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Search of human proteins with 13994289
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13994289 fibronectin type III and SPRY domain containing
1-like isoform 2 [Homo sapiens]
(145 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13994289 fibronectin type III and SPRY domain containing 1-li... 288 1e-78
gi|89886468 fibronectin type III and SPRY domain containing 1-li... 224 3e-59
gi|223718222 fibronectin type III and SPRY domain containing 1-l... 216 4e-57
gi|13236585 fibronectin type III and SPRY domain containing 1 [H... 112 8e-26
gi|19924163 muscle specific ring finger protein 1 [Homo sapiens] 75 1e-14
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens] 65 3e-11
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 65 3e-11
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens] 65 3e-11
gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens] 58 3e-09
gi|148833499 midline 1 [Homo sapiens] 55 2e-08
gi|4557753 midline 1 [Homo sapiens] 55 2e-08
gi|15451852 midline 1 [Homo sapiens] 55 2e-08
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens] 55 2e-08
gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens] 48 3e-06
gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens] 48 3e-06
gi|134288906 tripartite motif-containing 67 [Homo sapiens] 46 1e-05
gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens] 44 4e-05
gi|55741632 fibronectin type III and SPRY domain containing 2 [H... 41 4e-04
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 40 7e-04
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 40 7e-04
gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sa... 39 0.001
gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sap... 39 0.001
gi|55770834 centromere protein F [Homo sapiens] 38 0.003
gi|34577114 cytomatrix protein p110 [Homo sapiens] 37 0.004
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 37 0.006
gi|157743261 tripartite motif-containing 75 [Homo sapiens] 36 0.010
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 35 0.017
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 35 0.022
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 35 0.022
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 35 0.022
>gi|13994289 fibronectin type III and SPRY domain containing 1-like
isoform 2 [Homo sapiens]
Length = 145
Score = 288 bits (736), Expect = 1e-78
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE
Sbjct: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
Query: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKNC 120
VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKNC
Sbjct: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKNC 120
Query: 121 INTLNKGSCIFKKAFLFFFSFGFLY 145
INTLNKGSCIFKKAFLFFFSFGFLY
Sbjct: 121 INTLNKGSCIFKKAFLFFFSFGFLY 145
>gi|89886468 fibronectin type III and SPRY domain containing 1-like
isoform 1 [Homo sapiens]
Length = 498
Score = 224 bits (570), Expect = 3e-59
Identities = 115/115 (100%), Positives = 115/115 (100%)
Query: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE
Sbjct: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
Query: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSK 115
VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSK
Sbjct: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSK 115
>gi|223718222 fibronectin type III and SPRY domain containing 1-like
isoform 3 [Homo sapiens]
Length = 530
Score = 216 bits (551), Expect = 4e-57
Identities = 111/112 (99%), Positives = 112/112 (100%)
Query: 4 QKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKE 63
Q+EALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKE
