGAMAPPAP 474
Query: 78 GLPFSQPKVTELC-----LLAVHRCALESPP----TSQGPPPTVPPPPRVVDKLSLCVAP 128
LP P E L C PP GPPP PPPP + S VA
Sbjct: 475 PLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPP--PPPPLLPCTCSPPVAG 532
Query: 129 GKACSPAASEITGLSTAVLAAHGR 152
G A GL +A + +H R
Sbjct: 533 GMEEVIVAQVDHGLGSAWVPSHRR 556
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 37.7 bits (86), Expect = 0.017
Identities = 45/144 (31%), Positives = 55/144 (38%), Gaps = 21/144 (14%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQAL----PPGPMQTLIFFDMEAT 77
PPP P PPL + P P P P++G++AL PP P+ L A
Sbjct: 421 PPPPPPPPLLPGSSAEPPPPPPPPP------LPSVGAKALPTAPPPPPLPGLGAMAPPAP 474
Query: 78 GLPFSQPKVTELC-----LLAVHRCALESPP----TSQGPPPTVPPPPRVVDKLSLCVAP 128
LP P E L C PP GPPP PPPP + S VA
Sbjct: 475 PLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPP--PPPPLLPCTCSPPVAG 532
Query: 129 GKACSPAASEITGLSTAVLAAHGR 152
G A GL +A + +H R
Sbjct: 533 GMEEVIVAQVDHGLGSAWVPSHRR 556
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 37.4 bits (85), Expect = 0.022
Identities = 35/122 (28%), Positives = 44/122 (36%), Gaps = 16/122 (13%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAG--TYPTMGSQALPPGPMQTLIFFDMEATGL 79
P P P P L LG +P + GS++G + P + LP P T A G
Sbjct: 280 PSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHRTLPAPPAPTA----WPAAGA 335
Query: 80 PFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAASEI 139
P P E + P +QGPP P RVV C G P+ E
Sbjct: 336 P-GAPNPAE---------SRRGPGPAQGPPSRRDEPRRVVIAARECGREGSELPPSGEET 385
Query: 140 TG 141
G
Sbjct: 386 PG 387
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 37.4 bits (85), Expect = 0.022
Identities = 35/122 (28%), Positives = 44/122 (36%), Gaps = 16/122 (13%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAG--TYPTMGSQALPPGPMQTLIFFDMEATGL 79
P P P P L LG +P + GS++G + P + LP P T A G
Sbjct: 280 PSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHRTLPAPPAPTA----WPAAGA 335
Query: 80 PFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAASEI 139
P P E + P +QGPP P RVV C G P+ E
Sbjct: 336 P-GAPNPAE---------SRRGPGPAQGPPSRRDEPRRVVIAARECGREGSELPPSGEET 385
Query: 140 TG 141
G
Sbjct: 386 PG 387
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 37.4 bits (85), Expect = 0.022
Identities = 35/122 (28%), Positives = 44/122 (36%), Gaps = 16/122 (13%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAG--TYPTMGSQALPPGPMQTLIFFDMEATGL 79
P P P P L LG +P + GS++G + P + LP P T A G
Sbjct: 280 PSPRPAPACGELRLGRLSPPRADTGGSSSGGCSGPDSKHRTLPAPPAPTA----WPAAGA 335
Query: 80 PFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAASEI 139
P P E + P +QGPP P RVV C G P+ E
Sbjct: 336 P-GAPNPAE---------SRRGPGPAQGPPSRRDEPRRVVIAARECGREGSELPPSGEET 385
Query: 140 TG 141
G
Sbjct: 386 PG 387
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 37.4 bits (85), Expect = 0.022
Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 12/125 (9%)
Query: 19 CFCPPPTPLPPLR--ILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEA 76
C PPP+PL P+ + + + P P + P + + + P P +
Sbjct: 847 CAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQP 906
Query: 77 TGLPFSQPKVT----ELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKAC 132
+ +P P E L+ PP S P P PPPP +PGK
Sbjct: 907 SSIPVPSPDFPPPPPESSLV------FPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKT 960
