TREX1 9840

Name: TREX1	Sequence: fasta or formatted (314aa)		NCBI GI: 18375535
Description: three prime repair exonuclease 1 isoform b		Referenced in: DNases, Recombination, and DNA Repair RNases and RNA Stability
Other entries for this name: alt prot [369aa] three prime repair exonuclease 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.8 37 2 C cysteine 2.5 8 1 D aspartate 4.1 13 2 E glutamate 3.5 11 1 F phenylalanine 2.5 8 2 G glycine 7.3 23 1 H histidine 2.2 7 1 I isoleucine 2.2 7 1 K lysine 2.5 8 1 L leucine 14.6 46 3 M methionine 1.6 5 1 N asparagine 1.3 4 1 P proline 10.8 34 4 Q glutamine 3.5 11 1 R arginine 5.7 18 2 S serine 8.3 26 2 T threonine 7.6 24 3 V valine 4.8 15 2 W tryptophan 1.0 3 1 Y tyrosine 1.9 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 three prime repair exonuclease 1 isoform b TREX1 1.000 three prime repair exonuclease 1 isoform a TREX2 0.249 three prime repair exonuclease 2 GJC2 0.016 gap junction protein, gamma 2, 47kDa MLLT1 0.016 myeloid/lymphoid or mixed-lineage leukemia (trithora... ZNF827 0.016 zinc finger protein 827 DIDO1 0.015 death inducer-obliterator 1 isoform c FLJ22184 0.013 PREDICTED: hypothetical protein FLJ22184 TNK2 0.013 tyrosine kinase, non-receptor, 2 isoform 1 TNK2 0.013 tyrosine kinase, non-receptor, 2 isoform 2 FIP1L1 0.013 FIP1 like 1 isoform 3 FIP1L1 0.013 FIP1 like 1 isoform 1 FBXL16 0.013 F-box and leucine-rich repeat protein 16 PRIMA1 0.013 proline rich membrane anchor 1 precursor POLE 0.013 DNA-directed DNA polymerase epsilon LILRB3 0.013 leukocyte immunoglobulin-like receptor, subfamily B... LILRB3 0.013 leukocyte immunoglobulin-like receptor, subfamily B... C4orf48 0.011 hypothetical protein LOC401115 TNKS 0.011 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... FIP1L1 0.011 FIP1 like 1 isoform 2 DISP2 0.011 dispatched B FAM75C1 0.011 family with sequence similarity 75, member C1 [Homo... FMN1 0.011 formin 1 PITX3 0.011 paired-like homeodomain 3 RANBP9 0.011 RAN binding protein 9 LOC100288243 0.011 PREDICTED: hypothetical protein LOC100288243 0.011 PREDICTED: hypothetical protein XP_002342233 JMY 0.011 junction-mediating and regulatory protein SETBP1 0.011 SET binding protein 1 isoform a CRKRS 0.011 Cdc2-related kinase, arginine/serine-rich isoform 2... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.