Sbjct: 36 QQEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKE 95
Query: 64 SMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSK 115
SMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSK
Sbjct: 96 SMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSK 147
>gi|13236585 fibronectin type III and SPRY domain containing 1 [Homo
sapiens]
Length = 496
Score = 112 bits (281), Expect = 8e-26
Identities = 56/118 (47%), Positives = 86/118 (72%)
Query: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
M+ Q+EAL++II TLA KN+EIQ+FI +L L V+ NS+ + +L+ EF SL+S+L+E
Sbjct: 1 MEEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEE 60
Query: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHK 118
+KE M+ IKQ++A ++ ELQ+Q++ C ALE+SEELLE A ++L + E+F + K
Sbjct: 61 LKEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAK 118
>gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]
Length = 353
Score = 75.5 bits (184), Expect = 1e-14
Identities = 44/125 (35%), Positives = 66/125 (52%)
Query: 4 QKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKE 63
QK L IS L ND +Q I L + + +ENS + EL ++FD+LY+ILDE K
Sbjct: 166 QKTELNNCISMLVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKS 225
Query: 64 SMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKNCINT 123
++ I QEQ +K +++ I Q L+ S +L+E A +SLD F K I +
Sbjct: 226 ELLQRITQEQEKKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKS 285
Query: 124 LNKGS 128
+ + S
Sbjct: 286 IVEAS 290
>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]
Length = 452
Score = 64.7 bits (156), Expect = 3e-11
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 4 QKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKE 63
QK L I+ L ND +Q I L T K ++E EL E+FD LY IL+E K
Sbjct: 168 QKSELSDGIAILVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKN 227
Query: 64 SMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKNCINT 123
M I + Q K + +++ I + ++ LEN +L+E + +D E F + K +
Sbjct: 228 EMTQVITRTQEEKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKK 287
Query: 124 LNKGSCIFK 132
+++ S F+
Sbjct: 288 ISEASKAFQ 296
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
Length = 548
Score = 64.7 bits (156), Expect = 3e-11
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 4 QKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKE 63
QK L I+ L ND +Q I L T K ++E EL E+FD LY IL+E K
Sbjct: 168 QKSELSDGIAILVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKN 227
Query: 64 SMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKNCINT 123
M I + Q K + +++ I + ++ LEN +L+E + +D E F + K +
Sbjct: 228 EMTQVITRTQEEKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKK 287
Query: 124 LNKGSCIFK 132
+++ S F+
Sbjct: 288 ISEASKAFQ 296
>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
Length = 540
Score = 64.7 bits (156), Expect = 3e-11
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 4 QKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKE 63
QK L I+ L ND +Q I L T K ++E EL E+FD LY IL+E K
Sbjct: 168 QKSELSDGIAILVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKN 227
Query: 64 SMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKNCINT 123
M I + Q K + +++ I + ++ LEN +L+E + +D E F + K +
Sbjct: 228 EMTQVITRTQEEKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKK 287
Query: 124 LNKGSCIFK 132
+++ S F+
Sbjct: 288 ISEASKAFQ 296
>gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
Length = 358
Score = 57.8 bits (138), Expect = 3e-09
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 4 QKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKE 63
QK L I+ L ND +Q I + + +++NS L++ F+SL ++L+E K
Sbjct: 170 QKSELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKG 229
