Guide to the Human Genome
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Name: AGXT2L1 Sequence: fasta or formatted (493aa) NCBI GI: 226442705
Description:

alanine-glyoxylate aminotransferase 2-like 1 isoform 2

Referenced in:

Amino Acid Biosynthesis and Selected Derivatives

Other entries for this name:
alt prot [441aa] alanine-glyoxylate aminotransferase 2-like 1 isoform 3
alt prot [499aa] alanine-glyoxylate aminotransferase 2-like 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         38           2
 C cysteine            2.0         10           1
 D aspartate           5.9         29           1
 E glutamate           6.7         33           2
 F phenylalanine       4.1         20           2
 G glycine             7.3         36           2
 H histidine           3.9         19           1
 I isoleucine          5.9         29           2
 K lysine              8.7         43           2
 L leucine             7.9         39           2
 M methionine          2.8         14           1
 N asparagine          3.9         19           2
 P proline             3.7         18           2
 Q glutamine           3.2         16           1
 R arginine            4.7         23           1
 S serine              5.9         29           3
 T threonine           5.5         27           2
 V valine              6.7         33           2
 W tryptophan          0.2          1           1
 Y tyrosine            3.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alanine-glyoxylate aminotransferase 2-like 1 isofor... 
AGXT2L1               0.993   alanine-glyoxylate aminotransferase 2-like 1 isoform...
AGXT2L1               0.875   alanine-glyoxylate aminotransferase 2-like 1 isofor...
AGXT2L2               0.583   alanine-glyoxylate aminotransferase 2-like 2 
AGXT2                 0.240   alanine-glyoxylate aminotransferase 2 precursor [Hom...
OAT                   0.088   ornithine aminotransferase precursor 
ABAT                  0.064   4-aminobutyrate aminotransferase precursor 
ABAT                  0.064   4-aminobutyrate aminotransferase precursor 
ABAT                  0.064   4-aminobutyrate aminotransferase precursor 
SLMAP                 0.006   sarcolemma associated protein 
CDKL3                 0.005   cyclin-dependent kinase-like 3 isoform 1 
CDKL3                 0.005   cyclin-dependent kinase-like 3 isoform 2 
KIAA1586              0.005   hypothetical protein LOC57691 
C16orf62              0.005   hypothetical protein LOC57020 
ZNF534                0.004   zinc finger protein 534 isoform 2 
ZNF534                0.004   zinc finger protein 534 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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