Query: 133 SPAAS 137
S +S
Sbjct: 961 SKTSS 965
Score = 37.4 bits (85), Expect = 0.022
Identities = 26/96 (27%), Positives = 31/96 (32%), Gaps = 1/96 (1%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPF 81
P P P PP + TP SPG + G + PP P + P
Sbjct: 932 PSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPE 991
Query: 82 -SQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPP 116
+P V L SP PPP PP P
Sbjct: 992 PKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKP 1027
Score = 31.2 bits (69), Expect = 1.6
Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 14/121 (11%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFD--MEATGL 79
PPP P PP P P P + + P+ GS A T+ + +G
Sbjct: 633 PPPPPPPP----------PPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGA 682
Query: 80 PFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAASEI 139
F P + +V L PP PPP PPPP + P C+P+ +
Sbjct: 683 LFKPPTPPVMQSQSVKPQILV-PPNGVVPPPPPPPPPPTPGSAMAQLKPA-PCAPSLPQF 740
Query: 140 T 140
+
Sbjct: 741 S 741
Score = 30.0 bits (66), Expect = 3.5
Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 33/120 (27%)
Query: 22 PPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPF 81
PPP P PP + P PC+ P++ + PP P++
Sbjct: 712 PPPPPPPPTPGSAMAQLKPAPCA---------PSLPQFSAPPPPLK-------------- 748
Query: 82 SQPKVTELCLLAVHRCALESPPTSQGPPP-TVPPPPRVVDKLSLCVAPGKACSPAASEIT 140
+ V +PPT PPP P PP+ K + + + A +T
Sbjct: 749 ---------IHQVQHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVT 799
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 37.0 bits (84), Expect = 0.028
Identities = 35/112 (31%), Positives = 39/112 (34%), Gaps = 31/112 (27%)
Query: 5 ARRQGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPG 64
A R RP + PPPTP PP P P P S+ P + PPG
Sbjct: 158 AHGAARTAPPRPNVPAPPPPTPPPP--------PPPLPPPLPSSSPIKTPLVS----PPG 205
Query: 65 PMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPP 116
P + LP P V CA PP PPPT PP P
Sbjct: 206 P--------LTKGNLPVVAPPVP---------CA--PPPPPPPPPPTPPPLP 238
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/135 (27%), Positives = 45/135 (33%), Gaps = 31/135 (22%)
Query: 3 PGARRQGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALP 62
PG +G + P + PPP P PP T P P +S S P + LP
Sbjct: 204 PGPLTKGNLPVVAPPVPCAPPPPPPPP-----PPTPPPLPPASVLSDKAVKPQLAPLHLP 258
Query: 63 PGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKL 122
P P LP P C + SP PP PPP
Sbjct: 259 PIP-----------PPLPLLPP-----CGYPGLKAEPASPAQDAQEPPAPPPP------- 295
Query: 123 SLCVAPGKACSPAAS 137
+ P +CSP AS
Sbjct: 296 ---LPPYASCSPRAS 307
>gi|193804858 hypothetical protein LOC100128124 [Homo sapiens]
Length = 171
Score = 37.0 bits (84), Expect = 0.028
Identities = 39/151 (25%), Positives = 58/151 (38%), Gaps = 7/151 (4%)
Query: 34 TLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLA 93
T G TPT SS +A G PT+ S G M +F G ++
Sbjct: 12 TAGGMTPTASSSQHTAGGMTPTVFSSQHTAGGMTPTVFSSQHTAGGMTPTASSSQHTAGG 71
Query: 94 VHRCALESPPTSQGPPPTVPPPPRVVDKLSLCV------APGKACSPAASEIT-GLSTAV 146
+ SP T+ G PTV P ++ V A G + ++S+ T G+ T
Sbjct: 72 MTPTVFSSPHTAGGMTPTVFSSPHTAGGMTPTVFSSPHTAGGMTPTASSSQHTAGVMTPT 131
Query: 147 LAAHGRQCFDDNLANLLLAFLRRQPQPWCLV 177
++ C ++ LLL R P CL+
Sbjct: 132 ASSFPTHCRGNDPHCLLLPQHCRGNDPHCLL 162
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 36.2 bits (82), Expect = 0.048