Query: 64 SMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKNCIN 122
++ + +EQ K Q ++ I Q + LE S +L+E A +S++ + + + K IN
Sbjct: 230 ELLQALAREQEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELIN 288
>gi|148833499 midline 1 [Homo sapiens]
Length = 667
Score = 55.5 bits (132), Expect = 2e-08
Identities = 32/118 (27%), Positives = 60/118 (50%)
Query: 2 DSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEV 61
D K+ L+ ++ L +N E++ + L T + V+ N+S ++L EE D L I+ +
Sbjct: 217 DKLKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQR 276
Query: 62 KESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKN 119
++ + IK+ + + ++L QI+ C +E S L+ A SL + F + KN
Sbjct: 277 RQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKN 334
>gi|4557753 midline 1 [Homo sapiens]
Length = 667
Score = 55.5 bits (132), Expect = 2e-08
Identities = 32/118 (27%), Positives = 60/118 (50%)
Query: 2 DSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEV 61
D K+ L+ ++ L +N E++ + L T + V+ N+S ++L EE D L I+ +
Sbjct: 217 DKLKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQR 276
Query: 62 KESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKN 119
++ + IK+ + + ++L QI+ C +E S L+ A SL + F + KN
Sbjct: 277 RQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKN 334
>gi|15451852 midline 1 [Homo sapiens]
Length = 667
Score = 55.5 bits (132), Expect = 2e-08
Identities = 32/118 (27%), Positives = 60/118 (50%)
Query: 2 DSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEV 61
D K+ L+ ++ L +N E++ + L T + V+ N+S ++L EE D L I+ +
Sbjct: 217 DKLKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQR 276
Query: 62 KESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKN 119
++ + IK+ + + ++L QI+ C +E S L+ A SL + F + KN
Sbjct: 277 RQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKN 334
>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
Length = 400
Score = 55.1 bits (131), Expect = 2e-08
Identities = 31/111 (27%), Positives = 59/111 (53%)
Query: 12 ISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKESMINCIKQ 71
I+ L ND +Q I + + +++NS L++ F+SL ++L+E K ++ + +
Sbjct: 220 IAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAR 279
Query: 72 EQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKNCIN 122
EQ K Q ++ I Q + LE S +L+E A +S++ + + + K IN
Sbjct: 280 EQEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELIN 330
>gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens]
Length = 550
Score = 47.8 bits (112), Expect = 3e-06
Identities = 26/112 (23%), Positives = 56/112 (50%)
Query: 5 KEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKES 64
K L + ++ L+++ E + F+ L + ++ +QENS + L + D+L L+ K
Sbjct: 274 KSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQ 333
Query: 65 MINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKV 116
++ + +E K + ++ QIS C L + L+E+ + +P F ++
Sbjct: 334 LLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQI 385
>gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens]
Length = 710
Score = 47.8 bits (112), Expect = 3e-06
Identities = 26/112 (23%), Positives = 56/112 (50%)
Query: 5 KEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKES 64
K L + ++ L+++ E + F+ L + ++ +QENS + L + D+L L+ K
Sbjct: 274 KSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQ 333
Query: 65 MINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKV 116
++ + +E K + ++ QIS C L + L+E+ + +P F ++
Sbjct: 334 LLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQI 385
>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
Length = 783
Score = 45.8 bits (107), Expect = 1e-05
Identities = 26/112 (23%), Positives = 55/112 (49%)
Query: 5 KEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKES 64
K L + ++ +++K E + F+ L + L+ +QEN + + L + D+L L K
Sbjct: 348 KAQLSQALNGVSDKAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQKAK 407
Query: 65 MINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKV 116
++ + +E+ K + + QI+ C L S L+E+ + +P F ++
Sbjct: 408 LLTKVTKEREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKENDPSGFLQI 459
>gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens]
Length = 728
Score = 44.3 bits (103), Expect = 4e-05
Identities = 23/90 (25%), Positives = 44/90 (48%)
Query: 5 KEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKES 64
KE L + I L K ++++ I L+ +K + N E F+ L+ +L+E K S
Sbjct: 257 KEKLSKDIDYLIGKESQVKSQISELNLLMKETECNGERAKEEAITHFEKLFEVLEERKSS 316
Query: 65 MINCIKQEQARKSQELQSQISQCNNALENS 94
++ I + + + Q+Q+ + LEN+
Sbjct: 317 VLKAIDSSKKLRLDKFQTQMEEYQGLLENN 346
>gi|55741632 fibronectin type III and SPRY domain containing 2 [Homo
sapiens]
Length = 749
Score = 40.8 bits (94), Expect = 4e-04
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
++S K+ + + + L + E++NF + L V+EN + ++ + L +
Sbjct: 209 LESAKDEIHKNMYKLEKQIIEMENFANHLEEVFITVEENFGKQEQNFESHYNEILETLAQ 268
Query: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLE 99
E I + +++ K + L Q+ C L+ +EL+E
Sbjct: 269 KYEEKIQALGEKKKEKLEALYGQLVSCGENLDTCKELME 307
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 40.0 bits (92), Expect = 7e-04
Identities = 25/119 (21%), Positives = 55/119 (46%)
Query: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
++ K ALQR + + + ++ I + + +QE + L+++ F+ L L +
Sbjct: 155 VEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQ 214
Query: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKN 119
K+++++ ++ K + LQSQ+ E+ FA ++L + E V K+
Sbjct: 215 RKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKH 273
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 40.0 bits (92), Expect = 7e-04
Identities = 25/119 (21%), Positives = 55/119 (46%)
Query: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
++ K ALQR + + + ++ I + + +QE + L+++ F+ L L +
Sbjct: 155 VEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQERKAEALAQISAAFEDLEQALQQ 214
Query: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHKN 119
K+++++ ++ K + LQSQ+ E+ FA ++L + E V K+
Sbjct: 215 RKQALVSDLETICGAKQKVLQSQLDTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKH 273
>gi|219555661 intraflagellar transport 81-like isoform 1 [Homo
sapiens]
Length = 676
Score = 39.3 bits (90), Expect = 0.001
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 15/136 (11%)
Query: 1 MDSQKEALQRIISTLANKN-----DEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLY 55
+ + E +Q+ + T+ K Q ++ + V E L ++ E LY
Sbjct: 435 LKQRHENIQQQLQTMEEKKGISGYSYTQEELERVSALKSEVDEMKGRTLDDMSEMVKKLY 494
Query: 56 SILDEVKESMINCIK---------QEQARKSQELQSQISQCNNALENSEELLEFATRSLD 106
S++ E K ++ + IK QE ++ E +SQ C LE++ LE R L
Sbjct: 495 SLVSEKKSALASVIKELRQLRQKYQELTQECDEKKSQYDSCAAGLESNRSKLEQEVRRLR 554
Query: 107 IKEPEEFSKVH-KNCI 121
+ +E S+ H NC+
Sbjct: 555 EECLQEESRYHYTNCM 570
>gi|32526901 intraflagellar transport 81-like isoform 1 [Homo
sapiens]
Length = 676
Score = 39.3 bits (90), Expect = 0.001
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 15/136 (11%)
Query: 1 MDSQKEALQRIISTLANKN-----DEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLY 55
+ + E +Q+ + T+ K Q ++ + V E L ++ E LY
Sbjct: 435 LKQRHENIQQQLQTMEEKKGISGYSYTQEELERVSALKSEVDEMKGRTLDDMSEMVKKLY 494
Query: 56 SILDEVKESMINCIK---------QEQARKSQELQSQISQCNNALENSEELLEFATRSLD 106
S++ E K ++ + IK QE ++ E +SQ C LE++ LE R L
Sbjct: 495 SLVSEKKSALASVIKELRQLRQKYQELTQECDEKKSQYDSCAAGLESNRSKLEQEVRRLR 554
Query: 107 IKEPEEFSKVH-KNCI 121
+ +E S+ H NC+
Sbjct: 555 EECLQEESRYHYTNCM 570