Identities = 30/101 (29%), Positives = 33/101 (32%), Gaps = 41/101 (40%)
Query: 16 PEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDME 75
P PPP PLP LG+ +P P P SA P PP P L
Sbjct: 647 PPPASIPPPPPLPS----GLGSLSPAPPMPPVSAGPPLPP------PPPPPPPL------ 690
Query: 76 ATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPP 116
PP+S GPPP PPPP
Sbjct: 691 -------------------------PPPSSAGPPPPPPPPP 706
>gi|46488919 astrotactin 2 isoform c [Homo sapiens]
Length = 1339
Score = 36.2 bits (82), Expect = 0.048
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 2 GPGARRQGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGT 52
GPG+ ++GRP +CF P P PL PL +L L P P + +AA +
Sbjct: 11 GPGSG-----LRGRPRLCFHPGPPPLLPLLLLFLLLLPPPPLLAGATAAAS 56
>gi|46488917 astrotactin 2 isoform b [Homo sapiens]
Length = 1335
Score = 36.2 bits (82), Expect = 0.048
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 2 GPGARRQGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGT 52
GPG+ ++GRP +CF P P PL PL +L L P P + +AA +
Sbjct: 11 GPGSG-----LRGRPRLCFHPGPPPLLPLLLLFLLLLPPPPLLAGATAAAS 56
>gi|46488915 astrotactin 2 isoform a [Homo sapiens]
Length = 1288
Score = 36.2 bits (82), Expect = 0.048
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 2 GPGARRQGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGT 52
GPG+ ++GRP +CF P P PL PL +L L P P + +AA +
Sbjct: 11 GPGSG-----LRGRPRLCFHPGPPPLLPLLLLFLLLLPPPPLLAGATAAAS 56
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 36.2 bits (82), Expect = 0.048
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 14/88 (15%)
Query: 44 SSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRC--ALES 101
+ P Y + QA PP P++ +F + G P S + E+ C L++
Sbjct: 661 AGPSQGQTNYAFVPEQARPPPPLEDNLFLPPQGGGKPPSSAQTAEIFQALQQECMRQLQA 720
Query: 102 PPTSQGP------------PPTVPPPPR 117
P S P PP VP PPR
Sbjct: 721 PAGSPAPSPSPGGDDKPQVPPRVPIPPR 748
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 36.2 bits (82), Expect = 0.048
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 14/88 (15%)
Query: 44 SSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRC--ALES 101
+ P Y + QA PP P++ +F + G P S + E+ C L++
Sbjct: 739 AGPSQGQTNYAFVPEQARPPPPLEDNLFLPPQGGGKPPSSAQTAEIFQALQQECMRQLQA 798
Query: 102 PPTSQGP------------PPTVPPPPR 117
P S P PP VP PPR
Sbjct: 799 PAGSPAPSPSPGGDDKPQVPPRVPIPPR 826
Score = 29.6 bits (65), Expect = 4.5
Identities = 35/117 (29%), Positives = 44/117 (37%), Gaps = 26/117 (22%)
Query: 22 PPPTPLPPLRILTLGTHTPT-----PCSS---------PGSAAGTYPTMGSQALP----- 62
PPP P P T+ P P SS PG G + S +P
Sbjct: 580 PPPRPPQPAFFTQKPTYDPVSEDQDPLSSDFKRLGLRKPGLPRGLWLAKPSARVPGTKAS 639
Query: 63 --PGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCAL--ESPPTSQGPPPTVPPP 115
G TLI F E +P +P L LA+ C+L E+PP Q P +P P
Sbjct: 640 RGSGAEVTLIDFGEEPV-VPALRPCAPSLAQLAMDACSLLDETPP--QSPTRALPRP 693
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 36.2 bits (82), Expect = 0.048
Identities = 36/119 (30%), Positives = 47/119 (39%), Gaps = 18/119 (15%)
Query: 20 FCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGL 79
F PP P P +P P S P S P + + A+ PGP+ T D
Sbjct: 658 FVIPPHPKVP------APFSPPP-SKPRSPNPAAPALAAPAVVPGPVSTT---DASPQSP 707
Query: 80 PFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSLCVAPGKACSPAASE 138