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 38.1 bits (87), Expect = 0.003
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 34 KGVQENSSNILSELDEEFDSLYSILDEVKESMINCIKQEQARKSQELQSQISQCNN---A 90
K +QE LSELD+ S S+L+E +++ I IK+E + LQ+Q+ + N A
Sbjct: 2217 KQIQEKQGQ-LSELDKLLSSFKSLLEEKEQAEIQ-IKEESKTAVEMLQNQLKELNEAVAA 2274
Query: 91 LENSEELLEFATRSLDIKEPEE 112
L +E+++ +SLD EE
Sbjct: 2275 LCGDQEIMKATEQSLDPPIEEE 2296
Score = 33.9 bits (76), Expect = 0.049
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
Query: 10 RIISTLANKNDEI-QNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKESMINC 68
R+ + + KN I QN +D+L +L E+ + S+L ++ + L I E++E+++
Sbjct: 815 RLEADQSPKNSAILQNRVDSLEFSL----ESQKQMNSDLQKQCEELVQIKGEIEENLMKA 870
Query: 69 IKQEQ---ARKSQEL----------QSQISQCNNALENSEELLEFATRSLDIKEPE 111
+ Q A SQ + Q+ +++ +ALEN E+ L+ ++ ++ E
Sbjct: 871 EQMHQSFVAETSQRISKLQEDTSAHQNVVAETLSALENKEKELQLLNDKVETEQAE 926
Score = 33.5 bits (75), Expect = 0.064
Identities = 26/123 (21%), Positives = 64/123 (52%), Gaps = 14/123 (11%)
Query: 18 KNDEIQNFIDTLHHTLKGVQENSSNILSELDE---EFDSLYSILDEVKESM--------- 65
+ND +++ ++ L L+ +EN ++ + + E ++L + ++E+ S+
Sbjct: 2148 ENDSLKDKVENLERELQMSEENQELVILDAENSKAEVETLKTQIEEMARSLKVFELDLVT 2207
Query: 66 INCIKQEQARKSQELQSQISQCNNALENSEELLEFATRS-LDIKEPEEFS-KVHKNCINT 123
+ K+ ++ QE Q Q+S+ + L + + LLE ++ + IKE + + ++ +N +
Sbjct: 2208 LRSEKENLTKQIQEKQGQLSELDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKE 2267
Query: 124 LNK 126
LN+
Sbjct: 2268 LNE 2270
Score = 32.7 bits (73), Expect = 0.11
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 12/96 (12%)
Query: 8 LQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEV-----K 62
L++ I L +KN +Q+ TL+ +Q + N+ +EL+ S +++V K
Sbjct: 2565 LEQKIQVLQSKNASLQD-------TLEVLQSSYKNLENELELTKMDKMSFVEKVNKMTAK 2617
Query: 63 ESMINCIKQEQARKSQELQSQISQCNNALENSEELL 98
E+ + E A+K+ ELQ ++S N L +LL
Sbjct: 2618 ETELQREMHEMAQKTAELQEELSGEKNRLAGELQLL 2653
Score = 31.2 bits (69), Expect = 0.32
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 18/116 (15%)
Query: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
+++ E +Q L N+ Q I L L V + + ELD + LD+
Sbjct: 1921 LEADLEVVQTEKLCLEKDNENKQKVIVCLEEELSVVTSERNQLRGELDT-MSKKTTALDQ 1979
Query: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSE-------ELLEFATRSLDIKE 109
+ E M K+QEL+S S+C + ++ +E ELL+ T S D+ E
Sbjct: 1980 LSEKM--------KEKTQELESHQSECLHCIQVAEAEVKEKTELLQ--TLSSDVSE 2025
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 37.4 bits (85), Expect = 0.004
Identities = 26/106 (24%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
Query: 2 DSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEV 61
+S+ ALQ + TL+N+N + + I+ L +L ++ + + L E D+L L+E
Sbjct: 447 ESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQRA----AILQTEVDALRLRLEE- 501
Query: 62 KESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDI 107
KES +N ++ ++ Q+L + + + +++LE R +++
Sbjct: 502 KESFLN----KKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINV 543
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 37.0 bits (84), Expect = 0.006
Identities = 25/107 (23%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNI---LSELDEEFDSLYSI 57
+ Q + LQR+ L + E++ ID + ++ + ++ SNI ++++F +
Sbjct: 1207 LGEQIDNLQRVKQKLEKEKSELKMEIDDMASNIEALSKSKSNIERTCRTVEDQFSEI-KA 1265
Query: 58 LDEVKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRS 104
DE + +I+ + ++AR LQ+Q + ++ +E E L+ T+S
Sbjct: 1266 KDEQQTQLIHDLNMQKAR----LQTQNGELSHRVEEKESLISQLTKS 1308
Score = 27.7 bits (60), Expect = 3.5
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 3 SQKEALQRIIST----LANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSIL 58
+QKE+ R +ST + N +E+ + ++TL K +QE S++ ++ E +L