P Q +T L V PP+ PPP+ PPP K + V +P+ASE
Sbjct: 708 PTPQTTLTPLQESPVISKDQSPPPS---PPPSYHPPPPPTKKPEVVVE-----APSASE 758
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 35.8 bits (81), Expect = 0.063
Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 23 PPTPLPPLRILT----LGTHTPTPCSSPGSA---AGTYPTMGSQ------ALPPGPMQTL 69
PP P PP +L + T +P P + PG A G P + PPGP+ L
Sbjct: 482 PPPPPPPPTLLNSSHPVPTQSPLPFTQPGPAFNQQGQQPVFPRERPVRPALQPPGPVGIL 541
Query: 70 IFFDM-EATGLPFSQPKVTELCLLAVHRCALESPPTSQGP-PPTVPPP 115
F AT PF P+ L + P QGP P +PPP
Sbjct: 542 HFSQPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQGPLHPPLPPP 589
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 35.8 bits (81), Expect = 0.063
Identities = 36/116 (31%), Positives = 39/116 (33%), Gaps = 36/116 (31%)
Query: 3 PGARRQGRIVQGRPEMCFCPPPT--PLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQA 60
PGA + +QG P M PP PLPP G P P PGSA Y
Sbjct: 555 PGAPQ----MQGNPTMVPLPPGVQPPLPP------GAPPPPPPPPPGSAGMMY---APPP 601
Query: 61 LPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPP 116
PP PM F M G+ P G PP PPPP
Sbjct: 602 PPPPPMDPSNFVTMMGMGVAGMPPF---------------------GMPPAPPPPP 636
Score = 31.6 bits (70), Expect = 1.2
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 23 PPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGSQALPPGPMQTLIFFDMEATGLPFS 82
PP P PP ++ + TP P + T + G+ ++PP Q + G P
Sbjct: 507 PPPPPPPSS--SMASSTPLPWQQ--NTTTTTTSAGTGSIPPWQQQQAAA--AASPGAPQM 560
Query: 83 QPKVTELCLLAVHRCALESPPTSQGPPPTVPPPP 116
Q T + L + PP G PP PPPP
Sbjct: 561 QGNPTMVPLPPGVQ-----PPLPPGAPPPPPPPP 589
Score = 31.2 bits (69), Expect = 1.6
Identities = 41/150 (27%), Positives = 47/150 (31%), Gaps = 26/150 (17%)
Query: 1 MGPGARR--QGRIVQGRPEMCFCPPPTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTMGS 58
+G G R QG+ + P M PPP P P G P P +G P
Sbjct: 456 VGSGVYRLHQGKGMMPPPPMGMMPPPPPPPS------GQPPPPP-------SGPLPPWQQ 502
Query: 59 QALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAV---------HRCALESP--PTSQG 107
Q P P +T LP+ Q T A SP P QG
Sbjct: 503 QQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAPQMQG 562
Query: 108 PPPTVPPPPRVVDKLSLCVAPGKACSPAAS 137
P VP PP V L P P S
Sbjct: 563 NPTMVPLPPGVQPPLPPGAPPPPPPPPPGS 592
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 35.8 bits (81), Expect = 0.063
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 7/108 (6%)
Query: 24 PTPLPPLRILTLGTHTPTPCSSPGSAAGTYPTM----GSQALPPGPM---QTLIFFDMEA 76
PTPLPPL L + P PG + P+M G PP + L+ +
Sbjct: 1454 PTPLPPLLPAPLASCPPPMKRKPGRPRRSPPSMLSLDGPLVRPPAGAALGRELLLLPGQP 1513
Query: 77 TGLPFSQPKVTELCLLAVHRCALESPPTSQGPPPTVPPPPRVVDKLSL 124
F L + +PP P P PPPP V+ L
Sbjct: 1514 QTPVFPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEPTKL 1561
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,120,436
Number of Sequences: 37866
Number of extensions: 1116162
Number of successful extensions: 9681
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 292
Number of HSP's that attempted gapping in prelim test: 7728
Number of HSP's gapped (non-prelim): 1780
length of query: 369
length of database: 18,247,518
effective HSP length: 104
effective length of query: 265
effective length of database: 14,309,454
effective search space: 3792005310
effective search space used: 3792005310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.