Sbjct: 1474 AQKES--RSLSTELFKMRNAYEEVVDQLETLRRENKNLQEEISDLTEQIAETGKNL---- 1527
Query: 59 DEVKESMINCIKQEQARKSQELQSQISQCNNALENSE 95
+ E ++QE++ +LQ + + +LE+ E
Sbjct: 1528 -QEAEKTKKLVEQEKS----DLQVALEEVEGSLEHEE 1559
>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
Length = 468
Score = 36.2 bits (82), Expect = 0.010
Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
+ Q LQ++IST + K E++ ++ N EL EF+ L LD
Sbjct: 151 LKKQLADLQKLISTQSKKPLELREMVE--------------NQRQELSSEFEHLNQFLDR 196
Query: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKV 116
++++++ + +E+ Q+L + I+ +N + L ++ E E S++
Sbjct: 197 EQQAVLSRLAEEEKDNQQKLSANITAFSNYSATLKSQLSKVVELSELSELELLSQI 252
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 35.4 bits (80), Expect = 0.017
Identities = 29/148 (19%), Positives = 65/148 (43%), Gaps = 22/148 (14%)
Query: 3 SQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVK 62
S+KE L I L +N E + + L Q +I+S+L ++ + + +++
Sbjct: 488 SEKETLIAEIEELDRQNQEATKHMILIKDQLSKQQNEGDSIISKLKQDLNDEKKRVHQLE 547
Query: 63 ESMINCIKQEQARKSQELQSQIS---------QCNNALEN--------SEELLEFATRSL 105
+ ++ K+ +K + +QS+++ + + +EN E + +L
Sbjct: 548 DDKMDITKELDVQKEKLIQSEVALNDLHLTKQKLEDKVENLVDQLNKSQESNVSIQKENL 607
Query: 106 DIKE-----PEEFSKVHKNCINTLNKGS 128
++KE EE S++ + +LN+ S
Sbjct: 608 ELKEHIRQNEEELSRIRNELMQSLNQDS 635
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 35.0 bits (79), Expect = 0.022
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 5 KEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEE----FDSLYSILDE 60
+E L++ L NKN+E+Q LH L+ ++ S+ L EL++E D + +
Sbjct: 2209 EEQLEQFREELENKNEEVQQ----LHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLA 2264
Query: 61 VKESMINCIKQEQ------ARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEE 112
+KES + + A+ QE + +I Q N + ++ L+ T + I+E E
Sbjct: 2265 IKESDAMSTQDQHVLFGKFAQIIQEKEVEIDQLNEQVTKLQQQLKITTDNKVIEEKNE 2322
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 35.0 bits (79), Expect = 0.022
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 5 KEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEE----FDSLYSILDE 60
+E L++ L NKN+E+Q LH L+ ++ S+ L EL++E D + +
Sbjct: 2201 EEQLEQFREELENKNEEVQQ----LHMQLEIQKKESTTRLQELEQENKLFKDDMEKLGLA 2256
Query: 61 VKESMINCIKQEQ------ARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEE 112
+KES + + A+ QE + +I Q N + ++ L+ T + I+E E
Sbjct: 2257 IKESDAMSTQDQHVLFGKFAQIIQEKEVEIDQLNEQVTKLQQQLKITTDNKVIEEKNE 2314
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 35.0 bits (79), Expect = 0.022
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 21/115 (18%)
Query: 3 SQKEALQRIISTLANKNDEIQNFIDTLHHTLKGV-------QENSSNILS-------ELD 48
S KE +++ + + +Q I H K + Q+ +++ + E
Sbjct: 3559 SMKERCNKLLQKVQKNKELVQTEIQERHSFTKEIIALKNFFQQTTTSFQNMAFQDHPEKS 3618
Query: 49 EEFDSLYSILDEVKESMINCIKQEQARKSQ-------ELQSQISQCNNALENSEE 96
E+F+ L SIL + K + N +++ + + S+ E++SQ+ +C ALE+ +E
Sbjct: 3619 EQFEELQSILKKGKLTFENIMEKLRIKYSEMYTIVPAEIESQVEECRKALEDIDE 3673
Score = 28.5 bits (62), Expect = 2.1
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 1 MDSQKEALQRIISTLANKN---DEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSI 57
+D + LQ ++ L + N D++ ++++ HTL +E S N+ +LD ++ +
Sbjct: 4932 IDHELHRLQALLKHLLSYNRDSDQLTKWLESSQHTLNYWKEQSLNVSQDLDTIRSNINNF 4991
Query: 58 LDEVKE 63
+ KE
Sbjct: 4992 FEFSKE 4997
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,611,630
Number of Sequences: 37866
Number of extensions: 175923
Number of successful extensions: 1591
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 183
Number of HSP's that attempted gapping in prelim test: 1336
Number of HSP's gapped (non-prelim): 433
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.